Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0619
(339 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small GT... 45 1e-05
At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putati... 43 5e-05
At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small GTP-... 43 6e-05
At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putati... 38 0.002
At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)... 38 0.002
At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putati... 36 0.005
At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putati... 36 0.007
At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putati... 36 0.007
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 36 0.007
At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putati... 36 0.007
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 36 0.007
At5g47960.1 68418.m05925 Ras-related GTP-binding family protein ... 36 0.009
At3g07410.1 68416.m00883 Ras-related GTP-binding family protein ... 36 0.009
At1g73640.1 68414.m08525 Ras-related GTP-binding family protein ... 36 0.009
At5g65270.1 68418.m08210 Ras-related GTP-binding family protein ... 35 0.012
At3g12160.1 68416.m01516 Ras-related GTP-binding family protein ... 35 0.012
At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putati... 35 0.012
At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putati... 35 0.016
At4g18800.1 68417.m02776 Ras-related GTP-binding family protein ... 35 0.016
At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putati... 35 0.016
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 34 0.021
At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putati... 34 0.021
At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putati... 34 0.021
At1g18200.1 68414.m02264 Ras-related GTP-binding family protein ... 34 0.021
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 34 0.021
At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / sma... 34 0.021
At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small GTP... 34 0.021
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 34 0.028
At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putati... 34 0.028
At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putati... 34 0.028
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 34 0.028
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 34 0.028
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 34 0.028
At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putati... 34 0.028
At4g39890.1 68417.m05651 Ras-related GTP-binding family protein ... 33 0.037
At3g15060.1 68416.m01905 Ras-related GTP-binding family protein ... 33 0.037
At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putati... 33 0.049
At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putati... 33 0.049
At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putati... 33 0.064
At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putati... 32 0.085
At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putati... 32 0.085
At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putati... 31 0.15
At5g03530.1 68418.m00309 Ras-related GTP-binding family protein ... 31 0.15
At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3) ... 31 0.26
At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein... 31 0.26
At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein... 31 0.26
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 31 0.26
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 31 0.26
At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putati... 30 0.45
At3g16100.1 68416.m02034 Ras-related GTP-binding family protein ... 29 0.60
At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putati... 29 0.60
At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 / ... 29 0.60
At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putati... 29 0.79
At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putati... 29 0.79
At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putati... 29 1.0
At1g32690.1 68414.m04031 expressed protein similar to hypothetic... 29 1.0
At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putati... 28 1.4
At5g57110.2 68418.m07131 calcium-transporting ATPase 8, plasma m... 27 2.4
At5g57110.1 68418.m07130 calcium-transporting ATPase 8, plasma m... 27 2.4
At5g14740.2 68418.m01730 carbonic anhydrase 2 / carbonate dehydr... 27 2.4
At5g14740.1 68418.m01729 carbonic anhydrase 2 / carbonate dehydr... 27 2.4
At5g54840.2 68418.m06831 GTP-binding family protein similar to S... 27 3.2
