Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0624
(602 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_49967| Best HMM Match : RBM1CTR (HMM E-Value=1.4) 31 0.72
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14) 31 0.95
SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8) 31 0.95
SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8) 31 0.95
SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57) 30 1.7
SB_46200| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_42623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19) 29 2.2
SB_36714| Best HMM Match : RBM1CTR (HMM E-Value=0.72) 29 2.2
SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5) 29 2.2
SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_21164| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 29 3.8
SB_50979| Best HMM Match : RBM1CTR (HMM E-Value=3.3) 29 3.8
SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 29 3.8
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_20712| Best HMM Match : DUF583 (HMM E-Value=4.4) 28 5.1
SB_6427| Best HMM Match : RBM1CTR (HMM E-Value=0.42) 28 5.1
SB_9722| Best HMM Match : EGF_CA (HMM E-Value=2.4e-06) 28 6.7
SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44) 27 8.8
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 27 8.8
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 35.5 bits (78), Expect = 0.033
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +1
Query: 301 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 480
+++ +LP K + LP S + PT P+ T PS + T TATLPS K
Sbjct: 240 QTTTTLPSTKQPTTTQQTTTTLP--STKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTK 297
Query: 481 EGA----LPSTCPSRQTRP 525
+ +T P+ T+P
Sbjct: 298 QPTTTQQTTATLPTPSTKP 316
Score = 32.7 bits (71), Expect = 0.24
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +1
Query: 301 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 480
+++ +LP K + +P S + PT + T LPS + T T TLPS K
Sbjct: 208 QTTTTLPSTKQPTTTQQTTTTIP--STKQPTTTQQTTTTLPSTKQPTTTQQTTTTLPSTK 265
Query: 481 EGALP----STCPSRQTRPRQGICAXTLPPLKR 567
+ P +T PS + TLP K+
Sbjct: 266 QPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQ 298
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 301 ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRK 480
+++ +LP K P P S + PT + T LPS + T TATLP+
Sbjct: 256 QTTTTLPSTKQPTTPQLTTTTFP--STKQPTTTQQTTATLPSTKQPTTTQQTTATLPTPS 313
Query: 481 EGALPSTCPSRQTRP 525
+ +RQ P
Sbjct: 314 TKPTTVSPTTRQPPP 328
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +1
Query: 376 SARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGA----LPSTCPSRQTRPRQGICA 543
S R PT + T LPS + T T T+PS K+ +T PS +
Sbjct: 199 STRQPTTNQQTTTTLPSTKQPTTTQQTTTTIPSTKQPTTTQQTTTTLPSTKQPTTTQQTT 258
Query: 544 XTLPPLKR 567
TLP K+
Sbjct: 259 TTLPSTKQ 266
>SB_49967| Best HMM Match : RBM1CTR (HMM E-Value=1.4)
Length = 334
Score = 31.1 bits (67), Expect = 0.72
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +1
Query: 340 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP---S 510
LP R+E+ P TL + P GT S T SR L S+C
Sbjct: 231 LPRRRESRAPNRPRPDLTLDESK----PEGTWQSGTES-TERRKSRFVSPLRSSCRWPLG 285
Query: 511 RQTRPRQGICAXTLPPLKRK 570
R +R R G CA T+PP +R+
Sbjct: 286 RASRSRDGACAPTMPPPERQ 305
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 30.7 bits (66), Expect = 0.95
Identities = 22/74 (29%), Positives = 27/74 (36%)
Frame = +1
Query: 304 SSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 483
S S P + HP P NP P S P P PS S ++ PS +
Sbjct: 468 SPISNPSPRPHPSPHPSSNPSPNPSPN----PSSDPSPNPSSNPSSDPSPNPSSNPSSEP 523
Query: 484 GALPSTCPSRQTRP 525
P + PS T P
Sbjct: 524 SPNPISNPSISTSP 537
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/63 (25%), Positives = 23/63 (36%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 516
