Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0617
(681 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 184 2e-45
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 183 3e-45
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 180 3e-44
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 179 7e-44
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 167 2e-40
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 161 1e-38
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 157 2e-37
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 157 2e-37
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 153 4e-36
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 150 3e-35
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 147 2e-34
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 139 5e-32
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 139 5e-32
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 135 8e-31
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 80 1e-29
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 130 2e-29
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 129 7e-29
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 122 1e-26
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 121 1e-26
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 118 1e-25
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 112 7e-24
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 110 3e-23
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 110 4e-23
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 103 3e-21
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 101 2e-20
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 101 2e-20
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 100 3e-20
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 100 4e-20
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 99 5e-20
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 98 2e-19
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 97 3e-19
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 95 1e-18
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 95 1e-18
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 95 1e-18
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 95 1e-18
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 93 6e-18
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 92 1e-17
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 91 2e-17
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 91 2e-17
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 91 2e-17
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 91 3e-17
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 89 7e-17
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 89 9e-17
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 88 2e-16
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 87 5e-16
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 86 7e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 85 2e-15
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 84 3e-15
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 84 3e-15
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 83 5e-15
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 82 1e-14
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 82 1e-14
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 81 2e-14
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 80 4e-14
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 78 2e-13
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 78 2e-13
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 78 2e-13
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 76 7e-13
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 76 9e-13
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 76 9e-13
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 73 9e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 71 3e-11
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 71 3e-11
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 71 3e-11
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 70 5e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 69 8e-11
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 69 8e-11
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 69 8e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 69 1e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 69 1e-10
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 68 2e-10
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 67 3e-10
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 65 2e-09
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 62 9e-09
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 62 1e-08
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 62 2e-08
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 61 2e-08
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 61 2e-08
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 61 3e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 61 3e-08
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 61 3e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 59 1e-07
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 58 1e-07
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 58 1e-07
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 58 2e-07
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 57 3e-07
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 57 5e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 56 6e-07
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 55 2e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 53 6e-06
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 52 1e-05
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 50 5e-05
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 49 1e-04
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 47 4e-04
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 46 0.001
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 45 0.001
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 44 0.005
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 44 0.005
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 41 0.024
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 41 0.032
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 40 0.042
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 40 0.042
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 40 0.042
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 40 0.042
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 40 0.056
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 39 0.13
UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26; E... 39 0.13
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 36 0.91
UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI pro... 36 1.2
UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvi... 35 2.1
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 33 8.5
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 184 bits (448), Expect = 2e-45
Identities = 95/213 (44%), Positives = 119/213 (55%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
+G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL
Sbjct: 279 IGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLT 338
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+L+NSS+D+ LHDTYY VAHFHYVLS +P+F GL +N Y LKI F
Sbjct: 339 GVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKIHF 398
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 542
+ FIGVN+ FFPQHFLGL+G+PRRYSDYPD
Sbjct: 399 YLTFIGVNLIFFPQHFLGLSGMPRRYSDYPDMYLNWNLFSSFGSLISLIGVFLFIFIIWE 458
Query: 543 XXXNQRINLFSLNLPSSIE*YQNLPPAEHSYNE 641
QR +F + SSIE + PP +HSY+E
Sbjct: 459 SLIMQRFVIFVKFINSSIEWFHLYPPLDHSYDE 491
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 183 bits (446), Expect = 3e-45
