Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0624
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-ri... 34 0.33
AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-ri... 34 0.33
AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein. 34 0.33
AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein. 34 0.44
AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens ... 34 0.44
AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein. 34 0.44
AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isofo... 34 0.44
AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein. 32 1.4
AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein. 32 1.4
AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein. 32 1.4
M64676-1|AAA57263.1| 582|Homo sapiens potassium channel protein... 32 1.8
BC101769-1|AAI01770.1| 582|Homo sapiens potassium voltage-gated... 32 1.8
AL137790-1|CAI18831.1| 635|Homo sapiens potassium voltage-gated... 32 1.8
BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongatio... 31 3.1
AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor El... 31 3.1
BC122524-1|AAI22525.1| 134|Homo sapiens putative protein produc... 31 4.1
BC036022-1|AAH36022.1| 753|Homo sapiens transcription elongatio... 31 4.1
AK123191-1|BAC85553.1| 221|Homo sapiens protein ( Homo sapiens ... 30 5.4
AK096477-1|BAC04801.1| 810|Homo sapiens protein ( Homo sapiens ... 30 5.4
BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology... 30 7.2
AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens ... 30 7.2
AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein. 30 7.2
AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein. 30 7.2
U78305-1|AAB61637.1| 605|Homo sapiens Wip1 protein. 29 9.5
BT009780-1|AAP88782.1| 605|Homo sapiens protein phosphatase 1D ... 29 9.5
BC060877-1|AAH60877.1| 605|Homo sapiens protein phosphatase 1D ... 29 9.5
BC042418-1|AAH42418.1| 430|Homo sapiens PPM1D protein protein. 29 9.5
BC033893-1|AAH33893.1| 605|Homo sapiens protein phosphatase 1D ... 29 9.5
BC032382-1|AAH32382.1| 237|Homo sapiens LOC440456 protein protein. 29 9.5
BC016480-1|AAH16480.1| 605|Homo sapiens protein phosphatase 1D ... 29 9.5
AY044430-1|AAK95854.1| 621|Homo sapiens transcriptional co-repr... 29 9.5
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 29 9.5
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 29 9.5
AK027559-1|BAB55197.1| 1026|Homo sapiens protein ( Homo sapiens ... 29 9.5
AF418569-1|AAP97288.1| 1273|Homo sapiens MSIN3A protein. 29 9.5
>AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.33
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 316 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 495
LPR+ + P + P R + R LPR C +P R C P + LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482
Query: 496 STCPS 510
+ CPS
Sbjct: 483 APCPS 487
>AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.33
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +1
Query: 316 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 495
LPR+ + P + P R + R LPR C +P R C P + LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482
Query: 496 STCPS 510
+ CPS
Sbjct: 483 APCPS 487
>AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein.
Length = 440
Score = 34.3 bits (75), Expect = 0.33
Identities = 22/62 (35%), Positives = 25/62 (40%)
Frame = +1
Query: 340 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 519
LP P PR TLP T P P GT TLP+ + P T PS +T
Sbjct: 220 LPATGTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRT 279
Query: 520 RP 525
P
Sbjct: 280 LP 281
Score = 31.9 bits (69), Expect = 1.8
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = +1
Query: 340 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 519
LP + P P S TLP T P P GT TLP+ P T P+ +T
Sbjct: 226 LPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTPRT 285
Query: 520 RPRQG 534
P G
Sbjct: 286 LPTPG 290
Score = 31.1 bits (67), Expect = 3.1
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 313 SLPRRKAHPLPGRKENPLPRESARSP--TLPRCQTCPLPS*RDCQGTSSRTATLPSRKEG 486
+LP + P PG LP P T+P T P P T TLPS +
Sbjct: 225 TLPPPRTLPSPGT----LPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTL 280
Query: 487 ALPSTCPSRQTRPRQG 534
P T P+ T PR G
Sbjct: 281 PTPRTLPTPGTLPRPG 296
>AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.