P P NP S + P T P+ + S ++ PS + PS+ PS
Sbjct: 511 PSPNPSSNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSSNPSSEPSPNPSSNPSSD 570
Query: 517 TRP 525
P
Sbjct: 571 PSP 573
>SB_42474| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 221
Score = 30.7 bits (66), Expect = 0.95
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -1
Query: 425 LGKGHV*QRGRVGERALSRGRGFSFLPGRGCAFRRGR 315
L KG V +GR+G R RGRG + PGRG RGR
Sbjct: 83 LNKGSV--QGRLGARG--RGRGMARGPGRGMVGARGR 115
>SB_37798| Best HMM Match : Sec15 (HMM E-Value=1.8)
Length = 1007
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V V
Sbjct: 197 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYSWVSVATYSLVSV 256
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 257 ATYNWVSVATYSWVSV 272
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 5 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 64
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 65 ATYNWVSVATYNWVSV 80
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 21 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 80
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 81 ATYNWVSVATYNWVSV 96
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 37 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 96
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 97 ATYNWVSVATYNWVSV 112
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 53 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 112
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 113 ATYNWVSVATYNWVSV 128
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 69 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 128
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 129 ATYNWVSVATYNWVSV 144
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 85 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 144
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 145 ATYNWVSVATYNWVSV 160
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 101 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 160
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 161 ATYNWVSVATYNWVSV 176
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 117 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 176
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 177 ATYNWVSVATYNWVSV 192
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 133 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 192
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 193 ATYNWVSVATYNWVSV 208
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 149 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 208
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 209 ATYNWVSVATYNWVSV 224
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRVGDVLFDGV 317
WV ++WV + NW +NWV N V + ++ V + + V + V
Sbjct: 165 WVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSVATYNWVSV 224
Query: 316 GNRNFLN-DSYGFVDL 272
N+++ +Y +V +
Sbjct: 225 ATYNWVSVATYNWVSV 240
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGL 389
WV + WV + +W +NWV DN V +
Sbjct: 285 WVSVATYSWVSVATYSWVSVATYNWVSVATDNWVSV 320
>SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8)
Length = 627
Score = 30.7 bits (66), Expect = 0.95
Identities = 30/87 (34%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Frame = +1
Query: 313 SLPRRKAHPLPG--RKENPLPRESARSPTLPRCQTC--PLPS*RDCQGTSSRTATLPS-- 474
+LPR + LP + + LPR R TLPR TC LP +R TLP
Sbjct: 266 TLPRTRLDTLPRVVTRLDTLPRVVTRLDTLPRVVTCLDTLPR------VGTRLDTLPRIV 319
Query: 475 RKEGALPSTCPSRQTRPRQGICAXTLP 555
+ LP T PR G TLP
Sbjct: 320 TRLDTLPRVVTRLDTLPRVGTRLDTLP 346
Score = 27.5 bits (58), Expect = 8.8