Identities = 88/151 (58%), Positives = 105/151 (69%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L
Sbjct: 295 VGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLT 354
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LNS KI F
Sbjct: 355 GIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHF 414
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 415 GVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 180 bits (438), Expect = 3e-44
Identities = 87/151 (57%), Positives = 104/151 (68%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L
Sbjct: 295 VGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLT 354
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LANSSIDI LHDTYYVVAHFHYVLS + +PLFTG +L+ KI F
Sbjct: 355 GIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTWTKIHF 414
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 415 GVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 179 bits (435), Expect = 7e-44
Identities = 83/151 (54%), Positives = 106/151 (70%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L
Sbjct: 295 VGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLT 354
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LANSS+DI LHDTYYVVAHFHYVLS + +PLF+G +L+ KI F
Sbjct: 355 GIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHF 414
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+FIGVN+TFFPQHFLGL+G+PRRYSDYPD
Sbjct: 415 TIMFIGVNLTFFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 167 bits (406), Expect = 2e-40
Identities = 83/151 (54%), Positives = 99/151 (65%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LN+ K F
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHF 415
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 416 GVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 161 bits (392), Expect = 1e-38
Identities = 79/151 (52%), Positives = 96/151 (63%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L
Sbjct: 295 VGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLS 354
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LAN+S+DI HDTYYVVAHFHYVLS P GL N K F
Sbjct: 355 GVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAHF 414
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+ +F GVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 415 WVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 157 bits (381), Expect = 2e-37
Identities = 78/132 (59%), Positives = 91/132 (68%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L
Sbjct: 208 VGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLT 267
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LANSSIDI LHDTYYVVAHFHYVLS +PLFTG++LN++ LKIQF
Sbjct: 268 GVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFLKIQF 327
Query: 363 FTIFIGVNITFF 398
+FIGVN+TFF
Sbjct: 328 IIMFIGVNLTFF 339
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 157 bits (381), Expect = 2e-37
Identities = 77/151 (50%), Positives = 97/151 (64%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L
Sbjct: 321 VGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLS 380
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LAN+S +I HDTYYVVAHFHYVLS P GLS ++ KI F
Sbjct: 381 GVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKASKIHF 440
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+ +FIGVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 441 WILFIGVNLTFFPQHFLGLQGMPRRISDYPD 471
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 153 bits (371), Expect = 4e-36
Identities = 79/153 (51%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RXXXXXXXXXXX 176
VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + +
Sbjct: 260 VGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGG 319
Query: 177 XXXXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 356
+L+NSS+DI LHDTYYVVAHFHYVLS + TG + I
Sbjct: 320 LTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKITGYAYKDIYGLI 379
Query: 357 QFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
F+ +F+GVNITFFPQHFLGLAG+PRRY+DYPD
Sbjct: 380 HFWLMFLGVNITFFPQHFLGLAGLPRRYADYPD 412
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 150 bits (364), Expect = 3e-35
Identities = 77/151 (50%), Positives = 94/151 (62%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L
Sbjct: 302 VGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLT 361
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LANS +DI+LHDTYYVVAHFHYVLS + TGL + +I F
Sbjct: 362 GIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETLGQIHF 421
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
++ FIGVN+TF P HFLGLAG+PRR DYPD
Sbjct: 422 WSTFIGVNLTFMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 147 bits (356), Expect = 2e-34
Identities = 75/151 (49%), Positives = 91/151 (60%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L
Sbjct: 297 VGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLT 356
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LANS +DI LHDTYYVVAHFHYVLS G + + +I F
Sbjct: 357 GIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHF 416
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+ F GVN+TFFP HFLGL+G+PRR DYPD
Sbjct: 417 WITFFGVNLTFFPMHFLGLSGMPRRIPDYPD 447
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 139 bits (337), Expect = 5e-32
Identities = 65/150 (43%), Positives = 90/150 (60%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++
Sbjct: 338 GMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTG 397
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
+LAN +D LHDTYYVVAHFHYVLS +P +G N ++ ++ F+
Sbjct: 398 VVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNEFLGQLHFW 457
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
F GVN+ FFP HFLGL+G+PRRY DYP+
Sbjct: 458 VFFAGVNLLFFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 139 bits (337), Expect = 5e-32
Identities = 70/153 (45%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RXXXXXXXXXXX 176
G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + +P+
Sbjct: 299 GLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGG 358
Query: 177 XXXXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 356
ILAN+++ LHD+YYVVAHFHYVLS +P +TG+ ++
Sbjct: 359 LTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPRKDLVLT 418
Query: 357 QFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
F FIGVN TFFP H++GL G+PRRY DYPD
Sbjct: 419 HFMLTFIGVNFTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 135 bits (327), Expect = 8e-31
Identities = 66/122 (54%), Positives = 78/122 (63%)
Frame = +3
Query: 90 LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSIDITLHDTYYVVAHFHYVLSX 269
LAT+HG I ++P +L +LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSM 384
Query: 270 XXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 449
+ +PLFTG +LNS K F +F GVN+TFFPQHFLGLAG+PRRYSDY
Sbjct: 385 GAVFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDY 444
Query: 450 PD 455
PD
Sbjct: 445 PD 446
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 79.8 bits (188), Expect(2) = 1e-29
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = +3
Query: 225 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQ 404
+T + HFHYVLS P G + + + K+QF+ +FIGVN TFFPQ
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQ 535
Query: 405 HFLGLAGIPRRYSDYPD 455
HFLGL G+PRR SDYPD
Sbjct: 536 HFLGLQGMPRRISDYPD 552
Score = 73.3 bits (172), Expect(2) = 1e-29
Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 14/95 (14%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI--------------L* 140
VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P + L
Sbjct: 354 VGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGGLL 413
Query: 141 RXXXXXXXXXXXXXXXILANSSIDITLHDTYYVVA 245
+LAN+S+DI HDTYYVVA
Sbjct: 414 NHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 130 bits (315), Expect = 2e-29
Identities = 68/151 (45%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RXXXXXXXXXXXXX 182
GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P
Sbjct: 299 GIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGIT 357
