Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0623
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    27   0.13 
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   2.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   3.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.3  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   8.3  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   8.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.3  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   8.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.3  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 444 GLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQS 331
           GL   G SGAALIA       +PE   +V I  D +++
Sbjct: 301 GLLCGGSSGAALIAALKIAKDIPEEKRMVIILPDGIRN 338


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 337 YGIFPDENKCDVFWNC 384
           YG FP++ K   ++NC
Sbjct: 59  YGEFPEDEKLKCYFNC 74


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
 Frame = +1

Query: 142 HHISCDKYWKCDNGV-----AELKTCGNGL-AFDATDSKYLTE 252
           H  SCD+ W  D G        ++ C   L  FD T  K L +
Sbjct: 134 HADSCDRLWVLDTGTIGIGNTTIQACPYTLNIFDLTSDKLLRQ 176


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
 Frame = -1

Query: 453 ADAGLSVVGKSGAALIAGGFSVPAV----PENVA 364
           + AG+ VVG + A+++AG  S+  V    PE++A
Sbjct: 9   SSAGVGVVGGTIASVVAGAASLTLVKAETPEHLA 42


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 512 AQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTGAPSEP 637
           +QPP        S V++   ++   +     LP S GAP  P
Sbjct: 378 SQPPPNFGVSQVSPVSMSALVSAVRSPAGGQLPPSAGAPMPP 419


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 5/19 (26%), Positives = 12/19 (63%)
 Frame = +1

Query: 157 DKYWKCDNGVAELKTCGNG 213
           + YW+C++   +++  G G
Sbjct: 63  ENYWQCNDKKTDIEETGRG 81


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 151 SCDKYWKCDNGVAEL 195
           +CD+ W  D GV ++
Sbjct: 119 ACDRLWGVDTGVDDI 133


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 250 ENCDYLHNVECGE 288
           E CDY  N+  GE
Sbjct: 40  EECDYYQNLNLGE 52


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 635 PFSRSETPTALVTAKTP 685
           PF  S   T +VTA TP
Sbjct: 4   PFLSSSVSTVIVTALTP 20


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 302  SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPD 424
            SP SP+L+VR    +  +  +ATF     T     +   PD
Sbjct: 1484 SPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRLHVWPD 1524


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 302  SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPD 424
            SP SP+L+VR    +  +  +ATF     T     +   PD
Sbjct: 1480 SPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRLHVWPD 1520


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,253
Number of Sequences: 438
Number of extensions: 4417
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)