At5g54840.1 68418.m06830 GTP-binding family protein similar to S... 27 3.2
At3g12950.1 68416.m01613 expressed protein 27 4.2
At3g05310.1 68416.m00579 GTP-binding protein-related low similar... 27 4.2
At4g16970.1 68417.m02559 protein kinase family protein contains ... 26 5.6
At5g16590.1 68418.m01942 leucine-rich repeat transmembrane prote... 26 7.4
At2g41520.2 68415.m05131 DNAJ heat shock N-terminal domain-conta... 26 7.4
At2g41520.1 68415.m05130 DNAJ heat shock N-terminal domain-conta... 26 7.4
At5g26020.1 68418.m03096 hypothetical protein 25 9.7
At4g26240.1 68417.m03777 expressed protein 25 9.7
At3g23410.1 68416.m02951 alcohol oxidase-related similar to long... 25 9.7
At2g21420.1 68415.m02549 zinc finger protein-related contains lo... 25 9.7
At2g16365.1 68415.m06032 F-box family protein contains Pfam:PF00... 25 9.7
>At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small
GTPase Ara6 [Arabidopsis thaliana] GI:13160603
Length = 202
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 198 TGAAQRPNGAP-QTKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
+G + N P K + KLVLLG S VGKS +VLRFV+GQF
Sbjct: 16 SGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQF 58
>At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB5A GI:1370178 from
[Lotus japonicus]
Length = 200
Score = 43.2 bits (97), Expect = 5e-05
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = +3
Query: 225 APQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
A K KLVLLG GKSSLVLRFVK QF E QE
Sbjct: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQE 40
>At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small
GTP-binding protein identical to Ras-related protein
RHA1 SP:P31582 from [Arabidopsis thaliana]
Length = 200
Score = 42.7 bits (96), Expect = 6e-05
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
KLVLLG GKSSLVLRFVK QF E QE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQE 40
>At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11J GI:1370160 from
[Lotus japonicus]
Length = 221
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
FK+VL+G SAVGKS+L+ RF + +F+ + +
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARDEFYPNSK 44
>At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)
identical to Ras-related protein ARA-2 SP:P28185 from
[Arabidopsis thaliana]
Length = 216
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFH 326
FKLVL+G S VGKS+L+ RF K +F+
Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTKNEFN 39
>At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putative
similar to GTP binding protein GI:218228 from [Vicia
faba]; identical to cDNA small GTP-binding protein
(Rab11) GI:451859
Length = 216
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFH 326
FK+VL+G S VGKS+L+ RF K +F+
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFN 39
>At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303744 from [Pisum
sativum]
Length = 216
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G S VGKS+L+ RF K +F
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEF 38
>At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303738 from [Pisum
sativum]
Length = 224
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G SAVGKS L+ RF + +F
Sbjct: 18 FKVVLIGDSAVGKSQLLARFARDEF 42
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FKLVL+G S VGKS+L+ RF + +F
Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTRNEF 38
>At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:623586 from [Nicotiana
tabacum] ; contains an ADP-ribosylation factors family
signature for proteins involved in protein trafficking
Length = 208
Score = 35.9 bits (79), Expect = 0.007
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +3
Query: 225 APQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
AP + + ++KLV LG +VGK+S++ RF+ +F + +
Sbjct: 2 APVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQ 39
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 35.9 bits (79), Expect = 0.007
Identities = 13/30 (43%), Positives = 24/30 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
FK+V++G SAVGKS+L+ R+ + +F+ + +
Sbjct: 13 FKIVIIGDSAVGKSNLLTRYARNEFNPNSK 42
>At5g47960.1 68418.m05925 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 223
Score = 35.5 bits (78), Expect = 0.009
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G SAVGKS L+ RF + +F
Sbjct: 16 FKVVLIGDSAVGKSQLLARFSRNEF 40
>At3g07410.1 68416.m00883 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 217
Score = 35.5 bits (78), Expect = 0.009
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G SAVGKS+L+ RF + +F
