Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0619
(339 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 87 3e-18
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 41 2e-04
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 38 0.003
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 37 0.005
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.005
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 37 0.005
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 36 0.008
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 36 0.011
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 35 0.015
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 35 0.015
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 34 0.026
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 34 0.034
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.045
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 33 0.045
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.059
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.10
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 32 0.10
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 32 0.10
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.14
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.18
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 31 0.18
SB_31418| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.18
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.32
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 30 0.42
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 30 0.42
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 30 0.42
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 30 0.42
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 30 0.42
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 30 0.55
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.55
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 30 0.55
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 29 0.73
SB_20827| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.73
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 29 0.73
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.96
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.96
SB_52511| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 29 0.96
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 29 1.3
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 29 1.3
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 29 1.3
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 28 1.7
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_52469| Best HMM Match : MSSP (HMM E-Value=0.54) 27 2.9
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 27 2.9
SB_1242| Best HMM Match : DUF590 (HMM E-Value=4.2e-05) 27 2.9
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 27 3.9
SB_24838| Best HMM Match : NCD1 (HMM E-Value=2.3e-32) 27 3.9
SB_52755| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-16) 27 3.9
SB_51310| Best HMM Match : NCD1 (HMM E-Value=2.3e-32) 27 3.9
SB_51220| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_37123| Best HMM Match : Extensin_2 (HMM E-Value=1.5) 27 3.9
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 27 5.1
SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2) 27 5.1
SB_7440| Best HMM Match : fn3 (HMM E-Value=0.35) 27 5.1
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 26 6.8
SB_34085| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.8
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 26 9.0
SB_35480| Best HMM Match : RVT_1 (HMM E-Value=0.0085) 26 9.0
SB_32837| Best HMM Match : RVT_1 (HMM E-Value=8.3e-17) 26 9.0
SB_27763| Best HMM Match : VapD_N (HMM E-Value=10) 26 9.0
SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_31930| Best HMM Match : RVT_1 (HMM E-Value=1.3e-33) 26 9.0
SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_20766| Best HMM Match : VapD_N (HMM E-Value=10) 26 9.0
SB_19059| Best HMM Match : Arm (HMM E-Value=0.044) 26 9.0
SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11) 26 9.0
SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42) 26 9.0