Length = 1450
Score = 33.9 bits (74), Expect = 0.44
Identities = 25/78 (32%), Positives = 32/78 (41%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 516
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC---F 129
Query: 517 TRPRQGICAXTLPPLKRK 570
T P LPPL K
Sbjct: 130 TTPSTAAPDPVLPPLPAK 147
>AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ46197 fis, clone TESTI4007565. ).
Length = 140
Score = 33.9 bits (74), Expect = 0.44
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 292 CR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLP 423
CR S C P + P PG + P + PT RC+ P P
Sbjct: 10 CRLPSCCPCPCKTGDPGPGNRRRATPMWMPKGPTQERCRPYPPP 53
>AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.
Length = 1450
Score = 33.9 bits (74), Expect = 0.44
Identities = 25/78 (32%), Positives = 32/78 (41%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 516
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC---F 129
Query: 517 TRPRQGICAXTLPPLKRK 570
T P LPPL K
Sbjct: 130 TTPSTAAPDPVLPPLPAK 147
>AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isoform
a variant protein.
Length = 1474
Score = 33.9 bits (74), Expect = 0.44
Identities = 25/78 (32%), Positives = 32/78 (41%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 516
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 110 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC---F 164
Query: 517 TRPRQGICAXTLPPLKRK 570
T P LPPL K
Sbjct: 165 TTPSTAAPDPVLPPLPAK 182
>AF499137-1|AAQ07403.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 32.3 bits (70), Expect = 1.4
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Frame = +1
Query: 322 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 501
R+ A P ENP P R+P P P P R Q +A +P +P +
Sbjct: 767 RKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 826
Query: 502 ----CPSRQTRPRQGICAXTLPPLKRK 570
PS T PR + A P L R+
Sbjct: 827 PLPAGPSSCTSPRSPLPAPPRPFLYRR 853
>AF499136-1|AAQ07402.1| 903|Homo sapiens synaptopodin protein.
Length = 903
Score = 32.3 bits (70), Expect = 1.4
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Frame = +1
Query: 322 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 501
R+ A P ENP P R+P P P P R Q +A +P +P +
Sbjct: 767 RKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 826
Query: 502 ----CPSRQTRPRQGICAXTLPPLKRK 570
PS T PR + A P L R+
Sbjct: 827 PLPAGPSSCTSPRSPLPAPPRPFLYRR 853
>AB028952-1|BAA82981.2| 1015|Homo sapiens KIAA1029 protein protein.
Length = 1015
Score = 32.3 bits (70), Expect = 1.4
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Frame = +1
Query: 322 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPST 501
R+ A P ENP P R+P P P P R Q +A +P +P +
Sbjct: 879 RKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRS 938
Query: 502 ----CPSRQTRPRQGICAXTLPPLKRK 570
PS T PR + A P L R+
Sbjct: 939 PLPAGPSSCTSPRSPLPAPPRPFLYRR 965
>M64676-1|AAA57263.1| 582|Homo sapiens potassium channel protein
protein.
Length = 582
Score = 31.9 bits (69), Expect = 1.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 493 PSTCPSRQTRPRQGICAXTLPPLKRKFMFQSK 588
P C S +T PR C+ T PP + + M + K
Sbjct: 505 PMYCKSEETSPRDSTCSDTSPPAREEGMIERK 536
>BC101769-1|AAI01770.1| 582|Homo sapiens potassium voltage-gated
channel, Shaw-related subfamily, member 4 protein.
Length = 582
Score = 31.9 bits (69), Expect = 1.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 493 PSTCPSRQTRPRQGICAXTLPPLKRKFMFQSK 588
P C S +T PR C+ T PP + + M + K
Sbjct: 505 PMYCKSEETSPRDSTCSDTSPPAREEGMIERK 536
>AL137790-1|CAI18831.1| 635|Homo sapiens potassium voltage-gated
channel, Shaw-related subfamily, member 4 protein.
