Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0619
(339 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 48 5e-07
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 36 0.001
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 36 0.002
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 35 0.003
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 32 0.028
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 31 0.048
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 31 0.064
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 31 0.064
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 30 0.084
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 30 0.11
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 30 0.11
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 29 0.15
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 29 0.15
SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyce... 29 0.26
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 28 0.34
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 28 0.45
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 27 0.78
SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalyti... 27 1.0
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 26 1.8
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 25 2.4
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 25 3.2
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 25 4.2
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 24 5.5
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 24 5.5
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 7.3
SPAC16A10.02 |||transcription coactivator Sub1 |Schizosaccharomy... 24 7.3
SPBC211.08c |||ribonuclease PH-like|Schizosaccharomyces pombe|ch... 23 9.6
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 23 9.6
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 23 9.6
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 47.6 bits (108), Expect = 5e-07
Identities = 27/41 (65%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 219 NGAPQTKVC-QFKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
N AP+ V KLVLLG SAVGKSSLVLRFVK QF + +E
Sbjct: 4 NTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRE 44
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 36.3 bits (80), Expect = 0.001
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
+FKLV LG+ +VGK+SL+ RF+ QF + +
Sbjct: 11 KFKLVFLGEQSVGKTSLITRFMYDQFDNTYQ 41
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 35.9 bits (79), Expect = 0.002
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFH 326
FK VL+G S VGKS+L++RF + +F+
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFN 36
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 35.1 bits (77), Expect = 0.003
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHES 332
FKL+L+G S VGKS L+LRF + ES
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTES 36
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 31.9 bits (69), Expect = 0.028
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHES 332
KL+L+G S VGKS L+LRF + F S
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPS 37
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 31.1 bits (67), Expect = 0.048
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHE 329
K+VL G S GKS L+ RFVK Q+ +
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDD 36
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 30.7 bits (66), Expect = 0.064
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHE 329
K+ ++G S++GK+SL++ +V+G F E
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDE 37
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 30.7 bits (66), Expect = 0.064
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
K+V+LG A GK+SL+ F KG F + E
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYE 43
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 30.3 bits (65), Expect = 0.084
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 228 PQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQFHE 329
PQ V FKLVL+G GK++ V R + G+F +
Sbjct: 4 PQN-VPTFKLVLVGDGGTGKTTFVKRHLTGEFEK 36
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 29.9 bits (64), Expect = 0.11
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHES 332
++ +LG +VGKSSL +++V+ F ES
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVES 34
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 29.9 bits (64), Expect = 0.11
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 234 TKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
T + ++KLV++G VGKS+L ++ ++ F
Sbjct: 4 TYLREYKLVVVGDGGVGKSALTIQLIQSHF 33
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 29.5 bits (63), Expect = 0.15
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHE 329
KLV++G A GK+ L++ F KG F E
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPE 33
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 29.5 bits (63), Expect = 0.15
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHE 329
KLV++G A GK+ L++ F KG F E
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPE 33
>SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 388
Score = 28.7 bits (61), Expect = 0.26
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 161 SYSDREGYGDKQDRSRTEAQWRSTDKSLPVQAG 259
S R+G GDK+ RS T++ W S KS+ +G
Sbjct: 7 SDDSRDGEGDKRLRSTTKSTWLSFLKSIATFSG 39
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 28.3 bits (60), Expect = 0.34
Identities = 10/24 (41%), Positives = 20/24 (83%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQF 323
K+++LG+S VGK+S++ ++V +F
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKF 33
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 27.9 bits (59), Expect = 0.45
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQF 323
K+V+LG S VGK+ L+ +FV +F
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKF 33
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 27.1 bits (57), Expect = 0.78
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 231 QTKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
Q++ + KLV++G A GK+SL+ F G F
Sbjct: 3 QSQPIRRKLVVVGDGACGKTSLLSVFTLGYF 33
>SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalytic
subunit Cdc6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 26.6 bits (56), Expect = 1.0
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 113 HGDFVKICRPRKSSERSYSDREGYGDKQDRSRTE 214
HG+ + R R S Y D++G K+ S E
Sbjct: 27 HGEITDVKRRRLSERNGYGDKKGSSSKEKTSSFE 60
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 1.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 337 SWDSWNCPLTNRSTREDLPTAD 272
S S N P N T+EDLPT D
Sbjct: 260 SSSSENVPKPNAETQEDLPTID 281
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHE 329
KLV++G GK+ L++ F G F E
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPE 41
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 25.0 bits (52), Expect = 3.2
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 331 DSWNCPLT-NRSTREDLPTADWPNNTSL 251
D+W CPLT N +T + L + P++ SL
Sbjct: 119 DNWKCPLTINTTTFKFLTRKNNPSSMSL 146
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 24.6 bits (51), Expect = 4.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 156 NGATVTGRDMATNRTGAAQRPNGAPQTKVCQFKLVLLGQSAVGKSSL 296
NG + +G N Q N + + K +K++LLG S GKS++
Sbjct: 5 NGLSESGESKKLNSKIEKQIENASKKDKKI-YKVLLLGASDSGKSTI 50
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 24.2 bits (50), Expect = 5.5
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2
Query: 185 HIPPCHCSSVLNFFLGDRSSRSRRDTEIII 96
H+PP S+ N+ LG++S+ S + +I++
Sbjct: 862 HVPPRPSKSLWNWLLGEQST-SAEELDILL 890
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 24.2 bits (50), Expect = 5.5
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 332 GLVELSLDESEHQGGLAYRRLAQQHQLELAD 240
G LSL + EH G LAQQ E+ D
Sbjct: 63 GATILSLLDVEHPAGKVLVELAQQQDKEVGD 93
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 23.8 bits (49), Expect = 7.3
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 46 SSFTFTINDYICLSV*LMIISVSRRLREDLSPKKKFRTEL 165
S +F+ +D+I ++ M+ VSR + L+ KK +++L
Sbjct: 712 SYVSFSDDDFISATLLYMLEDVSRNKSQLLAEKKHLKSQL 751
>SPAC16A10.02 |||transcription coactivator Sub1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 136
Score = 23.8 bits (49), Expect = 7.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 60 KCKTGKSRTEIQNDHEQTW 4
K + K +TE Q+DHE W
Sbjct: 12 KASSKKPKTEKQSDHELHW 30
>SPBC211.08c |||ribonuclease PH-like|Schizosaccharomyces pombe|chr
2|||Manual
Length = 257
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 167 CSSVLNFFLGDRSSRSRRDTEIIINYTL 84
CS FL ++ ++ +DT ++IN+ L
Sbjct: 220 CSPSRLSFLTEKCIKNAKDTRLVINHAL 247
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 23.4 bits (48), Expect = 9.6
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +3
Query: 90 VINDNFGVTATS*RSVAQEKVQNGATVTGRDMATNRTGAAQRPNGAPQTKVCQFKLVLLG 269
V++ +FGV T SVA + ++ + + GA + G K FK + L
Sbjct: 836 VLHQSFGVKLTGATSVASDPLKGSISKNASIILIGMRGAGKTTIGKIIAKQLNFKFLDLD 895
Query: 270 Q 272
+
Sbjct: 896 E 896
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 23.4 bits (48), Expect = 9.6
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = -2
Query: 245 ADFCLWSAIGPLCGSGPVCRHIPPCHCSSVLNFFLGDRSSRS 120
A +C + +CG G CR + ++ FL R +++
Sbjct: 206 AVYCRYYNANGICGKGAACRFVHEPTRKTICPKFLNGRCNKA 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,400,791
Number of Sequences: 5004
Number of extensions: 26064
Number of successful extensions: 97
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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