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
IL+N+ ID ++HDT+YVV HFHYVLS + TGLS + + + F
Sbjct: 358 GIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLSYSESLGQAHF 417
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+ FIGVN TFFP HFLG G+PRR DYPD
Sbjct: 418 WMTFIGVNFTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 129 bits (311), Expect = 7e-29
Identities = 64/150 (42%), Positives = 83/150 (55%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P
Sbjct: 306 GLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSG 365
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
IL+ +S+DI LHDTYYVVAHFHY LS P G+S +S ++ F
Sbjct: 366 IILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDSVMMMAVFV 425
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
F+G N+TFFP HF GL G+PR+ DYPD
Sbjct: 426 CFFVGTNMTFFPMHFAGLQGMPRKILDYPD 455
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 122 bits (293), Expect = 1e-26
Identities = 61/125 (48%), Positives = 80/125 (64%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L
Sbjct: 60 VGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLT 119
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
ILANSS+DI LHDTYYVVAHFHYVLS + +PLF+G +L++ KI F
Sbjct: 120 GIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWTKIHF 179
Query: 363 FTIFI 377
+F+
Sbjct: 180 GVMFM 184
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 121 bits (292), Expect = 1e-26
Identities = 62/151 (41%), Positives = 83/151 (54%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++
Sbjct: 400 VGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTT 459
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
IL+ + +D HDTYYVVAHFHYV+S +G + ++ F
Sbjct: 460 GIILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPEWAGQVHF 519
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+ FIG NITFFPQHFLG G+PRRY DYPD
Sbjct: 520 WVFFIGTNITFFPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 118 bits (284), Expect = 1e-25
Identities = 62/138 (44%), Positives = 76/138 (55%)
Frame = +3
Query: 9 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXX 188
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 189 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFT 368
+LANSS+DI LHDTYYVVAHFHYVLS P + ++K F
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINKPLMIKNSIFN 120
Query: 369 IFIGVNITFFPQHFLGLA 422
FP FL ++
Sbjct: 121 NIFSCKFNIFPPTFLSIS 138
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = +2
Query: 281 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 460
C Y IY L+ FI K L KNSIF NI+ K+NIF TF S + ST+ LS LI
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWLI 151
Query: 461 YFMK 472
+K
Sbjct: 152 LLLK 155
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 112 bits (270), Expect = 7e-24
Identities = 61/153 (39%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RXXXXXXXXXXXX 179
G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L
Sbjct: 5 GLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTFGGT 63
Query: 180 XXXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSYILKI 356
IL N +ID+ LHDTYYV+AHFH+VLS F G +L + I+ +
Sbjct: 64 TGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENTIIVL 123
Query: 357 QFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
F+GV +TF P HFLG +PRR DYPD
Sbjct: 124 WSILFFVGVVLTFLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 110 bits (265), Expect = 3e-23
Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RXXXXXXXXXXXXX 182
G+++DTRAYFTS TI+I++PTG K+F + T + + + L
Sbjct: 301 GLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTT 360
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSYILKIQ 359
IL N++ID+ LHDTYYV+AHFH+VLS F G +L + I+ +
Sbjct: 361 GVILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLRENSIVILW 420
Query: 360 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
F+GV +TF P HFLG +PRR DYPD
Sbjct: 421 SMLFFVGVILTFLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 110 bits (264), Expect = 4e-23
Identities = 53/112 (47%), Positives = 71/112 (63%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + +
Sbjct: 272 VGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGLT 331
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN 338
+LANSSID+ LHDTYYVVAHFHYVLS + +PLF+G +L+
Sbjct: 332 GIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFSGYNLH 383
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 103 bits (248), Expect = 3e-21
Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RXXXXXXXXXXXX 179
VG D T +F+S T+II VPTGIK+F L ++ + +P +
Sbjct: 385 VGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGV 444
Query: 180 XXXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQ 359
L+ S++DI HDT++VVAHFHYVLS +P G SLN Y+L+
Sbjct: 445 TGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLNKYLLQGH 504
Query: 360 FFTIFIGVNITFFPQHFLGLAGIPRRYSDY 449
+ +G N+ FFP H+LG+ G+PRR S Y
Sbjct: 505 WLLSMVGFNLCFFPMHYLGIHGLPRRVSCY 534
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 101 bits (242), Expect = 2e-20
Identities = 56/151 (37%), Positives = 77/151 (50%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++
Sbjct: 313 VGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLT 372
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+ A ID L DTY+VVAHFHYVL +P TG LN I +QF
Sbjct: 373 GIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNERIGILQF 432
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+ +G N+TF QHFLGL G+PRR Y D
Sbjct: 433 WLWVLGFNMTFMVQHFLGLMGMPRRVYTYAD 463
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 101 bits (241), Expect = 2e-20
Identities = 52/151 (34%), Positives = 79/151 (52%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTR YF+SAT++IA+PT IK+F + + + +
Sbjct: 52 VGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVT 110
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LANS +D+ +HD+YYVVAHFHYVLS + + L +G +++L++Q
Sbjct: 111 GLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWLLRVQV 170
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+ G F+ H G G+PRR D PD
Sbjct: 171 VLLVWGTTCIFWGMHLSGTLGLPRRVPDAPD 201
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 100 bits (240), Expect = 3e-20
Identities = 53/142 (37%), Positives = 75/142 (52%)
Frame = +3
Query: 24 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANS 203
R +F + T++IAVPTGIKIF T+ G +I N +L ++A+
Sbjct: 312 RMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASV 371
Query: 204 SIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGV 383
DI +HDTY+VV HFHYVL + +P TG +N + ++ F FIG+
Sbjct: 372 PFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNEPLGRLHFILTFIGM 431
Query: 384 NITFFPQHFLGLAGIPRRYSDY 449
N+TF P H LGL G+ RR + Y
Sbjct: 432 NLTFMPMHELGLMGMNRRIALY 453
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 100 bits (239), Expect = 4e-20
Identities = 56/144 (38%), Positives = 73/144 (50%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
G+ A F AT+ IA+PTGIKIF L TI G + Y +L
Sbjct: 304 GLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTG 363
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
+LA ++ D HDTY+VVAHFHYV+ +P G L+ + KI F
Sbjct: 364 VMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKISFV 423
Query: 366 TIFIGVNITFFPQHFLGLAGIPRR 437
FIG ++TFF QHF+GL G+PRR
Sbjct: 424 LFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 99 bits (238), Expect = 5e-20
Identities = 51/142 (35%), Positives = 77/142 (54%)
Frame = +3
Query: 30 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSI 209
+FT+++ +IA+P+G++IF +AT+ G++ +L ++A+
Sbjct: 325 FFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASVPF 384
Query: 210 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 389
D+ HDTY+VVAHFHYVL YP FTG ++ + K+ F+ F G N+
Sbjct: 385 DMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFTGRMMSERLGKVAFWVTFAGFNL 444
Query: 390 TFFPQHFLGLAGIPRRYSDYPD 455
TFFP H LGL G+PRR Y D
Sbjct: 445 TFFPMHKLGLEGMPRRVYTYLD 466
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 98.3 bits (234), Expect = 2e-19
Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+D+RAYF +I+I +PT +K+F + + T + +
Sbjct: 297 VGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVT 356
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
L+N IDI LHDTY+VV HFHYVLS + L L + Y+ + +
Sbjct: 357 GLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFI--HFLAKWLPIELYLFWMFY 414
Query: 363 F--TIFIGVNITFFPQHFLGLAGIPRRYSDYP 452
F T+FIG N+ FFP H LG+ PRR SDYP
Sbjct: 415 FISTLFIGSNMLFFPMHSLGMYAFPRRISDYP 446
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 97.5 bits (232), Expect = 3e-19
Identities = 50/138 (36%), Positives = 70/138 (50%)
Frame = +3
Query: 33 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSID 212
F +T++IA+P+ IK F ATI G ++ +N L +A +D
Sbjct: 356 FMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPVD 415
Query: 213 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 392
+ HDTY++VAHFHY+L +P G +N + K F FIG N T
Sbjct: 416 VYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMNEKLGKTHFVLTFIGANGT 475
Query: 393 FFPQHFLGLAGIPRRYSD 446
FFP HFLG+ G+PRRY+D
Sbjct: 476 FFPMHFLGMQGMPRRYAD 493
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 95.5 bits (227), Expect = 1e-18
Identities = 52/149 (34%), Positives = 76/149 (51%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
+G ++F+ T+ I++PTG+KIF L T++ +I++ +L
Sbjct: 334 MGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVT 393
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LA ++ D H+TY++V+HFHYVL YP G LN I K F
Sbjct: 394 GVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNERIGKWFF 453
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDY 449
+ IG NI FFPQ+FLGL G+PRR Y
Sbjct: 454 WIFMIGFNICFFPQYFLGLQGMPRRIYTY 482
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/142 (33%), Positives = 70/142 (49%)
Frame = +3
Query: 30 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSI 209
+F + T+IIA+PT IK++ + T+ I+ +L L N +
Sbjct: 343 FFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVV 402
Query: 210 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 389
D+ L DT +VVAHFH V+ + YP TG LN + K F+ F+G +
Sbjct: 403 DVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVTGRMLNDVLGKFHFWVTFLGAYL 462
Query: 390 TFFPQHFLGLAGIPRRYSDYPD 455
FFP H+LGL G+PRRY + D
Sbjct: 463 IFFPMHYLGLLGVPRRYFELGD 484
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 95.1 bits (226), Expect = 1e-18
Identities = 54/149 (36%), Positives = 75/149 (50%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++L
Sbjct: 312 VGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGIS 371
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
LA+ I++ D+YYVVAH HYVL +P TG L+ + K QF
Sbjct: 372 GVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLDERLGKWQF 431
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDY 449
+ + I N+TFFP H G AG+PRR Y
Sbjct: 432 WLMLISFNLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 95.1 bits (226), Expect = 1e-18
Identities = 47/136 (34%), Positives = 70/136 (51%)
Frame = +3
Query: 33 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSID 212
F T+IIAVP+ +K F + T+ I + P ++ IL N+++D
Sbjct: 366 FMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNAMD 425
Query: 213 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 392
I LHDTYYVVAHFH V+ + +P G ++ + I F+ F+G +
Sbjct: 426 IQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDEKLGYIHFWFTFVGAYLV 485
Query: 393 FFPQHFLGLAGIPRRY 440
FFP H++G+AG PRRY
Sbjct: 486 FFPMHYIGIAGFPRRY 501
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 93.1 bits (221), Expect = 6e-18
Identities = 52/149 (34%), Positives = 74/149 (49%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
G+ TR F+ T++IAVPTGIKIF + T++ I++ +L
Sbjct: 251 GVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTG 310
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
L +ID+ + D+ +VV HFHYVL + +PL TG + K+ F+
Sbjct: 311 LPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATGKYYPENLGKLSFW 370
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDYP 452
IF G NI +F Q G+ G PRRY DYP
Sbjct: 371 LIFAGANIFYFLQMVAGMLGNPRRYPDYP 399
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 91.9 bits (218), Expect = 1e-17
Identities = 49/148 (33%), Positives = 70/148 (47%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
G+D RA F + ++ IAVP+ +K F + T+ I +L
Sbjct: 380 GLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTG 439
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
LA+ +D+ LH TYYVV HFHY++ +PL+TG + K+ F+
Sbjct: 440 VFLASIPVDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQRTLGKMHFW 499
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDY 449
IG NITFF LG G+PRRY+ Y
Sbjct: 500 LSMIGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 91.5 bits (217), Expect = 2e-17
Identities = 47/138 (34%), Positives = 69/138 (50%)
Frame = +3
Query: 33 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSID 212
F AT++IA+P+ +K F L T++G ++ + +L +A + +D
Sbjct: 353 FMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVD 412
Query: 213 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 392
I +HDTY++VAHFHYVL +P G +N KI F FI +N T
Sbjct: 413 IVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETAGKIHFALTFIFLNGT 472
Query: 393 FFPQHFLGLAGIPRRYSD 446
FF H LG+ G PRR +D
Sbjct: 473 FFTMHILGVGGFPRRLAD 490
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 91.5 bits (217), Expect = 2e-17
Identities = 58/152 (38%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RXXXXXXXXXXXXX 182
G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++ N +
Sbjct: 279 GLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTS 338
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
IL+N+S+D LHDTYYVVAHFH V++ Y L + LSL + +
Sbjct: 339 GIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGILVGL---YYLSSYLSLPFSLPLSGY 395
Query: 363 FTIFIGVNITFFP-QHFLGLAGIPRRYSDYPD 455
++F+ + + F QHF G + +PRRY + D
Sbjct: 396 ASLFVFSSFSVFALQHFQGYSAMPRRYFMHSD 427
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 91.1 bits (216), Expect = 2e-17
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RXXXXXXXXXXX 176
GI + +F++A++ +A+P+GI++F +ATI ++ + P++
Sbjct: 321 GIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGG 379
Query: 177 XXXXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 356
++A ID +HDTY+VVAHFHYVL P F+ L+ + +
Sbjct: 380 VTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFSRNMLSERLGRW 439
Query: 357 QFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
F+ +FIG N+TFFP H GL G+PRR YPD
Sbjct: 440 VFWLMFIGFNVTFFPMHMAGLLGMPRRVRTYPD 472
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 90.6 bits (215), Expect = 3e-17
Identities = 50/141 (35%), Positives = 72/141 (51%)
Frame = +3
Query: 27 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSS 206
++FT++++ IAVP G++IF LATI + + L ++A+
Sbjct: 318 SFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASVP 377
Query: 207 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 386
D +HDTY+VVAHFHYVL +P TG ++ + + F IF G N
Sbjct: 378 FDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMSETLGRWSFGLIFSGFN 437
Query: 387 ITFFPQHFLGLAGIPRRYSDY 449
+TFFP H LGL G+PRR Y
Sbjct: 438 LTFFPMHILGLQGMPRRIYTY 458
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 89.4 bits (212), Expect = 7e-17
Identities = 56/160 (35%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT-QINYNPNIL*RXXXXXXXXXXXX 179
VG++ DTRAYF++ TI+IA+PTG KIF L T + ++
Sbjct: 8 VGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGGT 67
Query: 180 XXXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN------- 338
++ N+ +DI LHDTYY+VAHFH+VLS G +LN
Sbjct: 68 TGVVMGNAGMDIALHDTYYIVAHFHFVLSLGAILATICGFVFYSKDMFGDTLNLFHVNTG 127
Query: 339 -SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
S L I F + + F P H LG +PRR DYPD
Sbjct: 128 SSPYLNIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPD 167
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 89.0 bits (211), Expect = 9e-17
Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RXXXXXXXXXXXX 179