Length = 635
Score = 31.9 bits (69), Expect = 1.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 493 PSTCPSRQTRPRQGICAXTLPPLKRKFMFQSK 588
P C S +T PR C+ T PP + + M + K
Sbjct: 505 PMYCKSEETSPRDSTCSDTSPPAREEGMIERK 536
>BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongation
factor B polypeptide 3B (elongin A2) protein.
Length = 753
Score = 31.1 bits (67), Expect = 3.1
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 271 GGPQNRNC-R*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQ 441
G P+N R S RR A P ++ P PR +R P R C + P S R +
Sbjct: 111 GFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YR 169
Query: 442 GTSSRTATLPSRK--EGALPSTCPSR-QTRPRQG 534
+ +RTA LP + E A P P R T QG
Sbjct: 170 ASPTRTAPLPMPEGPEPAAPGKQPGRGHTHAAQG 203
>AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor
Elongin A2 protein.
Length = 753
Score = 31.1 bits (67), Expect = 3.1
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = +1
Query: 271 GGPQNRNC-R*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQ 441
G P+N R S RR A P ++ P PR +R P R C + P S R +
Sbjct: 111 GFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YR 169
Query: 442 GTSSRTATLPSRK--EGALPSTCPSR-QTRPRQG 534
+ +RTA LP + E A P P R T QG
Sbjct: 170 ASPTRTAPLPMPEGPEPAAPGKQPGRGHTHAAQG 203
>BC122524-1|AAI22525.1| 134|Homo sapiens putative protein product
of Nbla00301 protein.
Length = 134
Score = 30.7 bits (66), Expect = 4.1
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Frame = +1
Query: 322 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD-------CQGTS-SRTATLPSR 477
R ++ P PG L S R P P QT PS CQ S +R A LP+R
Sbjct: 6 RNQSSPPPG----DLHFRSLRLPVTPERQTADWPSCLKTQPDSDACQPASPTRAAALPTR 61
Query: 478 KEGALPSTCP-SRQTRPRQGI 537
G P CP + ++R GI
Sbjct: 62 MGGTTPPRCPRAERSRGSTGI 82
>BC036022-1|AAH36022.1| 753|Homo sapiens transcription elongation
factor B polypeptide 3B (elongin A2) protein.
Length = 753
Score = 30.7 bits (66), Expect = 4.1
Identities = 32/94 (34%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Frame = +1
Query: 271 GGPQNRNC-R*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQ 441
G P+N R S RR A P ++ P PR +R P R C + P S R +
Sbjct: 111 GFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YR 169
Query: 442 GTSSRTATL--PSRKEGALPSTCPSR-QTRPRQG 534
+ +RTA L P E A P P R T QG
Sbjct: 170 ASPTRTAPLRMPEGPEPAAPGKQPGRGHTHAAQG 203
>AK123191-1|BAC85553.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ41197 fis, clone BRACE2045947. ).
Length = 221
Score = 30.3 bits (65), Expect = 5.4
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 370 RESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEG---ALPSTCPSRQ 516
R + + P CQ CP PS T SR ++ P R G ALP R+
Sbjct: 114 RRQRPAASRPHCQQCPWPSEPRRSSTPSRPSSTPPRPAGQGQALPQILIGRE 165
>AK096477-1|BAC04801.1| 810|Homo sapiens protein ( Homo sapiens
cDNA FLJ39158 fis, clone OCBBF2002086, highly similar to
Transcriptional regulator, SIN3A. ).
Length = 810
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1
Query: 328 KAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP 507
+ H +P P P+ + P+ P Q+ P P+ Q ++ + PS+ + P+
Sbjct: 207 QVHQIPTHGTQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSK-PSQLQAHTPA--- 262
Query: 508 SRQTRPRQGICAXTLPPLK 564
S+QT P + PP++
Sbjct: 263 SQQTPPLPPYASPRSPPVQ 281
>BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology
domain containing 1 protein.
Length = 780
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 337 PLPGR--KENPLPRESARSPTLPRCQTCPLP 423
P PGR +E+P P++ P+ P Q PLP
Sbjct: 326 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 356
>AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens cDNA
FLJ43332 fis, clone NT2RI3006340, highly similar to
Myomesin 1. ).
