Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0626
         (315 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   1.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   2.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   2.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   2.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   3.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.1  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    20   7.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           19   9.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    19   9.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    19   9.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    19   9.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    19   9.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    19   9.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           19   9.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    19   9.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    19   9.4  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -3

Query: 220 WLLIGRSLFLGGDAASPPMPLVYV*DHERTAGAH 119
           W  +      GG A  PP   +Y+       GAH
Sbjct: 88  WKYVNGEWVPGGKAEVPPSNPIYIHPESPNFGAH 121


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 162 GIGGEAASPPRKRLLPMRSQR 224
           G GG   SPP + L+   S R
Sbjct: 52  GFGGVQISPPNENLVVTSSNR 72


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 162 GIGGEAASPPRKRLLPMRSQR 224
           G GG   SPP + L+   S R
Sbjct: 53  GFGGVQISPPNENLVVTSSNR 73


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 162 GIGGEAASPPRKRLLPMRSQR 224
           G GG   SPP + L+   S R
Sbjct: 53  GFGGVQISPPNENLVVTSSNR 73


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 3.1
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +2

Query: 146 LNVNQWHW 169
           LN++ WHW
Sbjct: 203 LNLHHWHW 210


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 4/8 (50%), Positives = 7/8 (87%)
 Frame = +2

Query: 146 LNVNQWHW 169
           +N++ WHW
Sbjct: 203 INLHHWHW 210


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 183  TQLPPQCHWFTFKTTSEPPA 124
            T  P   +W T  TT  PPA
Sbjct: 1071 TTRPTTTNWPTQGTTIPPPA 1090



 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -3

Query: 91  HWAYQGADR 65
           HW Y GA++
Sbjct: 296 HWEYPGAEK 304


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 97  VAHWAYQGADRDQL 56
           + HW   GAD  +L
Sbjct: 237 ITHWILSGADPQKL 250


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 190 GGDAASPPMPL 158
           G   ASPPMP+
Sbjct: 113 GAVMASPPMPI 123


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 175 SPPMPLVYV*DHERTAGAHGHALIP 101
           SPP        H   A A GH L P
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQP 68


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 175 SPPMPLVYV*DHERTAGAHGHALIP 101
           SPP        H   A A GH L P
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQP 68


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 175 SPPMPLVYV*DHERTAGAHGHALIP 101
           SPP        H   A A GH L P
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQP 68


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 175 SPPMPLVYV*DHERTAGAHGHALIP 101
           SPP        H   A A GH L P
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQP 68


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 175 SPPMPLVYV*DHERTAGAHGHALIP 101
           SPP        H   A A GH L P
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQP 68


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 175 SPPMPLVYV*DHERTAGAHGHALIP 101
           SPP        H   A A GH L P
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQP 68


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 175 SPPMPLVYV*DHERTAGAHGHALIP 101
           SPP        H   A A GH L P
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQP 68


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 175 SPPMPLVYV*DHERTAGAHGHALIP 101
           SPP        H   A A GH L P
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQP 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,816
Number of Sequences: 336
Number of extensions: 1320
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)