Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0623
(687 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 34 0.017
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 33 0.029
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.21
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.27
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.48
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 29 0.83
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 28 1.1
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 27 1.9
SPAC328.10c |rps502|rps5-2|40S ribosomal protein S5|Schizosaccha... 27 2.5
SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces p... 27 2.5
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 3.4
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 4.4
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 5.9
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 5.9
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.8
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 7.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 23 7.9
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 34.3 bits (75), Expect = 0.017
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Frame = +2
Query: 278 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 457
S+E + S QS +T + KT A+ T T + SA + T ++ +A
Sbjct: 226 SSESTIANSDQSSFITYESTQNPTANKTDASQQSTESTSS--SASAYSYITTLQTATTAQ 283
Query: 458 GLIRFRSAKTKK*Q-TDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTGAPSE 634
+ T T S P + S + S + P +A++ +S + AST A +
Sbjct: 284 QTTSENTYSTSGPNLTTSNTSPQISSTISSSSFIVESPSVALSTSSTTTITNASTPAANT 343
Query: 635 PFSRSETPT 661
SRS PT
Sbjct: 344 IISRSSKPT 352
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 33.5 bits (73), Expect = 0.029
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
Frame = +2
Query: 275 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
+S S+ PQS +ASS T +T S +S + +P+T S +
Sbjct: 468 VSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPS 527
Query: 455 CGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVN-----ITSVSRALPAST 619
+I S+ + S++ P S + S T+ I+ + +SVS L +ST
Sbjct: 528 SSII---SSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST 584
Query: 620 GAPSE---PFSRSETPTALVTAKT 682
+PS S S T + +A T
Sbjct: 585 SSPSSTSLSISSSSTSSTFSSAST 608
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.7 bits (66), Expect = 0.21
Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 3/128 (2%)
Frame = +2
Query: 311 SPLLTVR-DCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKT 487
SPL T CT S+ + + + PP +++ P + S+ G T
Sbjct: 276 SPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPST 335
Query: 488 KK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSV--SRALPASTGAPSEPFSRSETPT 661
T S + PP + T +P + + TS A +STG S P + T
Sbjct: 336 STSCTTSTSIPPTGNST--TPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSC 393
Query: 662 ALVTAKTP 685
T+ P
Sbjct: 394 TTSTSIPP 401
Score = 27.9 bits (59), Expect = 1.5
Identities = 37/169 (21%), Positives = 56/169 (33%)
Frame = +2
Query: 176 TTV*PN*KPAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLM 355
T V P P +T S STP P ++ G S SP T CT S+ +
Sbjct: 299 TPVTPTVPPTSTSSTSTPPPPAS-----------TSSTGTSSSPLPSTST--SCTTSTSI 345
Query: 356 KTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSP 535
+ + PP +++ P + S+ G T T S + PP +
Sbjct: 346 PPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNS 405
Query: 536 TLARSAVTLIPKIAVNITSVSRALPASTGAPSEPFSRSETPTALVTAKT 682
T +P + + + ST P + TP A T
Sbjct: 406 T--TPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTT 452
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.3 bits (65), Expect = 0.27
Identities = 33/160 (20%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Frame = +2
Query: 215 SLSTPQIPNXXXXXXXXXXXLSAERGHSL----SPQSPLLTVRDCTASSLMKTSATFSGT 382
SLST IP+ LS+ S S S +++ ++SS TS+T S +
Sbjct: 234 SLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSS 293
Query: 383 AGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTL 562
+ + P +++ ++ S +S + S+ + + ++ P S T++ S+ +
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTL---SSSSMSSSSSFSSSPTSSSSTISSSSSS- 349
Query: 563 IPKIAVNITSVSRALPASTGAPSEPFSRSETPTALVTAKT 682
P + + +S + + +S+ S S S T ++ +T+ +
Sbjct: 350 -PS-SSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSS 387
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.5 bits (63), Expect = 0.48
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 518 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTGAPSEPFSRSETPTALVTAKTP 685
P +RS +L S V LIP + + + S + PAS P S S + + V + P
Sbjct: 439 PSIRSLSLRPSQVPLIPPLKCDPNAFSASTPASGAVSRTPSSVSLSSLSNVNSSMP 494
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 28.7 bits (61), Expect = 0.83
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 389 TEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT-LARSAVTLI 565
T P S +LPT + S +S + QT +PP SPT + ++ ++
Sbjct: 135 TTFPSTTSITENLPTIDPTRSTRSSSHIQSLSPESKQTSDGHRPP--SPTSITTTSTSID 192
Query: 566 PKIAVNITSVSRALPASTGAPSEPFSRSETPT 661
P +A + S +T + P SR PT
Sbjct: 193 PSVAFSSKST-----LATTRTNAPLSRPSQPT 219
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = +1
Query: 148 ISCDKYWKCDN----GVAELKTCGNGLAFDATDS--KYLTENCDYLHN 273
+ CD+ W C+N G+ L C NG+ +D K L D L N
Sbjct: 30 LKCDRVWPCENCKKRGIPNL--CPNGILVSVSDKLIKLLLSRIDTLQN 75
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 27.5 bits (58), Expect = 1.9
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 680 SSQLPVPSASPILKTVPM 627
S++LPVPS +PIL T P+
Sbjct: 54 SNKLPVPSTNPILTTEPI 71
>SPAC328.10c |rps502|rps5-2|40S ribosomal protein
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 299 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 421
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 299 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 421
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 290 GHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
GH+ + S T TA+S + +SAT S T+ + + D+ T PAS+
Sbjct: 141 GHASASTSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASS 195
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 172 CDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 282
C N V LK NG + S+ L+E C Y N C
Sbjct: 374 CSNAVKNLKCSANGTPSGSKISQVLSELC-YYDNKAC 409
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 569 KIAVNITSVSRALP---ASTGAPSEPFSRSETPTA 664
KI +T +P AS+ PSE SR+ETPTA
Sbjct: 478 KIVNPVTHTEVVVPQKNASSPNPSETNSRAETPTA 512
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 308 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1191 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1238
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 308 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 454
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1273 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1320
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 500 TDSAAQPPVRSPTLARSAV 556
++SAA PPV SP L RS +
Sbjct: 479 SNSAASPPVSSPGLRRSHI 497
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 7.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 346 FPDENKCDVFWNCW 387
F D N D +WNCW
Sbjct: 350 FADRNFYDDWWNCW 363
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 23.0 bits (47), Expect(2) = 7.9
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +2
Query: 476 SAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTGAPSEPFSRSET 655
S T T A + P P L +PK+ S + A P S AP P S
Sbjct: 81 SLPTSSNNTQQAEERP-SMPALGGLFAGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRP 139
Query: 656 PTA 664
PT+
Sbjct: 140 PTS 142
Score = 20.6 bits (41), Expect(2) = 7.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 398 PPAISAAPDLPTTES 442
PP + AP LPT+ +
Sbjct: 73 PPVPTGAPSLPTSSN 87
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,822,840
Number of Sequences: 5004
Number of extensions: 58317
Number of successful extensions: 211
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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