Length = 1685
Score = 29.9 bits (64), Expect = 7.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 319 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 435
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein.
Length = 1685
Score = 29.9 bits (64), Expect = 7.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 319 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 435
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein.
Length = 797
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 337 PLPGR--KENPLPRESARSPTLPRCQTCPLP 423
P PGR +E+P P++ P+ P Q PLP
Sbjct: 344 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 374
>U78305-1|AAB61637.1| 605|Homo sapiens Wip1 protein.
Length = 605
Score = 29.5 bits (63), Expect = 9.5
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG----TSSRTATLPSRKEGALPSTC 504
P P +E P PR S P PR LP + G ++R A P GA P+
Sbjct: 31 PEPTAEEKPSPRRSLSQPLPPRPSPAALPG-GEVSGKGPAVAAREARDPLPDAGASPA-- 87
Query: 505 PSRQTRPRQGI 537
PSR R R +
Sbjct: 88 PSRCCRRRSSV 98
>BT009780-1|AAP88782.1| 605|Homo sapiens protein phosphatase 1D
magnesium-dependent, delta isoform protein.
Length = 605
Score = 29.5 bits (63), Expect = 9.5
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG----TSSRTATLPSRKEGALPSTC 504
P P +E P PR S P PR LP + G ++R A P GA P+
Sbjct: 31 PEPTAEEKPSPRRSLSQPLPPRPSPAALPG-GEVSGKGPAVAAREARDPLPDAGASPA-- 87
Query: 505 PSRQTRPRQGI 537
PSR R R +
Sbjct: 88 PSRCCRRRSSV 98
>BC060877-1|AAH60877.1| 605|Homo sapiens protein phosphatase 1D
magnesium-dependent, delta isoform protein.
Length = 605
Score = 29.5 bits (63), Expect = 9.5
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG----TSSRTATLPSRKEGALPSTC 504
P P +E P PR S P PR LP + G ++R A P GA P+
Sbjct: 31 PEPTAEEKPSPRRSLSQPLPPRPSPAALPG-GEVSGKGPAVAAREARDPLPDAGASPA-- 87
Query: 505 PSRQTRPRQGI 537
PSR R R +
Sbjct: 88 PSRCCRRRSSV 98
>BC042418-1|AAH42418.1| 430|Homo sapiens PPM1D protein protein.
Length = 430
Score = 29.5 bits (63), Expect = 9.5
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG----TSSRTATLPSRKEGALPSTC 504
P P +E P PR S P PR LP + G ++R A P GA P+
Sbjct: 31 PEPTAEEKPSPRRSLSQPLPPRPSPAALPG-GEVSGKGPAVAAREARDPLPDAGASPA-- 87
Query: 505 PSRQTRPRQGI 537
PSR R R +
Sbjct: 88 PSRCCRRRSSV 98
>BC033893-1|AAH33893.1| 605|Homo sapiens protein phosphatase 1D
magnesium-dependent, delta isoform protein.
Length = 605
Score = 29.5 bits (63), Expect = 9.5
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG----TSSRTATLPSRKEGALPSTC 504
P P +E P PR S P PR LP + G ++R A P GA P+
Sbjct: 31 PEPTAEEKPSPRRSLSQPLPPRPSPAALPG-GEVSGKGPAVAAREARDPLPDAGASPA-- 87
Query: 505 PSRQTRPRQGI 537
PSR R R +
Sbjct: 88 PSRCCRRRSSV 98
>BC032382-1|AAH32382.1| 237|Homo sapiens LOC440456 protein protein.