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 87.4 bits (207), Expect = 3e-18
Identities = 43/52 (82%), Positives = 45/52 (86%)
Frame = +3
Query: 183 MATNRTGAAQRPNGAPQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
MA NR G AQRPNGA K+CQFKLVLLG+SAVGKSSLVLRFVKGQFHE QE
Sbjct: 1 MAANR-GGAQRPNGATMGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQE 51
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
QF+++L+G S VGKSSL+ +F +GQF E+ +
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSD 43
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFH 326
FK+VL+G S VGKS+L+ R+ K +FH
Sbjct: 19 FKIVLIGDSGVGKSNLLSRYTKNEFH 44
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 37.5 bits (83), Expect = 0.003
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHES 332
FK+VL G +AVGKSS +LR + +FH +
Sbjct: 443 FKIVLAGDAAVGKSSFILRLCRNRFHSA 470
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
++K+V+LG VGKS+L ++FV GQF E +
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGQFVEKYD 33
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF-HE 329
+ LVLLGQ+ VGKS+L++RF G+F HE
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHE 155
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
++K+V+LG VGKS+L ++FV GQF E +
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGQFVEKYD 33
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHE 329
F++V+LG VGK+SLV RF+ G F E
Sbjct: 108 FRVVVLGSGGVGKTSLVKRFISGTFSE 134
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FKL+L+G S VGKSSL+LRF F
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTF 33
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 35.1 bits (77), Expect = 0.015
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFH 326
FK+VL+G S VGKS+L+ RF + +F+
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFN 37
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 35.1 bits (77), Expect = 0.015
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
+K+VL+G S VGKSSL+ RF + +F
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEF 37
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 34.3 bits (75), Expect = 0.026
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
K+ ++G +VGKSSL ++FV+GQF +S +
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYD 36
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 33.9 bits (74), Expect = 0.034
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQF 323
++ +V+LG + VGK++LV+RFV G+F
Sbjct: 324 KYSMVVLGAAGVGKTALVVRFVTGRF 349
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 33.5 bits (73), Expect = 0.045
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHESQ 335
FK++L+G + VGK+ LV +F KG F +Q
Sbjct: 8 FKIILVGDANVGKTCLVRQFTKGYFPPNQ 36
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 33.5 bits (73), Expect = 0.045
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +3
Query: 231 QTKVCQFKLVLLGQSAVGKSSLVLRFVKGQFHE 329
+T + +F +V G S+VGK+SL+LRF+ F++
Sbjct: 23 ETSLRRFTIVFFGASSVGKTSLILRFLGYAFND 55
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 33.1 bits (72), Expect = 0.059
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK++++G VGK+SL+ RF KG F
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYF 36
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 32.3 bits (70), Expect = 0.10
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRF 308
FKL+L+G S VGKS L+LRF
Sbjct: 9 FKLLLIGDSGVGKSCLLLRF 28
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQF 323
Q+KLV++G VGKS+L ++F++ F
Sbjct: 11 QYKLVVVGGGGVGKSALTIQFIQSHF 36
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 32.3 bits (70), Expect = 0.10
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHE 329
F+L ++G VGKSS+ +R++K +F E
Sbjct: 2599 FRLCVVGSGGVGKSSVTIRYLKNEFTE 2625
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQF 323
K++++G+S VGKSSL+LRF F
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTF 33
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
FK++++G S VGK+ L R G+F E E
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTE 76
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 219 NGAPQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
