Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0619
         (339 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.37 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   0.49 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   0.85 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   0.85 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    20   6.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   6.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   8.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 0.37
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = -2

Query: 272 LAQQHQLELADFCLWSAIGPLCGSGPVCRHIPPCHCSSVLNFFLGD 135
           L+Q H L    FC      P CG   +C H      ++++   L D
Sbjct: 541 LSQIHDLSPDQFCNGDNRPPDCGQNCMCTHQVDIPLNAIVEVVLVD 586


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 0.49
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -2

Query: 272 LAQQHQLELADFCLWSAIGPLCGSGPVCRHIPPCHCSSVLNFFLGDR 132
           L+Q+HQ++   FC  S++         C H+      +V+   L D+
Sbjct: 478 LSQRHQIDAKMFCNESSVSNCENEYCECTHVVNIPLGTVVEMVLIDK 524


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 0.85
 Identities = 11/56 (19%), Positives = 23/56 (41%)
 Frame = -2

Query: 326 VELSLDESEHQGGLAYRRLAQQHQLELADFCLWSAIGPLCGSGPVCRHIPPCHCSS 159
           +E+++ E    G + +  +A         F     +GP+C S  +  H+   +  S
Sbjct: 222 LEVAIKEDREAGLIPFYVVATLGTTSSCTFDNLEELGPVCNSNNIWLHVDAAYAGS 277


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 0.85
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 243 CQFKLVLLGQSAVGKSSLVLRFVKGQF 323
           C+  L LL    VGK   + RF++G +
Sbjct: 99  CRSALALLLSPEVGKDHRIKRFLRGVY 125


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 110 TEIIINYTLKQI*SLIVNVKLENLEQKSKMTTNKHG 3
           TEI +N T  +  S+  +VKL +L   S M  +  G
Sbjct: 319 TEIFLNITGDKTNSVFEHVKLGSLYHISFMACSSAG 354


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 209 CGSGPVCRH 183
           CG+G VC H
Sbjct: 372 CGNGYVCEH 380


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 209 CGSGPVCRH 183
           CG+G VC H
Sbjct: 373 CGNGYVCEH 381


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 206 RTEAQWRSTD 235
           R EAQW S+D
Sbjct: 681 RQEAQWTSSD 690


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,184
Number of Sequences: 336
Number of extensions: 1609
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)