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = +1
Query: 346 GRKENPLPRESARSPTLPRCQTCP--LPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 519
G + + LPR R TLPR T P LP C T R T + LP T
Sbjct: 171 GTRLDTLPRVVTRLDTLPRVVTRPDTLPRVVTCLDTLPRVGT----RLDTLPRVVTRLDT 226
Query: 520 RPRQGICAXTLP 555
PR TLP
Sbjct: 227 LPRVVTRLDTLP 238
>SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 409 FDNGVGLGNVHFHGVGDFLFYRVGDVLFDGVGN 311
FD+G+G+G H H YRV DV +DG G+
Sbjct: 793 FDDGIGVGIAHNH-------YRVSDVDYDGAGS 818
>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 430 RDCQGTSSRTATLPSRKEGALPSTCPSRQT-RPRQGICAXTLPPLKRKFMFQSKCTC 597
R CQ T S P + A+P CP+ QT RP C PL F+ KC C
Sbjct: 169 RSCQNTISSIPLKPGLEGYAMPRKCPTDQTGRPP---C-----PLDPFFIMPDKCKC 217
>SB_34181| Best HMM Match : Extensin_2 (HMM E-Value=0.57)
Length = 1121
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE 483
P P R NP P +A P+ PR + P P +G S +A PS E
Sbjct: 846 PTPLRPTNPTPAHAASKPSNPR-PSNPTPKHAMGEGVSDNSAEPPSPGE 893
>SB_46200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 307 SCSLPR--RKAHPLPGRKENPLPRESARSPTLPRCQT 411
+C LPR R + P PGR NP R + +P C T
Sbjct: 4 TCYLPREIRSSSPSPGRSANPHCRYNESNPRTQGCAT 40
>SB_42623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 316 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 495
+PR +P P +NP PR + ++P +PR P PS S + PS +G+ P
Sbjct: 52 IPRVTKNPFPRVTKNPFPRVT-KNP-IPRVTKEPHPSCDQRSHPSCDQGSHPSCDQGSHP 109
Query: 496 S 498
S
Sbjct: 110 S 110
>SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1883
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 271 GGPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS 450
GG R R S +PRR ++ P PR++A S +LP P+ R G
Sbjct: 1392 GGHMLRTVRRPLSAPMPRRSTSISDLARDLPTPRQAAHSASLPDLTMVQTPA-RFSNGEQ 1450
Query: 451 SRTATL---PSRKEGALPSTCPSRQTRPR 528
++ + L + + AL ++ ++ P+
Sbjct: 1451 AKPSKLRLDAPKPQSALVTSTKTKAVEPQ 1479
>SB_36714| Best HMM Match : RBM1CTR (HMM E-Value=0.72)
Length = 300
Score = 29.5 bits (63), Expect = 2.2
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Frame = +1
Query: 340 LPGRKENPLPRESARSPTLPRCQTC---PLPS*RDCQGTSSRTATLPSRKEGALPSTCPS 510
LPGR+ +R+P PR P GT S T SR L S+C
Sbjct: 168 LPGRQRRAT--HESRAPNRPRPDLTLDESKPEGAWQSGTES-TERRKSRFVSPLRSSCQG 224
Query: 511 ---RQTRPRQGICAXTLPPLKRKFM--FQSKCTCP 600
R +R G CA T+PP +R+ + + TCP
Sbjct: 225 PRGRASRSWDGACAPTMPPPERQALACLRHTHTCP 259
>SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5)
Length = 754
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 271 GGPQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTS 450
GG R R S +PRR ++ P PR++A S +LP P+ R G
Sbjct: 263 GGHMLRTVRRPLSAPMPRRSTSISDLARDLPTPRQAAHSASLPDLTMVQTPA-RFSNGEQ 321
Query: 451 SRTATL---PSRKEGALPSTCPSRQTRPR 528
++ + L + + AL ++ ++ P+
Sbjct: 322 AKPSKLRLDAPKPQSALVTSTKTKAVEPQ 350
>SB_31092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = +1
Query: 340 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 519
LP R N SP T PLP + TS+ +P+ +G + +T PS+Q+
Sbjct: 298 LPPRSSNEASETVIDSPL-----TDPLPDEEGGKVTSNEEEVVPAVSQGVVEATSPSQQS 352
Query: 520 RPRQGICAXTLPPL 561
G C L L
Sbjct: 353 LHDFGECPAWLTDL 366
>SB_16708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 516
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 319 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPS 498
P + HP PG P+ + +P +PR T PLP ++ SRT+T PS + PS
Sbjct: 141 PSFQDHPGPGVMPQMPPQMAPGTPLMPRIPTPPLP--QNMGLGLSRTST-PSPELRVSPS 197
Query: 499 TCPSRQTRPRQ 531
P+ +T Q
Sbjct: 198 --PTLKTESTQ 206
>SB_21164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -2
Query: 496 WVRHLLFDWVGLRYVNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFLFYRV 341
W R + W + WY + W R M D G+ ++G +YRV
Sbjct: 77 WYRVTIDQWYRVTIDQWYRVTIDQWYRVMIDQWYGVTIDQWYGATIDQWYRV 128
