Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0621
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.8  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 677 CFFKRVTFFKLLIVNC 630
           C+F R+    LLIV C
Sbjct: 55  CYFLRMVLIDLLIVGC 70


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3

Query: 679 LVFSKELLFLNY 644
           LVFS+ LLFL+Y
Sbjct: 146 LVFSEVLLFLDY 157


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 483 LVFTRRLLFFCFLM 442
           ++FT  LLF+C L+
Sbjct: 220 IIFTIHLLFYCVLI 233


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 364 DYTATIVALLTKRSNKNID 308
           DY + +  L+ +R+++NID
Sbjct: 259 DYPSPLYELVDRRNDENID 277


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 193 LNTRIEPQRRYNEFLRKHFFNCS*NG 270
           L  +IEPQ +  +F R   F C+  G
Sbjct: 328 LKAKIEPQVQTIDFGRPATFTCNFEG 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,667
Number of Sequences: 336
Number of extensions: 3532
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)