VG+DID+R+YF+ AT II++PT +K+F + T G N +
Sbjct: 304 VGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFGGF 363
Query: 180 XXXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQ 359
+L++ S+DI LHDTY+VV HFH VLS P+ S+
Sbjct: 364 TGLLLSSGSLDIMLHDTYFVVGHFHTVLSLAATFGLLIAHYFFLPIIFSYSIFESFSFYH 423
Query: 360 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
F + +G + F+P H GL+G+ RR +Y D
Sbjct: 424 TFLLLVGALLVFYPMHLAGLSGMARRVPEYAD 455
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 87.8 bits (208), Expect = 2e-16
Identities = 47/142 (33%), Positives = 69/142 (48%)
Frame = +3
Query: 24 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANS 203
R F T++IA+PTG+K+F L T+ + N +L +LA
Sbjct: 327 RHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATV 386
Query: 204 SIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGV 383
IDI + +TY+VVAHFHYV+ + +P FTG + K+ F FIG
Sbjct: 387 PIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYEGLGKVHFVLTFIGA 446
Query: 384 NITFFPQHFLGLAGIPRRYSDY 449
+ + P H+ GL G+PRR + Y
Sbjct: 447 TLNWLPLHWAGLLGMPRRVASY 468
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 86.6 bits (205), Expect = 5e-16
Identities = 52/149 (34%), Positives = 71/149 (47%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L
Sbjct: 314 VGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLS 373
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+ A + D HDTY+VVAHFHYVL + +P G L+ + + F
Sbjct: 374 GFMHAAAPSDAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDERLGRWSF 433
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDY 449
IF G + FP H LGL G+PRR Y
Sbjct: 434 ALIFTGFHTFAFPFHILGLLGMPRRIYTY 462
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 86.2 bits (204), Expect = 7e-16
Identities = 44/142 (30%), Positives = 72/142 (50%)
Frame = +3
Query: 30 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSI 209
+F+ T +I+VPTG+K F + T+ I + ++ +LA+ +
Sbjct: 326 FFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLASPPL 385
Query: 210 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 389
D L D+Y+++AHFHY L +P TG ++ + KI F+ F+G +
Sbjct: 386 DFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDERLGKIHFWLTFVGFHG 445
Query: 390 TFFPQHFLGLAGIPRRYSDYPD 455
TF QH++G G+PRRY+DY D
Sbjct: 446 TFLIQHWVGNMGMPRRYADYLD 467
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 84.6 bits (200), Expect = 2e-15
Identities = 51/144 (35%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Frame = +3
Query: 30 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RXXXXXXXXXXXXXXXILANSS 206
YFT+ TI+IA+PTG KIF + T+ + I +L +L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 207 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y-PLFTGLSLNSYILKIQFFTIFIGV 383
ID+ LHDT YVV HFH+VLS L G+ L++ + + I V
Sbjct: 369 IDLALHDTVYVVGHFHFVLSIGAIISMICFIIYIQRMLLFGIILSNRLSSLIAPIFMISV 428
Query: 384 NITFFPQHFLGLAGIPRRYSDYPD 455
+TF P HF G + +PRR DYPD
Sbjct: 429 LLTFLPMHFTGFSPLPRRIPDYPD 452
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 84.2 bits (199), Expect = 3e-15
Identities = 45/142 (31%), Positives = 69/142 (48%)
Frame = +3
Query: 27 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSS 206
A+F +A+++I++P+ + +F +ATI + + L + A
Sbjct: 338 AFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVP 397
Query: 207 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 386
+D L DTY+VVAH HYVL +P FTG +N K+ F+ + +G N
Sbjct: 398 LDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTGRMMNERFGKLTFWVVLVGFN 457
Query: 387 ITFFPQHFLGLAGIPRRYSDYP 452
+ FFP H GL G+PRR YP
Sbjct: 458 LGFFPMHISGLLGMPRRIYTYP 479
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 84.2 bits (199), Expect = 3e-15
Identities = 76/192 (39%), Positives = 82/192 (42%)
Frame = +1
Query: 76 KFLDD*LQYMELKLIITLIFYED*VLYFYSQEED*QV*F*PXXXXXXXXXXXXXXXXXXX 255
KFL D +MELKLI+ L FYED L FY Q ED F
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSEDSLELFSLIHPLMLLYMMHIMLSHISI 375
Query: 256 XXXXXXXXXXXXXXXXXXXXXXXAFH*ILIY*KFNFLQYLLE*I*HFFHNIF*V*LEYLD 435
+ I Y KFNFL Y E I F NIF LEYLD
Sbjct: 376 MFFPSGQYLLLSADLFIDTLYLLDYLSIHSYSKFNFLLYSSELISLFSLNIFSGSLEYLD 435
Query: 436 DIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*LLFENQ*LTNELTYFL*ISHHQLNDIKIY 615
DI IIQ EI F H F Y LLFENQ EL Y + LND KIY
Sbjct: 436 DILIIQILTSLEISFHHSDLTFHCLPSYSYSLLFENQSFITELLYLPSMYLLLLNDTKIY 495
Query: 616 HQQNIHIMNYQF 651
QQ+IH+MNYQF
Sbjct: 496 LQQSIHMMNYQF 507
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 83.4 bits (197), Expect = 5e-15
Identities = 43/148 (29%), Positives = 69/148 (46%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
GID R+ F + ++ I++P+ +K+F + T+ ++ +L
Sbjct: 349 GIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTG 408
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
LA ID+ LHDTYYVV HFH+++ +P+ TG + F+
Sbjct: 409 VFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQKRLAHAHFW 468
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDY 449
T +G N TF +LG G+PRRY+ Y
Sbjct: 469 TALVGSNATFLAMLWLGYGGMPRRYATY 496
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 81.8 bits (193), Expect = 1e-14
Identities = 46/141 (32%), Positives = 65/141 (46%)
Frame = +3
Query: 33 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSID 212
F+ T+II +P + L +++G+++ N L LA SID
Sbjct: 352 FSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSID 411
Query: 213 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 392
I LH TY+VV HFH V+ +P TG +N + KI F+ FIG
Sbjct: 412 IYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETLGKIHFWGTFIGAYCI 471
Query: 393 FFPQHFLGLAGIPRRYSDYPD 455
F P H+LG+ G RRYS + D
Sbjct: 472 FMPFHYLGMVGNVRRYSSFVD 492
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/149 (28%), Positives = 73/149 (48%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
G+ + +F++A+ + +PTGI++F +AT+ ++ +L
Sbjct: 337 GLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTG 396
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
++A + D +HDTY++VAH HY L YP+ T +L+ + + F+
Sbjct: 397 VMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALSERLGRWSFW 456
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDYP 452
+F G N+TF P H GL G+PRR YP
Sbjct: 457 LLFTGFNVTFLPMHLTGLKGMPRRVFTYP 485
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/135 (31%), Positives = 67/135 (49%)
Frame = +3
Query: 45 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSIDITLH 224
T++I++P G+ + + T++G I++ +L LA S+ + L
Sbjct: 309 TVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLS 368
Query: 225 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQ 404
+TYYVV HFHYV++ +P TG N I K F+ F+GVNI F+
Sbjct: 369 ETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMTGKMYNETIGKWAFWITFVGVNIVFWIM 428
Query: 405 HFLGLAGIPRRYSDY 449
+G+ G+PRRY DY
Sbjct: 429 MDIGVEGMPRRYYDY 443
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 80.2 bits (189), Expect = 4e-14
Identities = 42/139 (30%), Positives = 66/139 (47%)
Frame = +3
Query: 33 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSID 212
F T +IAVPTG+K+F + T+ G ++ + +L+ + +D
Sbjct: 314 FAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLD 373
Query: 213 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 392
HD+Y+VVAHFH VL +P TG + + ++ F+ +G +T
Sbjct: 374 YQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERLGRLHFWLFLVGYLLT 433
Query: 393 FFPQHFLGLAGIPRRYSDY 449
F PQ+ LG G+PRRY Y
Sbjct: 434 FLPQYALGYLGMPRRYYTY 452
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 77.8 bits (183), Expect = 2e-13
Identities = 49/150 (32%), Positives = 67/150 (44%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VGI + F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 312 VGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGIT 371
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
L D + +YYVVAHFH V+ +P TG L+ + F
Sbjct: 372 GVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDEKVGLAHF 431
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYP 452
+ IG +TF PQ+ LGL G+PRRY YP