Length = 237
Score = 29.5 bits (63), Expect = 9.5
Identities = 31/84 (36%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Frame = +1
Query: 310 CSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQ---GTSSRTATLPSRK 480
C L R+ P P RK P R S P LP T PL S R Q GT + A P
Sbjct: 121 CQLRFRETSPAPPRKPRP-GRWS--GPNLPAPPTRPLGSLRPAQQTRGTLDKVAKEPYGS 177
Query: 481 EGALPSTCPSRQTRPRQGICAXTL 552
G P+ PS +PRQ + L
Sbjct: 178 PGLDPA--PS-VPQPRQAAVSWPL 198
>BC016480-1|AAH16480.1| 605|Homo sapiens protein phosphatase 1D
magnesium-dependent, delta isoform protein.
Length = 605
Score = 29.5 bits (63), Expect = 9.5
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 337 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG----TSSRTATLPSRKEGALPSTC 504
P P +E P PR S P PR LP + G ++R A P GA P+
Sbjct: 31 PEPTAEEKPSPRRSLSQPLPPRPSPAALPG-GEVSGKGPAVAAREARDPLPDAGASPA-- 87
Query: 505 PSRQTRPRQGI 537
PSR R R +
Sbjct: 88 PSRCCRRRSSV 98
>AY044430-1|AAK95854.1| 621|Homo sapiens transcriptional
co-repressor Sin3A protein.
Length = 621
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1
Query: 328 KAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP 507
+ H +P P P+ + P+ P Q+ P P+ Q ++ + PS+ + P+
Sbjct: 208 QVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSK-PSQLQAHTPA--- 263
Query: 508 SRQTRPRQGICAXTLPPLK 564
S+QT P + PP++
Sbjct: 264 SQQTPPLPPYASPRSPPVQ 282
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.5 bits (63), Expect = 9.5
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 277 PQNRNCR*ESSCSLPRRKAHPLPG-RKENPLPRESARSPTLPRCQTCPLP-S*RDCQGTS 450
P R R S PRR+ P P R+ P P RSP+ PR + P+
Sbjct: 562 PPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS-PRRYSPPIQRRYSPSPPPK 620
Query: 451 SRTAT-LPSRKEGALPSTCPSRQ 516
RTA+ P K A PS P R+
Sbjct: 621 RRTASPPPPPKRRASPSPPPKRR 643
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.5 bits (63), Expect = 9.5
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +1
Query: 277 PQNRNCR*ESSCSLPRRKAHPLPG-RKENPLPRESARSPTLPRCQTCPLP-S*RDCQGTS 450
P R R S PRR+ P P R+ P P RSP+ PR + P+
Sbjct: 562 PPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPS-PRRYSPPIQRRYSPSPPPK 620
Query: 451 SRTAT-LPSRKEGALPSTCPSRQ 516
RTA+ P K A PS P R+
Sbjct: 621 RRTASPPPPPKRRASPSPPPKRR 643
>AK027559-1|BAB55197.1| 1026|Homo sapiens protein ( Homo sapiens
cDNA FLJ14653 fis, clone NT2RP2002252, highly similar to
Mus musculus (clone pVZmSin3A9) mSin3A9 mRNA. ).
Length = 1026
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1
Query: 328 KAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP 507
+ H +P P P+ + P+ P Q+ P P+ Q ++ + PS+ + P+
Sbjct: 207 QVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSK-PSQLQAHTPA--- 262
Query: 508 SRQTRPRQGICAXTLPPLK 564
S+QT P + PP++
Sbjct: 263 SQQTPPLPPYASPRSPPVQ 281
>AF418569-1|AAP97288.1| 1273|Homo sapiens MSIN3A protein.
Length = 1273
Score = 29.5 bits (63), Expect = 9.5
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1
Query: 328 KAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCP 507
+ H +P P P+ + P+ P Q+ P P+ Q ++ + PS+ + P+
Sbjct: 207 QVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQPAPQPPPAKVSK-PSQLQAHTPA--- 262
Query: 508 SRQTRPRQGICAXTLPPLK 564
S+QT P + PP++
Sbjct: 263 SQQTPPLPPYASPRSPPVQ 281
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,797,163
Number of Sequences: 237096
Number of extensions: 1230414
Number of successful extensions: 4168
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4152
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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