Sbjct: 13 FKIVLIGDSAVGKSNLLSRFSRDEF 37
>At1g73640.1 68414.m08525 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 ras family Pfam profile:
PF00071 Ras family
Length = 233
Score = 35.5 bits (78), Expect = 0.009
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK VL+G SAVGKS+L+ RF K +F
Sbjct: 14 FKAVLIGDSAVGKSNLLSRFSKDEF 38
>At5g65270.1 68418.m08210 Ras-related GTP-binding family protein
similar to GTP-binding protein RAB11A GI:1370142 from
[Lotus japonicus]; contains Pfam profile: PF00071 Ras
family
Length = 226
Score = 35.1 bits (77), Expect = 0.012
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +3
Query: 222 GAPQTKVCQ-FKLVLLGQSAVGKSSLVLRFVKGQF 323
G P K+ FK+VL+G SAVGKS ++ R+ + +F
Sbjct: 8 GDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEF 42
>At3g12160.1 68416.m01516 Ras-related GTP-binding family protein
similar to ras-related GTP-binding protein RGP1
SP:P25766 from [Oryza sativa];contains Pfam profile:
PF00071 Ras family
Length = 222
Score = 35.1 bits (77), Expect = 0.012
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G SAVGK+ L+ RF + +F
Sbjct: 16 FKVVLIGDSAVGKTQLLARFARNEF 40
>At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:289370 from [Brassica
napus]
Length = 219
Score = 35.1 bits (77), Expect = 0.012
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFH 326
FK+V++G SAVGKS+L+ R+ + +F+
Sbjct: 13 FKIVIIGDSAVGKSNLLSRYARNEFN 38
>At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 34.7 bits (76), Expect = 0.016
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G S VGKS+L+ RF + +F
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEF 38
>At4g18800.1 68417.m02776 Ras-related GTP-binding family protein
similar to ras-related GTP binding protein RIC2
SP:P40393 from [Oryza sativa]; contains Pfam profile:
PF00071 Ras family
Length = 214
Score = 34.7 bits (76), Expect = 0.016
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G S VGKS+L+ RF + +F
Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEF 38
>At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1370146 from [Lotus
japonicus]
Length = 217
Score = 34.7 bits (76), Expect = 0.016
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G S VGKS+L+ RF + +F
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEF 37
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 34.3 bits (75), Expect = 0.021
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G S VGKS+++ RF + +F
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEF 37
>At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 219
Score = 34.3 bits (75), Expect = 0.021
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF-HESQ 335
FK+VL G S VGKS+L+ RF + F H+S+
Sbjct: 14 FKVVLTGDSGVGKSNLLSRFTRNDFSHDSR 43
>At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from (Pisum
sativum)
Length = 218
Score = 34.3 bits (75), Expect = 0.021
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF-HESQ 335
FK+VL G S VGKS+L+ RF + F H+S+
Sbjct: 14 FKVVLTGDSGVGKSNLLSRFTRNDFSHDSR 43
>At1g18200.1 68414.m02264 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 354
Score = 34.3 bits (75), Expect = 0.021
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK VL+G SAVGKS+L+ RF + +F
Sbjct: 14 FKAVLIGDSAVGKSNLLSRFSRDEF 38
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 34.3 bits (75), Expect = 0.021
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G S VGKS+++ RF + +F
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEF 37
>At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / small
GTP-binding protein, putative nearly identical to
SP:P19892 Ras-related protein ARA-1 [Arabidopsis
thaliana] (Gene 76:313-319(1989))
Length = 261
Score = 34.3 bits (75), Expect = 0.021
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+V++G SAVGKS+L+ R+ + +F
Sbjct: 56 FKIVVIGDSAVGKSNLLSRYARNEF 80
>At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small
GTP-binding protein, putative identical to Ras-related
protein ARA-5 SP:P28188 from [Arabidopsis thaliana]
Length = 203
Score = 34.3 bits (75), Expect = 0.021
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHES 332
FKL+L+G S VGKS L+LRF + ES
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFSDDSYVES 36
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHES 332
KL+L+G S VGKS L+LRF G F S
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTS 43
>At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303750 from [Pisum
sativum]
Length = 202
Score = 33.9 bits (74), Expect = 0.028
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHES 332
FKL+L+G S VGKS L+LRF + +S