Sbjct: 432 WLFMIGSWLTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 77.8 bits (183), Expect = 2e-13
Identities = 44/149 (29%), Positives = 73/149 (48%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
G+ I + + F++A+ ++AVPTG++IF +AT+ + +
Sbjct: 337 GLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTG 396
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
++A ++ HD+Y+VVAH HYVL P FTG ++ + K F+
Sbjct: 397 VMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERLGKWVFW 456
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDYP 452
+F G N+ FF H G+ G+PRR + YP
Sbjct: 457 LMFSGFNLAFFMMHLTGMRGMPRRVATYP 485
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/81 (46%), Positives = 51/81 (62%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L
Sbjct: 312 VGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVT 371
Query: 183 XXILANSSIDITLHDTYYVVA 245
++ANSS+DI HDTYYVVA
Sbjct: 372 GVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 76.2 bits (179), Expect = 7e-13
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = +3
Query: 12 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 137
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLL 42
Score = 49.6 bits (113), Expect = 7e-05
Identities = 36/88 (40%), Positives = 44/88 (50%)
Frame = +1
Query: 352 KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*L 531
KFN Y LE I HF HNIF EYLDDIQI + E+ + +L + L
Sbjct: 115 KFNLQLYFLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEMLYQDLDLYYLLLELSISYL 174
Query: 532 LFENQ*LTNELTYFL*ISHHQLNDIKIY 615
LFE + + YFL H LND KI+
Sbjct: 175 LFEKELSQIDQFYFLLNYRHLLNDTKIF 202
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 75.8 bits (178), Expect = 9e-13
Identities = 41/149 (27%), Positives = 64/149 (42%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
G+ + F T+ + + +F +AT+ +I ++ ++
Sbjct: 297 GMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGG 356
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
+ A +D T HDTY+VV HFH + +P TG N + KI F
Sbjct: 357 VLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRMYNEKLGKIHFV 416
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDYP 452
F+G + FF QH LG+ G+PRR DYP
Sbjct: 417 FSFVGAVLLFFTQHILGIYGMPRRVYDYP 445
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 75.8 bits (178), Expect = 9e-13
Identities = 38/78 (48%), Positives = 49/78 (62%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L
Sbjct: 294 VGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLT 353
Query: 183 XXILANSSIDITLHDTYY 236
ILAN+S+D+ LHD Y
Sbjct: 354 GVILANASLDVALHDLKY 371
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 72.5 bits (170), Expect = 9e-12
Identities = 40/141 (28%), Positives = 62/141 (43%)
Frame = +3
Query: 33 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSID 212
F T+I+ V T IK+F + T++ + + L S+D
Sbjct: 330 FGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLD 389
Query: 213 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 392
+ HDTY+VVAHFH+++ +P G + + + I +G N T
Sbjct: 390 VAWHDTYFVVAHFHFIMVGATIMAFLAALHYWFPKMFGRTYHEGWGLVAAALIILGFNAT 449
Query: 393 FFPQHFLGLAGIPRRYSDYPD 455
F PQ LG G+PRRY +YP+
Sbjct: 450 FIPQFLLGNNGMPRRYYEYPE 470
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++
Sbjct: 295 VGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLT 354
Query: 183 XXILANSSIDITLHD 227
+LAN+S+D+ HD
Sbjct: 355 GVVLANASLDVAFHD 369
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 70.5 bits (165), Expect = 3e-11
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
+G + A+F AT+II++PTG+K+F L TI+ ++ + IL
Sbjct: 339 MGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMT 398
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LA D LH++ +++AHFH + +P G LN + K F
Sbjct: 399 GVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVFGFKLNDKLGKASF 458
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRR--YSDYP 452
+ IG F P + LG G+ RR ++D P
Sbjct: 459 WFWQIGFMFAFMPLYVLGFLGMTRRLNHTDNP 490
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 70.5 bits (165), Expect = 3e-11
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RXXXXXXXXXX 173
GI + ++F +A+ +A+P+G+++F +AT + I L
Sbjct: 380 GIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFVLG 439
Query: 174 XXXXXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK 353
++A D HD+Y++VAH HYVL P + +L+ + +
Sbjct: 440 GLTGVMVAVIPFDWQAHDSYFIVAHLHYVLVGGMVFPLFAAFYYWMPYTSRQALSERLGR 499
Query: 354 IQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 449
F +F+G NITFFP HF GLAG+PRR Y
Sbjct: 500 WVFGLMFVGFNITFFPMHFTGLAGMPRRVYTY 531
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 70.1 bits (164), Expect = 5e-11
Identities = 40/141 (28%), Positives = 60/141 (42%)
Frame = +3
Query: 33 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSID 212
F ++ + + T IK+F AT++ I + LA S+D
Sbjct: 323 FGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLD 382
Query: 213 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 392
+ HDTY++VAHFH+++ +P G L + I +G N T
Sbjct: 383 VHWHDTYFIVAHFHFIMVGATVMAFLAALHYWFPKIAGKRLPEGWGLVAAVMIILGFNFT 442
Query: 393 FFPQHFLGLAGIPRRYSDYPD 455
F PQ LG G+PRRY YP+
Sbjct: 443 FIPQFLLGNEGMPRRYFSYPE 463
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 69.3 bits (162), Expect = 8e-11
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 351 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
KI F +F+GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +3
Query: 552 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 659
NQRI LFSLN+PSSIE YQNLPPAEHSYNELPIL N
Sbjct: 451 NQRIILFSLNMPSSIEWYQNLPPAEHSYNELPILSN 486
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 69.3 bits (162), Expect = 8e-11
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
+G +F AT++I++PTG+K+F L TI+ ++ + I+
Sbjct: 338 MGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMT 397
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
+LA D LH++ +V+AHFH V+ +P G +LN K F
Sbjct: 398 GVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNEKWGKAAF 457
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRR--YSDYP 452
+ G + F P + LG G+ RR +SD P
Sbjct: 458 WFWISGFYVAFMPLYALGFMGMTRRLNHSDNP 489
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/147 (26%), Positives = 67/147 (45%)
Frame = +3
Query: 12 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXI 191
D R AT+ +A+P+G+K+F +AT++G +I +L
Sbjct: 307 DFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVF 366
Query: 192 LANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTI 371
++D+ LHDTY+V+ HFHY+++ +P TG + + +I + I
Sbjct: 367 FPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY-FPHLTGRWYDERLARISWALI 425
Query: 372 FIGVNITFFPQHFLGLAGIPRRYSDYP 452
+G T+ G+ G PRRY+ P
Sbjct: 426 TVGGFATYTLMSAAGVLGSPRRYAAAP 452
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 68.5 bits (160), Expect = 1e-10
Identities = 42/148 (28%), Positives = 68/148 (45%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
G +I TR +++ TI+I++P + + + T++ ++ Y +L
Sbjct: 303 GTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFIIGGSTG 362
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
L + +ID TY+VVAHFHY+L +P TG + + + KI F
Sbjct: 363 VYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSERLGKIHFA 422
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDY 449
+GV +TF PQ L +PRRY Y
Sbjct: 423 LAMLGVALTFLPQ--FALMDMPRRYFTY 448
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/150 (26%), Positives = 69/150 (46%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXX 182
VG+D +R +++ TI+I++P IK+ ++ + + L
Sbjct: 455 VGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFT 514
Query: 183 XXILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQF 362
L++ S+++++HDT+YVVAHFH +LS + G+ + +
Sbjct: 515 GMWLSHVSLNVSMHDTFYVVAHFHIMLSGAAITGIFSGFYYYFNALFGIKFSRMFGYMHL 574
Query: 363 FTIFIGVNITFFPQHFLGLAGIPRRYSDYP 452
G + F PQ +LG +G+PRR DYP
Sbjct: 575 IYYSGGQWVAFVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/74 (47%), Positives = 38/74 (51%)
Frame = +3
Query: 438 YSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNLP 617