+ A Q FKL+++G SAVGK+S + R+ F
Sbjct: 12 DAADQNFDYMFKLLIIGNSAVGKTSFLFRYADDSF 46
>SB_31418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 31.5 bits (68), Expect = 0.18
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 334 WDSWNCPLTN-RSTREDLPTADWPNNTSLNWQTFVCGAPLGLCAAPVLFVA 185
W S+ C L R+ ED P AD S Q+F C P+G C V+ VA
Sbjct: 36 WSSFTCVLEEVRNPTED-PVADNQELNSFVPQSFTCADPVGFCWWIVVKVA 85
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 251 ELADFCLWSAI-GPLCGSGPVCRHIPPCHCSSVLNFFLGDR 132
E+ DFC +++ GP C +G VC + P + + F G R
Sbjct: 4434 EIRDFCALASVNGPACFNGGVCTNTPTSYTCTCARGFHGRR 4474
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 30.3 bits (65), Expect = 0.42
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VLLG++ VGK+SL R + F
Sbjct: 12 FKVVLLGEAGVGKTSLFYRLKENHF 36
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 30.3 bits (65), Expect = 0.42
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 213 RPNGAPQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
RPNG Q ++ ++L+G S GK++L+ +V+ QF+E E
Sbjct: 226 RPNG--QIRI---PVILVGDSECGKTALLNAYVRNQFNEKYE 262
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 30.3 bits (65), Expect = 0.42
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 337 SWDSWNCPLTNRSTREDLPTADWPNNTSL 251
S+ S NCP+TN D PT P+ T+L
Sbjct: 7 SYFSTNCPVTNCKVNADFPTPPDPSTTTL 35
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 30.3 bits (65), Expect = 0.42
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 228 PQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
P V ++V+LGQ VGKS+L +R + +F
Sbjct: 10 PNDNVRSLRVVVLGQDGVGKSALTVRLLTKRF 41
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 30.3 bits (65), Expect = 0.42
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHES 332
FK+V +G S VGKSS + RF Q+ S
Sbjct: 897 FKVVFIGDSGVGKSSFLHRFCHDQWKPS 924
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFH 326
FK+++LG VGKSSL+ RF +F+
Sbjct: 11 FKVLVLGDCNVGKSSLIRRFHDDEFN 36
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 29.9 bits (64), Expect = 0.55
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
K+V LG VGKSSL RF+ F E +
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQ 193
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 29.9 bits (64), Expect = 0.55
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 251 ELADFCLWSAI-GPLCGSGPVCRHIPPCHCSSVLNFFLGDR 132
E+ DFC +++ GP C +G VC + P + + F G R
Sbjct: 2650 EIRDFCALASVNGPACFNGGVCTNTPTSYTCTCARGFHGLR 2690
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 29.5 bits (63), Expect = 0.73
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFH 326
FKL+L+G S VGK+ ++ RF F+
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFN 35
>SB_20827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 29.5 bits (63), Expect = 0.73
Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +2
Query: 242 LPVQAGV-VGPVCGRQVLPGA 301
+P+ AG VGP GR+VLPGA
Sbjct: 87 MPIPAGTWVGPYAGRRVLPGA 107
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 29.5 bits (63), Expect = 0.73
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQF 323
K+V++G+ VGKS+L +RF+ +F
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRF 886
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 29.1 bits (62), Expect = 0.96
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHE 329
KLV++G A GK+ L++ F K QF E
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPE 5956
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 29.1 bits (62), Expect = 0.96
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKG 317
FK++++G + VGK+S V R+V G
Sbjct: 23 FKVLIVGDATVGKTSFVQRYVHG 45
>SB_52511| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 513
Score = 29.1 bits (62), Expect = 0.96
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFVAISLPVTVAP 158
N TS +W + G P G P LF+ T++P
Sbjct: 337 NGTSSDWSPVISGVPQGTMLGPTLFLLFMTCRTLSP 372
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 219 NGAPQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQFH 326
+ A TKV +K+V G VGK+SL LR +F+
Sbjct: 18 SSANHTKVPLYKVVFAGFRGVGKTSLFLRIRDEKFY 53
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 198 TGAAQRPNGAPQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