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDS 36
>At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putative
very strong similarity to RAB1C [Lotus corniculatus var.
japonicus] GI:1370166; contains Pfam profile PF00071:
Ras family
Length = 202
Score = 33.9 bits (74), Expect = 0.028
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHES 332
FKL+L+G S VGKS L+LRF + +S
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDS 36
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHES 332
KL+L+G S VGKS L+LRF G F S
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTS 43
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHES 332
KL+L+G S VGKS L+LRF G F S
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTS 43
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHES 332
KL+L+G S VGKS L+LRF G F S
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTS 43
>At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putative
similar to Rab1-like small GTP-binding protein
GI:4096662 from [Petunia x hybrida]
Length = 205
Score = 33.9 bits (74), Expect = 0.028
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHES 332
FKL+L+G S+VGKS L+LRF + +S
Sbjct: 9 FKLLLIGDSSVGKSCLLLRFADDAYIDS 36
>At4g39890.1 68417.m05651 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 214
Score = 33.5 bits (73), Expect = 0.037
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 225 APQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
A + + +FKLV LG +VGK+S++ RF+ +F
Sbjct: 2 ASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKF 34
>At3g15060.1 68416.m01905 Ras-related GTP-binding family protein
similar to GTP-binding protein GI:303742 from [Pisum
sativum]; contains Pfam profile: PF00071 ras family
Length = 217
Score = 33.5 bits (73), Expect = 0.037
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
+K+VL+G S VGKS+L+ RF + +F
Sbjct: 14 YKVVLIGDSGVGKSNLLSRFTRNEF 38
>At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11C SP:Q40193 from
[Lotus japonicus]
Length = 217
Score = 33.1 bits (72), Expect = 0.049
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+VL+G S VGK++++ RF + +F
Sbjct: 13 FKIVLIGDSGVGKTNILSRFTRNEF 37
>At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putative
similar to GTP-binding protein(RAB1Y) GI:1370173 from
(Lotus japonicus)
Length = 212
Score = 33.1 bits (72), Expect = 0.049
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHE 329
FK++L+G S VGKSSL+L F F +
Sbjct: 14 FKVLLIGDSGVGKSSLLLSFTSNTFDD 40
>At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:2723477 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00071
Ras family
Length = 205
Score = 32.7 bits (71), Expect = 0.064
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHE 329
FK++L+G S VGKSSL+L F+ +
Sbjct: 14 FKILLIGDSGVGKSSLLLSFISSSVED 40
>At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 207
Score = 32.3 bits (70), Expect = 0.085
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 225 APQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
A + + ++KLV LG +VGK+S++ RF+ +F
Sbjct: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKF 34
>At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GB:D12541 GI:303736 from
[Pisum sativum]
Length = 237
Score = 32.3 bits (70), Expect = 0.085
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQF 323
FK+V++G SAVGK+ L+ RF +F
Sbjct: 29 FKVVVIGDSAVGKTQLLSRFTHNEF 53
>At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 206
Score = 31.5 bits (68), Expect = 0.15
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
+KLV LG VGK+S++ F+ G+F S +
Sbjct: 8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQ 37
>At5g03530.1 68418.m00309 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 210
Score = 31.5 bits (68), Expect = 0.15
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHE 329
FK++L+G S VGKSSL++ F+ +
Sbjct: 14 FKILLIGDSGVGKSSLLVSFISSSVED 40
>At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3)
identical to atran3 [Arabidopsis thaliana] GI:2058280
Length = 221
Score = 30.7 bits (66), Expect = 0.26
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
FKLV++G GK++ V R + G+F + E
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYE 43
>At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein
(RAN-2) identical to GTP-binding nuclear protein RAN-2
SP:P41917 from [Arabidopsis thaliana]
Length = 221
Score = 30.7 bits (66), Expect = 0.26
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
FKLV++G GK++ V R + G+F + E
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYE 43
>At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein
(RAN-1) identical to GTP-binding nuclear protein RAN-1
SP:P41916 from [Arabidopsis thaliana]
Length = 221
Score = 30.7 bits (66), Expect = 0.26
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
FKLV++G GK++ V R + G+F + E
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYE 43
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 30.7 bits (66), Expect = 0.26
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHES 332
KL+L+G S VGKS L+LRF F S
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDDTFTTS 43
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 30.7 bits (66), Expect = 0.26
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHES 332
KL+L+G S VGKS L+LRF F S
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDDTFTTS 43
>At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1208537 from [Glycine
max]
Length = 205
Score = 29.9 bits (64), Expect = 0.45
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQF 323
+FK +++G + VGKS L+L+F +F
Sbjct: 6 RFKYIIIGDTGVGKSCLLLKFTDKRF 31
>At3g16100.1 68416.m02034 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQF 323
K+++LG S VGK+SL+ +FV +F
Sbjct: 10 KVIILGDSGVGKTSLMNQFVNRKF 33
>At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putative
similar to RAB7D GI:1370187 from [Lotus japonicus]
(Plant J. 11 (2), 237-250 (1997)); contains Pfam
PF00071: Ras family
Length = 206
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQF 323
K+++LG S VGK+SL+ +FV +F
Sbjct: 10 KVIILGDSGVGKTSLMNQFVNRKF 33
>At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 /
small GTP-binding protein, putative identical to
SP:O04157 Ras-related protein Rab7 (AtRab75)
[Arabidopsis thaliana]
Length = 203
Score = 29.5 bits (63), Expect = 0.60
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFHE 329
K+++LG S VGK+SL+ ++V +F +
Sbjct: 10 KVIILGDSGVGKTSLMNQYVNNKFSQ 35
>At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putative
similar to Ras-related protein RAB7 GI:1370186 from
[Pisum sativum], Plant Mol. Biol. 21 (6), 1195-1199
(1993); contains Pfam profile: PF00071 Ras family
Length = 206
Score = 29.1 bits (62), Expect = 0.79
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 228 PQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
P + K+++LG S VGK+SL+ ++V +F
Sbjct: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKF 33
>At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putative
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 29.1 bits (62), Expect = 0.79
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 228 PQTKVCQFKLVLLGQSAVGKSSLVLRFVKGQF 323
P + K+++LG S VGK+SL+ ++V +F
Sbjct: 2 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKF 33
>At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A GI:1370182 from
[Lotus japonicus]
Length = 204
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 246 QFKLVLLGQSAVGKSSLVLRFVKGQFHE 329
+ K++LLG S VGK+SL+ R+ F +
Sbjct: 5 KLKIILLGDSGVGKTSLLKRYNDKDFKQ 32
>At1g32690.1 68414.m04031 expressed protein similar to hypothetical
protein GB:AAC61817 GI:3668085 from [Arabidopsis
thaliana]
Length = 200
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 239 FCLWSAIGPLCGSGPVCRHIPPCHCSS 159
FCL + LC P C H PC CSS
Sbjct: 27 FCLHERLSSLC---PDCAHDLPCSCSS 50
>At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putative
similar to GTP-binding protein atran3 GI:2058280 from
[Arabidopsis thaliana]
Length = 222
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 249 FKLVLLGQSAVGKSSLVLRFVKGQFHESQE 338
FKL+++G GK++ + R + G+F + E
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTE 43
>At5g57110.2 68418.m07131 calcium-transporting ATPase 8, plasma
membrane-type / Ca(2+)-ATPase isoform 8 (ACA8) identical
to calcium-transporting ATPase 8, plasma membrane-type
SP:Q9LF79 from [Arabidopsis thaliana]
Length = 1074
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFVAISLPVTVAP 158
+ T LNW+ ++ +G+ + P+ V +PV AP
Sbjct: 1016 STTKLNWKQWLICVGIGVISWPLALVGKFIPVPAAP 1051
>At5g57110.1 68418.m07130 calcium-transporting ATPase 8, plasma
membrane-type / Ca(2+)-ATPase isoform 8 (ACA8) identical
to calcium-transporting ATPase 8, plasma membrane-type
SP:Q9LF79 from [Arabidopsis thaliana]
Length = 1074
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 265 NNTSLNWQTFVCGAPLGLCAAPVLFVAISLPVTVAP 158
+ T LNW+ ++ +G+ + P+ V +PV AP
Sbjct: 1016 STTKLNWKQWLICVGIGVISWPLALVGKFIPVPAAP 1051
>At5g14740.2 68418.m01730 carbonic anhydrase 2 / carbonate
dehydratase 2 (CA2) (CA18) nearly identical to SP|P42737
Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase
2) {Arabidopsis thaliana}
