Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0620
         (488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   4.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   4.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   6.0  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -2

Query: 193 SNYANYNFAGFIFITRCYSFTVEINREHLLSMYFIRKIGTRLRF 62
           S+Y N + A F F+ R     + +   HL     I K  ++ R+
Sbjct: 413 SDYQNKSLAAFDFVARNSDTPIILWTSHLTQADVIEKYLSKARY 456


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 283 GGVAVVTIRETLELISQGGWRI 348
           G   ++   E +EL  +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 247 NRQSGGTHPRGLTRGPTTSN 188
           N  SG TH  G+     TSN
Sbjct: 168 NTMSGATHHGGIKSDSVTSN 187


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 381 WLLEPIDIHNVNAPPTLRYK 322
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 313 SHV*LQRLPHPSNRNALLL 257
           SH+   +LPHP+  ++ LL
Sbjct: 112 SHMQFMQLPHPAAAHSALL 130


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 390 GVKWLLEPIDIHNVNAPPT 334
           G  W L+    H+V AP T
Sbjct: 250 GHSWYLQSTSNHDVGAPAT 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,198
Number of Sequences: 336
Number of extensions: 3004
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)