Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0626
(315 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 43 0.001
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 39 0.019
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 36 0.13
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 35 0.31
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 33 0.93
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 32 2.2
UniRef50_Q1D627 Cluster: Serine/threonine protein kinase; n=1; M... 31 5.0
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 31 5.0
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 31 5.0
UniRef50_A7RUB0 Cluster: Predicted protein; n=1; Nematostella ve... 30 8.7
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +2
Query: 188 AKKEAPSNEKPEIVKTHLRNMII 256
AKKEAP EKPE+VKTHLR+MII
Sbjct: 63 AKKEAPPMEKPEVVKTHLRDMII 85
Score = 40.3 bits (90), Expect = 0.008
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 55 GVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALGGKLR 183
GVDLDQLLDM EQLM+L GL+RK +L +LR
Sbjct: 19 GVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLR 61
Score = 39.1 bits (87), Expect = 0.019
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +3
Query: 258 VPEMVGSIVGIYNGKTFN 311
+PEMVGS+VG+YNGKTFN
Sbjct: 86 LPEMVGSMVGVYNGKTFN 103
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 39.1 bits (87), Expect = 0.019
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3
Query: 258 VPEMVGSIVGIYNGKTFN 311
VPEM+GS+VGIYNGK FN
Sbjct: 86 VPEMIGSVVGIYNGKAFN 103
Score = 36.7 bits (81), Expect = 0.10
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2
Query: 188 AKKEAPSNEKPEIVKTHLRNMII 256
AK AP NEKP V+TH+RNMII
Sbjct: 63 AKLAAPENEKPAPVRTHMRNMII 85
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 36.3 bits (80), Expect = 0.13
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 258 VPEMVGSIVGIYNGKTFN 311
VPEM+GS+VG++NGK FN
Sbjct: 97 VPEMIGSVVGVHNGKKFN 114
Score = 35.9 bits (79), Expect = 0.18
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 2/25 (8%)
Frame = +2
Query: 188 AKKEAPSNEK--PEIVKTHLRNMII 256
AKKEA K PE+VKTHLRNMII
Sbjct: 72 AKKEASDENKMKPEVVKTHLRNMII 96
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +1
Query: 19 KKAYFQGSSLTGGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALGGKLRPRQER 198
KK F+ S G ++D LL M N L +L + GLK++P+ L KLR ++
Sbjct: 17 KKRTFKKFSFRG-FNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKE 75
Query: 199 GS 204
S
Sbjct: 76 AS 77
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 35.1 bits (77), Expect = 0.31
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 188 AKKEAPSNEKPEIVKTHLRNMII 256
AKK AP EKPE+VKTH R++++
Sbjct: 82 AKKGAPPTEKPEVVKTHPRDVLL 104
Score = 33.5 bits (73), Expect = 0.93
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +1
Query: 16 QKKAYFQGSSLTGGVDLDQLLDMPNEQLMEL 108
QKK F+ + G VDLDQLLDM +EQ M+L
Sbjct: 20 QKKQTFRNFTQRG-VDLDQLLDMSSEQRMQL 49
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 258 VPEMVGSIVGIYNGKTF 308
+P MVGS VG+Y+GKTF
Sbjct: 105 LPAMVGSTVGVYDGKTF 121
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 33.5 bits (73), Expect = 0.93
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 258 VPEMVGSIVGIYNGKTF 308
+PE+VG IVG+YNGK F
Sbjct: 91 IPELVGGIVGVYNGKEF 107
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 188 AKKEAPSNEKPEIVKTHLRNMII 256
+K++ P+ EKP VKTH R+MI+
Sbjct: 68 SKEKCPAGEKPVPVKTHYRSMIV 90
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 258 VPEMVGSIVGIYNGKTFN 311
V EM+G IVG+YNGKT N
Sbjct: 37 VLEMIGYIVGVYNGKTLN 54
>UniRef50_Q1D627 Cluster: Serine/threonine protein kinase; n=1;
Myxococcus xanthus DK 1622|Rep: Serine/threonine protein
kinase - Myxococcus xanthus (strain DK 1622)
Length = 718
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +2
Query: 125 AGGSLVVLNVNQWHWGGSCVPAKKEAPSNEKPE 223
AG LV V W GG PA +EAP K E
Sbjct: 563 AGVGLVTFLVAAWQLGGDSAPAPEEAPREAKAE 595
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +2
Query: 191 KKEAPSNEKPEIVKTHLRNMII 256
++ A ++KP+IV+THLR+MII
Sbjct: 64 RRAAQPSQKPKIVRTHLRDMII 85
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 252 SFVPEMVGSIVGIYNGKTFNP 314
+ +PEMV + +YNGKTF P
Sbjct: 39 TIIPEMVSLTISVYNGKTFIP 59
>UniRef50_A7RUB0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 194
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 101 WN*CMPVRAGGSLVVLNVNQWHWGGSCVPAKKEAPSNEKPEIVKTHLRNMIIR 259
WN PV+ GSL L + SC + K ++K HLRN+ R
Sbjct: 7 WNILEPVKKEGSLCSLRGKRLCVDLSCWICEANGAKGLKTNVLKPHLRNLFFR 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,078,966
Number of Sequences: 1657284
Number of extensions: 6249684
Number of successful extensions: 15183
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15183
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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