T Q +G P FK+ +LG SAVGK+SL+ K F
Sbjct: 174 TSNIQMGSGLPPV---DFKMAILGGSAVGKTSLMRALFKKPF 212
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
++ + G + VGK+S+V RF G+F E E
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYE 38
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQF 323
++V+LG+ VGKS+L +RF+ +F
Sbjct: 18 RVVVLGKDGVGKSALTVRFLTRRF 41
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 78 LFKCVINDNFGVTATS*RSVAQEKVQNGATVTGRDMATNRTGAAQR 215
+FKCV+ ++FG+ + S + E+ + + + D AT+R +R
Sbjct: 4953 IFKCVLLNDFGIASCS-AEILVEEDEESYSESSADEATDRNARIER 4997
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHES 332
K+VLLG+ GK+SLV R++ +F+++
Sbjct: 29 KVVLLGKEYSGKTSLVERYLHHRFNDN 55
>SB_52469| Best HMM Match : MSSP (HMM E-Value=0.54)
Length = 341
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 236 CLWSAIGPLCGSGPVCRHI 180
C ++GPL GPVC+H+
Sbjct: 11 CKHVSMGPLTTGGPVCKHV 29
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 236 CLWSAIGPLCGSGPVCRHI 180
C +GPL GPVC+HI
Sbjct: 289 CKHVGMGPLTTGGPVCKHI 307
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 236 CLWSAIGPLCGSGPVCRHI 180
C +GPL GPVC+HI
Sbjct: 304 CKHIGMGPLTTGGPVCKHI 322
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 236 CLWSAIGPLCGSGPVCRHI 180
C +GPL GPVC+H+
Sbjct: 26 CKHVGMGPLTTGGPVCKHV 44
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 236 CLWSAIGPLCGSGPVCRHI 180
C +GPL GPVC+H+
Sbjct: 71 CKHVGMGPLTTGGPVCKHV 89
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 236 CLWSAIGPLCGSGPVCRHI 180
C +GPL GPVC+H+
Sbjct: 150 CKHVGMGPLTTGGPVCKHV 168
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 236 CLWSAIGPLCGSGPVCRHI 180
C +GPL GPVC+H+
Sbjct: 214 CKHVGMGPLTTGGPVCKHV 232
Score = 27.1 bits (57), Expect = 3.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 236 CLWSAIGPLCGSGPVCRHI 180
C +GPL GPVC+H+
Sbjct: 259 CKHVGMGPLTTGGPVCKHV 277
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
+++ LLG VGK++L++RF+ +F
Sbjct: 6 YRIALLGDEGVGKTALLVRFLCHRF 30
>SB_1242| Best HMM Match : DUF590 (HMM E-Value=4.2e-05)
Length = 195
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 337 SWDSWNCPLTNRSTRE 290
+WD WNC T R T E
Sbjct: 119 AWDDWNCKTTARRTTE 134
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFV 311
FK++++G VGK+SL+ R+V
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYV 692
>SB_24838| Best HMM Match : NCD1 (HMM E-Value=2.3e-32)
Length = 539
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 137 RPRKSSERSYSDREGYGDKQDRSRTEAQWRSTDKSLPVQAGVV 265
+ ++ SER YS++EG D Q+ +++ S D S V G++
Sbjct: 371 KKQRRSERYYSNKEGKDDPQEMD--DSRHESQDSSDGVMEGMI 411
>SB_52755| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-16)
Length = 366
Score = 27.1 bits (57), Expect = 3.9
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 144 EKVQNGATVTGRDMATNRTGAAQRPNGAPQTKVCQFKLVLLGQSAVGKSSLVLRFV-KGQ 320
E +Q + + NRTG+ P+ + F LVLLG S V +SLV+ V K +
Sbjct: 5 EDLQRFSNASSLSKNGNRTGSFSPPSEETLLTIFIF-LVLLGLSIVAMNSLVIVLVHKNR 63
Query: 321 F 323
F
Sbjct: 64 F 64
>SB_51310| Best HMM Match : NCD1 (HMM E-Value=2.3e-32)
Length = 423
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 137 RPRKSSERSYSDREGYGDKQDRSRTEAQWRSTDKSLPVQAGVV 265
+ ++ SER YS++EG D Q+ +++ S D S V G++
Sbjct: 371 KKQRRSERYYSNKEGKDDPQEMD--DSRHESQDSSDGVMEGMI 411
>SB_51220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 27.1 bits (57), Expect = 3.9
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = -2
Query: 338 LLGLVELSLDESEHQGGLAYRRLAQQHQLELADFCLWSAIG------PLCGSGPVCRHIP 177
+L L SL + H G+A ++AQ ++LAD L G P C +G V R P
Sbjct: 1327 VLVLSNYSLGNAAHCKGIAVSQVAQLTLMDLADVMLREVHGCPPPTPPPCRTGTV-RLSP 1385
Query: 176 PCHCSSV 156
+C+ V
Sbjct: 1386 STNCTDV 1392
>SB_37123| Best HMM Match : Extensin_2 (HMM E-Value=1.5)
Length = 318
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 337 SWDSWNCPLTNRSTREDLP-TADWPNNTSLNWQTF 236
+WD+ +CPLT P T W N +S QT+
Sbjct: 205 TWDNLSCPLTQTWDNSSSPLTQTWDNPSSPLTQTW 239
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 192 NRTGAAQRPNGAPQTKV---CQFKLVLLGQSAVGKSSLV 299
N G A PN + V +F L+++G+S +GKS+L+
Sbjct: 3 NYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLI 41
>SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)