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 495
PLP + PLP + + P P PLP + G+ + S K+ LP
Sbjct: 450 PLPSDEPPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSPKQPPLP 502
>SB_50979| Best HMM Match : RBM1CTR (HMM E-Value=3.3)
Length = 167
Score = 28.7 bits (61), Expect = 3.8
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +1
Query: 340 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP---S 510
LPGR+ + P L ++ P + + GT S T SR L S+C
Sbjct: 38 LPGRQRRESRAPNRPRPDLTLDESKPKGAWQS--GTES-TEPRKSRFVSPLRSSCRWPRG 94
Query: 511 RQTRPRQGICAXTLPPLKRKFMFQSKCTCP 600
R +R + G C T+PP +R+ + + T P
Sbjct: 95 RASRSQDGACEPTMPPPERQALACLRHTTP 124
>SB_31589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 400 RCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ-TRPRQG 534
RC T + + + TS TA R+ + PST PSRQ + PR G
Sbjct: 9 RCDTGRETAPTESRATSLSTAGFCGRRSRSPPSTRPSRQGSAPRTG 54
>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
Length = 1605
Score = 28.7 bits (61), Expect = 3.8
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -2
Query: 526 GDGSVDWDMYWVRHLLFDWVGLRY--VNWYLDNLFNWVRDMFDNGVGLGNVHFHGVGDFL 353
G VDW + HL+ DWVGL + V+W L + V D G+G V + G+G+ +
Sbjct: 818 GHSVVDW--VGLGHLVVDWVGLGHSVVDWV--GLGHSVVDYV--GLGHSVVDYVGLGNSV 871
Query: 352 --FYRVGDVLFDGVGNRNFLNDSYG 284
+ +G + D VG N + D G
Sbjct: 872 VDWVGLGHSVVDWVGLGNSVLDWVG 896
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 334 HPLPGRKE-NPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 501
HP P +++ +P P + R P + Q P PS + Q S+ P + P T
Sbjct: 202 HPRPSQQQRHPRPSQQQRHPRPSQQQRYPRPSQQQRQPRPSQQQRYPRHNQQQTPET 258
>SB_20712| Best HMM Match : DUF583 (HMM E-Value=4.4)
Length = 369
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -1
Query: 494 GKAPSFRL-GRVAVRELVP*QSL*LGK-GHV*QRGRVGERALSRGRGFSFLPGRGCAFRR 321
G+ FR+ G V E V + GK GHV RG+V R +RG+ + +P G + R
Sbjct: 68 GRVTPFRVYGHVPTHERVSRRVHTHGKYGHVPARGKVYGRVPARGKVYGRVPTYGKVYER 127
Score = 28.3 bits (60), Expect = 5.1
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Frame = -1
Query: 554 GKVXAHIP*RG----RVCRLGHVLGKAPSFR--LGRVAVRELVP*QSL*LGKGH--V*QR 399
GKV +P RG RV G V + P+ GRV +E V + GK + V R
Sbjct: 102 GKVYGRVPARGKVYGRVPTYGKVYERVPARGKVYGRVPTQEKVYERVPARGKVNWRVPVR 161
Query: 398 GRVGERALSRGRGFSFLPGRGCAFRR 321
G+V R +RG+ + +P RG + R
Sbjct: 162 GKVYWRVPARGKVYGRVPARGKVYGR 187
>SB_6427| Best HMM Match : RBM1CTR (HMM E-Value=0.42)
Length = 315
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Frame = +1
Query: 361 PLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKE---GALPSTCP---SRQTR 522
P +R+P PR L + S T + RK +L S+C R +R
Sbjct: 154 PAAARESRAPNRPR-PDLTLDESKPEGAWQSGTESTERRKRRFVSSLRSSCRWPRGRASR 212
Query: 523 PRQGICAXTLPPLKRK 570
R G CA T+PP +R+
Sbjct: 213 SRDGACAPTMPPPERQ 228
>SB_9722| Best HMM Match : EGF_CA (HMM E-Value=2.4e-06)
Length = 673
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 387 PNPTPLSNMSLTQLKRLSRYQF 452
PNP P +NM+ +LK RY++
Sbjct: 524 PNPCPSTNMTCVELKGTPRYRY 545
>SB_18635| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44)
Length = 350
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 453 TYRNPTQSKRRCLTQYMSQSTDPSPSR 533
T R +QS+R C + S S P+P+R
Sbjct: 307 TIRRQSQSRRNCYSVISSNSPSPAPNR 333
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 343 PGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTR 522
P K P+E+ ++ + QT P S + + TS +T+ SRK S S +T
Sbjct: 42 PEDKLEDKPKENQQNKPEDKQQTSPKTSRKTSKKTSQKTSLNASRKTSRRTSLKRSLKTS 101
Query: 523 PR 528
P+
Sbjct: 102 PK 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,061,903
Number of Sequences: 59808
Number of extensions: 242226
Number of successful extensions: 905
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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