Length = 259
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 119 DFVKICRPRKSSERSYSDREGYGDKQDRSRTEA 217
D+VKIC P KS + S+ + D+ R EA
Sbjct: 175 DWVKICLPAKSKVLAESESSAFEDQCGRCEREA 207
>At5g14740.1 68418.m01729 carbonic anhydrase 2 / carbonate
dehydratase 2 (CA2) (CA18) nearly identical to SP|P42737
Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase
2) {Arabidopsis thaliana}
Length = 331
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 119 DFVKICRPRKSSERSYSDREGYGDKQDRSRTEA 217
D+VKIC P KS + S+ + D+ R EA
Sbjct: 247 DWVKICLPAKSKVLAESESSAFEDQCGRCEREA 279
>At5g54840.2 68418.m06831 GTP-binding family protein similar to
SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase
spg1)(Sid3 protein) {Schizosaccharomyces pombe}
Length = 215
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 180 DMATNRTGAAQRPNGAPQTKVCQFKLVLLGQSAVGKSSLVLRFV 311
D T T + +R + + + K+ LLG GK++ V+++V
Sbjct: 79 DTTTEPTVSGRRFGSSSDSDLVSLKISLLGDCQTGKTTFVVKYV 122
>At5g54840.1 68418.m06830 GTP-binding family protein similar to
SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase
spg1)(Sid3 protein) {Schizosaccharomyces pombe}
Length = 288
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 180 DMATNRTGAAQRPNGAPQTKVCQFKLVLLGQSAVGKSSLVLRFV 311
D T T + +R + + + K+ LLG GK++ V+++V
Sbjct: 79 DTTTEPTVSGRRFGSSSDSDLVSLKISLLGDCQTGKTTFVVKYV 122
>At3g12950.1 68416.m01613 expressed protein
Length = 558
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 58 FTINDYICLSV*LMIISVSRRLRED-LSPKKKFRTELQ*QGGIW 186
F I + + +I+ VSR++ + LSP + T L+ GGIW
Sbjct: 93 FRIRRGVLTDIPAIIVFVSRKVHKQWLSPLQCLPTALEGAGGIW 136
>At3g05310.1 68416.m00579 GTP-binding protein-related low similarity
to rac 1 protein [Physcomitrella patens] GI:7243743;
contains Pfam profile PF00036: EF hand (domain)
Length = 648
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 252 KLVLLGQSAVGKSSLVLRFVKGQFH 326
++V++G+ GKSSL++ + FH
Sbjct: 16 RIVVVGEKGSGKSSLIMAAARNTFH 40
>At4g16970.1 68417.m02559 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 868
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 314 LDESEHQGGLAYRRLAQQHQLELADFCLWSAIGPLCGSGPVCRHIPP 174
L+ EH + +R +QL+ +C++ A+ L G V R + P
Sbjct: 453 LEHLEHDRPDSLKREIDVYQLQWYGYCMFKALSSLHKQGVVHRDVKP 499
>At5g16590.1 68418.m01942 leucine-rich repeat transmembrane protein
kinase, putative
Length = 625
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 97 MIISVSRRLREDLSPKKKFRTELQ*QGGI 183
++++V +RLR+ + P+K+FR +LQ G I
Sbjct: 366 LVVAV-KRLRDVVVPEKEFREKLQVLGSI 393
>At2g41520.2 68415.m05131 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1077
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = -2
Query: 338 LLGLVELSLDESEHQGGLAYRRLAQQHQLELADFCLWSAIGPLCGSG 198
L + +L++ +S GG Y ++ ++ + F + + P+C G
Sbjct: 254 LADMEKLNISDSRVHGGSDYEEASKSNKTPVFTFSSFGKVDPICKEG 300
>At2g41520.1 68415.m05130 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1108
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = -2
Query: 338 LLGLVELSLDESEHQGGLAYRRLAQQHQLELADFCLWSAIGPLCGSG 198
L + +L++ +S GG Y ++ ++ + F + + P+C G
Sbjct: 254 LADMEKLNISDSRVHGGSDYEEASKSNKTPVFTFSSFGKVDPICKEG 300
>At5g26020.1 68418.m03096 hypothetical protein
Length = 241
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 KICRPRKSSERSYSDREGYGDKQDRSRTEAQWRS 229
K+C P E S + R G GD+ S+TE + +S
Sbjct: 118 KVCEP----EASKTQRRGKGDEASASKTERRKKS 147
>At4g26240.1 68417.m03777 expressed protein
Length = 198
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 233 LWSAIGPLCGSGPVCRHI 180
+W GPLCG+G +C ++
Sbjct: 158 IWLPFGPLCGAG-ICLYV 174
>At3g23410.1 68416.m02951 alcohol oxidase-related similar to long
chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 746
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 140 PRKSSERSYSDREGYGDKQ-DRSRTEAQW 223
PR SSE Y GYG +Q D+ ++ W
Sbjct: 383 PRNSSESHYCGSCGYGCRQGDKKGSDRTW 411
>At2g21420.1 68415.m02549 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 468
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2
Query: 212 LCGSGPVCRHIPPCHCSSVLNF 147
LCG P C H P C+S L F
Sbjct: 223 LCGISPTCLHFP---CNSELTF 241
>At2g16365.1 68415.m06032 F-box family protein contains Pfam:PF00646
F-box domain
Length = 778
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 334 WDSWNCPLTNRSTREDLPTADWP 266
W++ + T RS R +L ADWP
Sbjct: 449 WNARDLSFTYRSLRWNLTMADWP 471
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,513,663
Number of Sequences: 28952
Number of extensions: 144177
Number of successful extensions: 528
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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