Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0618
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.2  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 343 SEVVFRVSIFFFMVAGDKYFVGWSDH 266
           ++VV +  + FF + GD     W++H
Sbjct: 308 AKVVSKSGVLFFGLVGDSALGCWNEH 333


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 343 SEVVFRVSIFFFMVAGDKYFVGWSDH 266
           ++VV +  + FF + GD     W++H
Sbjct: 308 AKVVSKSGVLFFGLVGDSALGCWNEH 333


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 343 SEVVFRVSIFFFMVAGDKYFVGWSDH 266
           ++VV +  + FF + GD     W++H
Sbjct: 308 AKVVSKSGVLFFGLVGDSALGCWNEH 333


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 299  GHHEEEYAHPKYDFAYSVADGHSG 370
            G+ E   ++P Y+F+    DG  G
Sbjct: 1045 GYRETSSSNPSYNFSSVSGDGEEG 1068


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 299  GHHEEEYAHPKYDFAYSVADGHSG 370
            G+ E   ++P Y+F+    DG  G
Sbjct: 1041 GYRETSSSNPSYNFSSVSGDGEEG 1064


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 318 YSSSWWPATSTL 283
           YS++ WPATS +
Sbjct: 776 YSTTRWPATSVI 787


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,009
Number of Sequences: 438
Number of extensions: 1328
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)