Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0628
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.82 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.8  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.6  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 357 VEISRDSVVTVTDNNMADLLVNSFFTGYTESVIY 458
           V + R   V   D+N+  ++ N+FF  +T +VI+
Sbjct: 93  VHVFRKRRVNYKDSNIGLVVANAFFLLWTPAVIF 126


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 215 AKYPK*KYDPVIKENNKLAQFSQKYWYLPNFNNFKFVI 328
           A YP   Y+ V + N++      KYW      + K V+
Sbjct: 258 ADYPSPLYELVDRRNDENIDAQVKYWMSNGAPSAKIVL 295


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 524 QRSTSSIAHV*TYAEQQLKLKIVDNRFSISSKEGIYKEI 408
           +R    IAH     E+Q+K+   + R  +  +    KEI
Sbjct: 33  RRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEI 71


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 585 NRAVCEARNVCGCYWIKILVP 647
           N+   +A+NV  C W K   P
Sbjct: 368 NKGAEQAKNVLKCVWCKQSFP 388


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 524 QRSTSSIAHV*TYAEQQLKLKIVDNRFSISSKEGIYKEI 408
           +R    IAH     E+Q+K+   + R  +  +    KEI
Sbjct: 184 RRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEI 222


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 524 QRSTSSIAHV*TYAEQQLKLKIVDNRFSISSKEGIYKEI 408
           +R    IAH     E+Q+K+   + R  +  +    KEI
Sbjct: 243 RRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEI 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,656
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)