Length = 531
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 140 PRKSSERSYSDREGYGDKQDRSRTEAQWRSTDK 238
PR+ R Y +R G G + + R + W D+
Sbjct: 170 PREERPRGYRERVGAGSPEAQRRRDPDWPREDR 202
>SB_7440| Best HMM Match : fn3 (HMM E-Value=0.35)
Length = 602
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLF 191
N NW T G P G +PVLF
Sbjct: 531 NGAKSNWLTVKSGVPQGTVLSPVLF 555
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 140 PRKSSERSYSDREGYGDKQDRSRTEAQWRSTDKSLPVQAG 259
PRK+S RS DR+ Y D + ++ T K+ V G
Sbjct: 905 PRKNSGRSLPDRDDYWLADDEGQGDSPVSKTPKTTLVANG 944
>SB_34085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 26.2 bits (55), Expect = 6.8
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFVAISLPVTVAPF*TFSWATDLHEVAVTPKLSLITH 86
N T + W T G G C F ++L V+P + T ++ + TP++SLITH
Sbjct: 12 NTTFVVWNT--TGKDFGQC-----FENLAL---VSPLNSLLLCTSIYFIIRTPRVSLITH 61
Query: 85 L 83
L
Sbjct: 62 L 62
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Frame = +2
Query: 170 DREGYGDKQDRSRTEAQW------RSTDK-SLPVQAGVVGP 271
D +G G+K+D + E QW +STD+ P+ G P
Sbjct: 2666 DSQGKGEKEDANDVEVQWNDGSGQKSTDRQEKPIAGGKTKP 2706
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQF 323
+FK +++G S VGKS LV + F
Sbjct: 350 EFKTLIIGNSGVGKSCLVNKLKNPHF 375
>SB_35480| Best HMM Match : RVT_1 (HMM E-Value=0.0085)
Length = 243
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFV 188
N +W T + G P G P+LF+
Sbjct: 80 NGACSSWSTVLSGVPQGTVLGPILFL 105
>SB_32837| Best HMM Match : RVT_1 (HMM E-Value=8.3e-17)
Length = 327
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFV 188
N +W T + G P G P+LF+
Sbjct: 103 NGACSSWSTVLSGVPQGTVLGPILFL 128
>SB_27763| Best HMM Match : VapD_N (HMM E-Value=10)
Length = 243
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFV 188
N +W T + G P G P+LF+
Sbjct: 19 NGACSSWSTVLSGVPQGTVLGPILFL 44
>SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1102
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 262 NTSLNWQTFVCGAPLGL 212
N SLN T+ CG PLG+
Sbjct: 824 NDSLNLLTYSCGQPLGM 840
>SB_16788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1468
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 337 SWDSWNCPLTNRST 296
+WD WNC T R T
Sbjct: 623 AWDDWNCKTTARRT 636
Score = 25.8 bits (54), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 337 SWDSWNCPLTNRST 296
+WD WNC T R T
Sbjct: 988 AWDDWNCKTTARRT 1001
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFV 188
N +W T + G P G P+LF+
Sbjct: 1944 NGACSSWSTVLSGVPQGTVLGPILFL 1969
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFV 188
N +W T + G P G P+LF+
Sbjct: 1674 NGACSSWSTVLSGVPQGTVLGPILFL 1699
>SB_31930| Best HMM Match : RVT_1 (HMM E-Value=1.3e-33)
Length = 405
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFVAISLPV 170
N SL+ Q +CG PLG P+L+ + P+
Sbjct: 270 NGFSLS-QKMLCGVPLGSVLGPMLYSLYTAPL 300
>SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFV 188
N +W T + G P G P+LF+
Sbjct: 512 NGACSSWSTVLSGVPQGTVLGPILFL 537
>SB_20766| Best HMM Match : VapD_N (HMM E-Value=10)
Length = 182
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFV 188
N +W T + G P G P+LF+
Sbjct: 28 NGACSSWSTVLSGVPQGTVLGPILFL 53
>SB_19059| Best HMM Match : Arm (HMM E-Value=0.044)
Length = 603
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 140 PRKSSERSYSDREGYGDKQDRSRTEAQWRSTDKSLPV 250
PR S + DR G GDK+ R + +ST L +
Sbjct: 152 PRSESSKKTMDRNGSGDKRKRRQHLDGDKSTKDELAI 188
>SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11)
Length = 2297
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 114 TATS*RSVAQEKVQNGATVTGRDMATNRTGAAQRP 218
TA + +SV + K ++ VTG +M R GA RP
Sbjct: 1743 TAKANKSVDEPKRRSYEPVTGVEMRQKRPGAEARP 1777
>SB_6352| Best HMM Match : GTP_CDC (HMM E-Value=1.49939e-42)
Length = 275
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQ 320
+F L+++G S +GKS++V KG+
Sbjct: 114 EFNLMVVGASGLGKSTMVNTLFKGK 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,862,677
Number of Sequences: 59808
Number of extensions: 217899
Number of successful extensions: 767
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 485763447
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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