YSDYPD NQR+ LFSLN+PSSIE YQN P
Sbjct: 1 YSDYPDNYMSWNIISSFGSYISLFSMILIIIIIWESMINQRMILFSLNMPSSIEWYQNFP 60
Query: 618 PAEHSYNELPILRN 659
P+EHSYNELPIL N
Sbjct: 61 PSEHSYNELPILSN 74
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +3
Query: 30 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 137
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSIL 132
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 62.5 bits (145), Expect = 9e-09
Identities = 33/62 (53%), Positives = 36/62 (58%)
Frame = +3
Query: 189 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFT 368
ILANSS DI LHDTYYVVAH HYVLS +PLFTGL+L I F
Sbjct: 275 ILANSSXDIILHDTYYVVAHXHYVLSMGAVFAILAGIVQWFPLFTGLTLTMNIKNTIFSY 334
Query: 369 IF 374
I+
Sbjct: 335 IY 336
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2
Query: 350 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 472
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/140 (25%), Positives = 68/140 (48%)
Frame = +3
Query: 30 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSI 209
+F++AT+++ +PTG+K+F T+ ++ + P +L +LA +I
Sbjct: 366 FFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAI 425
Query: 210 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 389
+ T+H++ +VVAHFH ++ +P G L++ + F++ +G +
Sbjct: 426 NYTVHNSVFVVAHFHCMMLLIAYAIFGAIIF-WFPKLFGFHLDAPSARANFWSFSVGTVL 484
Query: 390 TFFPQHFLGLAGIPRRYSDY 449
F LGL G+ RR DY
Sbjct: 485 VFGAMFALGLMGMTRRL-DY 503
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 61.7 bits (143), Expect = 2e-08
Identities = 42/150 (28%), Positives = 64/150 (42%)
Frame = +3
Query: 6 GIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXX 185
GI++ + F + TI I++P + +F + T+ ++ + L
Sbjct: 317 GINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITG 376
Query: 186 XILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 365
L +D TY+VVAHFHYV+ YP TG N + KIQF
Sbjct: 377 VFLGAIVLDYQFRGTYWVVAHFHYVMVAGATALFGGLYYW-YPKITGKMYNETLGKIQFG 435
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
F+G N+ +FP F+ PRR YP+
Sbjct: 436 VYFLGFNLLYFPM-FIAWE-TPRRVFVYPE 463
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 61.3 bits (142), Expect = 2e-08
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Frame = +3
Query: 30 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSI 209
+F+ +T+IIA+PTG+KIF + TI + + IL+ ++
Sbjct: 342 FFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNL 401
Query: 210 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPL-FTGLSLNSYILKIQFFTIF--IG 380
D H++ +++AHFH V+ Y L + LN+ K F +F IG
Sbjct: 402 DFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIYNNCELNN---KFNFNILFWLIG 458
Query: 381 VNITFFPQHFLGLAGIPRRYSDY 449
V +TFFP +FLG G+ RR + Y
Sbjct: 459 VILTFFPFYFLGYCGMIRRINIY 481
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/139 (27%), Positives = 58/139 (41%)
Frame = +3
Query: 33 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSID 212
F + T +++PTG + TI G ++ N +L A+ D
Sbjct: 396 FMTITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNADVPAD 455
Query: 213 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 392
+ LH+TY+V+AHFH +P TG +N + K + F+ N T
Sbjct: 456 LQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGRKINEFWGKFHAWWSFVFFNCT 515
Query: 393 FFPQHFLGLAGIPRRYSDY 449
FFP GL G+ RR + Y
Sbjct: 516 FFPMFIAGLDGMNRRIAIY 534
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 60.9 bits (141), Expect = 3e-08
Identities = 38/141 (26%), Positives = 65/141 (46%)
Frame = +3
Query: 27 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSS 206
A F A+++I +PTG+KI+ + T+ +I ++ ++ +LAN
Sbjct: 366 AVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPI 425
Query: 207 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 386
+D +H+T ++VAHFH ++ +P G L+ +I + G
Sbjct: 426 LDYQVHNTVFLVAHFHNMVVPGVLFGMLAGYTFWFPKAFGFRLDERWGRISAYCWIFGWM 485
Query: 387 ITFFPQHFLGLAGIPRRYSDY 449
FFP + LGL G+PRR Y
Sbjct: 486 GAFFPLYILGLMGLPRRSVAY 506
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.9 bits (141), Expect = 3e-08
Identities = 38/141 (26%), Positives = 63/141 (44%)
Frame = +3
Query: 27 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSS 206
A+F++A+ ++AVPT +++F + T+ + +L ++A
Sbjct: 318 AFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVP 377
Query: 207 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 386
D +HDTY++VAH HYVL P FTG + F+ + IG +
Sbjct: 378 FDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFTGRKTYFNLGPTAFWLVVIGFH 437
Query: 387 ITFFPQHFLGLAGIPRRYSDY 449
TF H+ GL G+ RR +
Sbjct: 438 GTFLLLHWAGLLGMRRRIDSF 458
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +2
Query: 281 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 460
CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S +T T+ S LI
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTMLSFSSLI 150
Query: 461 YFMK 472
+K
Sbjct: 151 QLLK 154
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3
Query: 15 IDTRAYFTSATIIIAVPTGIKIFR*LAT 98
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/138 (25%), Positives = 60/138 (43%)
Frame = +3
Query: 33 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSID 212
F T++I++P+ + + + T+ + Y+ +L L + S+D
Sbjct: 342 FMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMD 401
Query: 213 ITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNIT 392
+ LHDT +VV HFH+ ++ +P G L + KI F+ F+G+ +
Sbjct: 402 LYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMFGRRLGERLGKIHFWFTFLGLTLV 461
Query: 393 FFPQHFLGLAGIPRRYSD 446
F Q G AG RR D
Sbjct: 462 FGGQLLAGYAGQERRLFD 479
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +3
Query: 207 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSY-ILKIQFFTIFIGV 383
+D T+H+T ++ HFH + + + +P TG +L +++ Q + FIG+
Sbjct: 353 LDTTIHNTQWITGHFHLIFAGAIVTMYFAIAYDLWPHLTGRALTHVRLMRWQLWLWFIGM 412
Query: 384 NITFFPQHFLGLAGIPRR--YSDYPD 455
+T FP H++G+ G+PRR Y DY D
Sbjct: 413 IVTTFPWHWVGILGMPRRMAYYDYGD 438
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 58.4 bits (135), Expect = 1e-07
Identities = 39/135 (28%), Positives = 59/135 (43%)
Frame = +3
Query: 45 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSIDITLH 224
T I++PT + I +AT+ G + + IL ++ +ID +H
Sbjct: 337 TETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVH 396
Query: 225 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQ 404
YYVVAHFHY + +P FTG + + +I + + GVNI +FP
Sbjct: 397 GDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSEKLGRIHWAFAYPGVNILYFPM 456
Query: 405 HFLGLAGIPRRYSDY 449
F L +PRR Y
Sbjct: 457 FF--LYDLPRRVYTY 469
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/139 (25%), Positives = 59/139 (42%)
Frame = +3
Query: 36 TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RXXXXXXXXXXXXXXXILANSSIDI 215
++ T+ IA+P+G+K+ AT++G +I Y + ID
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDY 363
Query: 216 TLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITF 395
L+ TY+VV HFHY++ +P ++G N + K + G +T
Sbjct: 364 ALNGTYFVVGHFHYMVYAILYALLGALFYY-FPFWSGKWYNDDLGKTGAILLVAGTFLTA 422
Query: 396 FPQHFLGLAGIPRRYSDYP 452
G+ G+PRRY+ P
Sbjct: 423 TGMSIAGILGMPRRYAVIP 441
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3
Query: 552 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 659
N+ I LFSLN+ SSIE QN PPAEHSYNELPIL N
Sbjct: 16 NKNIVLFSLNMNSSIEWLQNFPPAEHSYNELPILTN 51
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 56.8 bits (131), Expect = 5e-07
Identities = 42/131 (32%), Positives = 52/131 (39%)
Frame = +2
Query: 80 F*MTSYNTWNSN*L*P*YFMKXXXXXXXXXXXXXXXXXSQFFXXXXXXXXXXXXXXXXXX 259
F MT Y +W++N L P + SQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLR 83
Query: 260 XXXXXXXCNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTI 439
CNY IY L+ + F K KNSI+ NIY SK NIFS TFF +T +
Sbjct: 84 SFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTPPL 143
Query: 440 FRLSRLIYFMK 472
F SRLI +K
Sbjct: 144 FWFSRLILLLK 154
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 56.4 bits (130), Expect = 6e-07
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Frame = +3
Query: 27 AYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RXXXXXXXXXXXXXXXILANS 203
A F++A+ ++AVPT +++F + T+ GT P ++ ++A
Sbjct: 318 ALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVV 376
Query: 204 SIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGV 383
D +HDT+++VAH HYVL P TG + + F+ + +G
Sbjct: 377 PFDWQVHDTHFIVAHLHYVLVGGFVFPMLAALYYWMPHVTGRKRFFRVGDVAFWLVTVGF 436
Query: 384 NITFFPQHFLGLAGIPRRYSDY 449
+ TF H++GL G RR Y
Sbjct: 437 HATFLAVHWVGLLGQRRRTETY 458
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 131
VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 295 VGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/27 (85%), Positives = 27/27 (100%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIF 83
VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 4 VGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 52.0 bits (119), Expect = 1e-05
Identities = 29/75 (38%), Positives = 35/75 (46%)
Frame = +3
Query: 435 RYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQNL 614
RY+DYP+ QR+ LFS+ L SSIE QN
Sbjct: 1 RYADYPEVHTTWNVISTIGSTISFLGILYFFYIIWESLITQRMVLFSIQLCSSIEWLQNS 60
Query: 615 PPAEHSYNELPILRN 659
PPAEHSY+ELP+L N
Sbjct: 61 PPAEHSYSELPLLTN 75
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +3
Query: 555 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 659
QRI LF N+ SSIE +QN PPA HSY+E+PIL N
Sbjct: 28 QRILLFPSNMTSSIEWFQNTPPANHSYDEMPILIN 62
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/80 (31%), Positives = 37/80 (46%)
Frame = +3
Query: 414 GLAGIPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSS 593
GL G+PRRYSDYP+ +++ +F LNL +S
Sbjct: 1 GLNGMPRRYSDYPNNYLTWNIMSSIGSMISTFSIIILIYWLWNSLFLKKMTIFKLNLNNS 60
Query: 594 IE*YQNLPPAEHSYNELPIL 653
I N+PP H+Y+ELP++
Sbjct: 61 IGWIHNMPPIGHTYSELPLI 80
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 552 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 659
+QR +F + L SS+E QN PPAEHSYNELP+L N
Sbjct: 32 SQRQVIFPVQLNSSMEWLQNTPPAEHSYNELPLLVN 67
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 137
VG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 58 VGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +3
Query: 555 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 659
+++ +F LNL +SIE NLPP EHSY+ELP++ N
Sbjct: 33 KKMVMFKLNLNNSIEWIHNLPPLEHSYSELPLVTN 67
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 195 ANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK-IQFFTI 371
A+ +++ +H+T +V HFH + + +P G L S L +Q +
Sbjct: 351 ASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAYKLWPELCGRRLYSVDLALVQLWGW 410
Query: 372 FIGVNITFFPQHFLGLAGIPRRYS 443
FIG+ I P H LGL G PRR S
Sbjct: 411 FIGMVIMTTPWHILGLLGQPRRIS 434
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 43.6 bits (98), Expect = 0.005
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 192 LANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK--IQFF 365
L+ D T HDTYYVVAH HY+ Y L S+ + +
Sbjct: 31 LSQPGADGTYHDTYYVVAHIHYL---GLLALLVVAVGTAYVLLLRRSVPRIAVSGAVAIC 87
Query: 366 TIFIGVNITFFPQHFLGLAGIPRRYSDYPD 455
+ +G PQ L G+PRRY+DY D
Sbjct: 88 MLCLGTAFMVAPQAVLPGGGMPRRYTDYAD 117
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 41.1 bits (92), Expect = 0.024
Identities = 14/36 (38%), Positives = 28/36 (77%)
Frame = +3
Query: 552 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 659
++R+ +F +++P+S+E + PPA+HSY++ P+L N
Sbjct: 23 SKRVYMFHMHMPTSLEWHHPSPPADHSYDDTPLLTN 58
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 40.7 bits (91), Expect = 0.032
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3
Query: 552 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 653
N++I LF +SIE QNLPPAEHSY+ELP +
Sbjct: 21 NRQI-LFPTQTSNSIEWIQNLPPAEHSYSELPTI 53
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 40.3 bits (90), Expect = 0.042
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 189 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK-IQFF 365
I A+ +I++ +H+T ++ HFH + P TG L S + +Q +
Sbjct: 371 INASYNINLVVHNTSWISGHFHLTVGTAVTLSFMGITYWLVPHLTGRRLWSPTMALVQAW 430
Query: 366 TIFIGVNITFFPQHFLGLAGIPRR 437
T F+G+ I H LGL +PRR
Sbjct: 431 TWFVGMGIFSHWMHMLGLLSMPRR 454
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 40.3 bits (90), Expect = 0.042
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 107
VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 59 VGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 40.3 bits (90), Expect = 0.042
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 567 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 659
+FSL+L SSIE + PPA+HSY E+P++ N
Sbjct: 37 MFSLSLASSIEWEHSYPPADHSYMEIPMISN 67
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 40.3 bits (90), Expect = 0.042
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 3 VGIDIDTRAYFTSATIIIAVPTGIKIF 83
VG D+ T +F+S T+II VPTGIK+F
Sbjct: 35 VGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 39.9 bits (89), Expect = 0.056
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 195 ANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSYILKIQFFTI 371
A +I+ +H+T++VV HFH + P TG L + Q
Sbjct: 362 AGMNINYLVHNTWWVVGHFHLTVGTAVALTFMAVSYWFLPQITGKKLWGKSVALAQVVLW 421
Query: 372 FIGVNITFFPQHFLGLAGIPRRYSD 446
F+G+ H GLAG+PRR ++
Sbjct: 422 FVGMTFMSNAMHRSGLAGMPRRTAE 446
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 38.7 bits (86), Expect = 0.13
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +3
Query: 189 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK---IQ 359
I A+ ++ +H+T +VV HFH + P TG + K IQ
Sbjct: 365 INASFQLNEVVHNTLWVVGHFHITVGAPVAMTFYGLTFWLVPYLTGRPFSRLAKKLALIQ 424
Query: 360 FFTIFIGVNITFFPQHFLGLAGIPRR 437
T +G+ + QH LGL G PRR
Sbjct: 425 VITWSLGMFLMSTAQHVLGLLGAPRR 450
>UniRef50_Q6RHX4 Cluster: Cytochrome c oxidase subunit I; n=26;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Partamona helleri
Length = 88
Score = 38.7 bits (86), Expect = 0.13
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = +3
Query: 426 IPRRYSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*Y 605
+PRRYSDYPD ++R+ LF + SS+E
Sbjct: 2 MPRRYSDYPDSYYCWNFISSMGSMISMNSLLFLIFTIFESFMSKRLILFKFH-QSSLEWL 60
Query: 606 QNLPPAEHSYNELPIL 653
N PP H NE+P+L
Sbjct: 61 NNYPPFNHMCNEIPLL 76
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 35.9 bits (79), Expect = 0.91
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -3
Query: 109 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPT 2
VP + +H K LIPVGT +I+V E+K V S PT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPT 86
>UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI
protein - Balanus crenatus
Length = 58
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 552 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELP 647
+QR +FS NL S++E PP HSY+ELP
Sbjct: 22 SQRPTIFSPNLSSNLEWVHTTPPHYHSYDELP 53
>UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV085 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 204
Score = 34.7 bits (76), Expect = 2.1
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 293 GIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIY 463
G+Y +I Y+ + LY K IF +I++ KYN++ + + +N + F +++ I+
Sbjct: 18 GLYDIIP--YKASLSILYNKKIIFNDIFFIKYNLYESRVDKKKFNNAISFLMNKNIF 72
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 32.7 bits (71), Expect = 8.5
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +3
Query: 195 ANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI-QFFTI 371
A +I+ +H+T +V HFH + +P T + S + + Q
Sbjct: 370 AGMNINYMIHNTIWVPGHFHLTVGTAVALTFMAATYWIWPQITNKPIYSRSIGLFQVVLW 429
Query: 372 FIGVNITFFPQHFLGLAGIPRRYSD 446
FIG+ + H G+ G PRR ++
Sbjct: 430 FIGMALMSNAMHAQGILGAPRRTAE 454
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,648,637
Number of Sequences: 1657284
Number of extensions: 6099100
Number of successful extensions: 14754
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 14170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14621
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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