Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0615
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    25   0.84 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   1.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    24   1.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   4.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.8  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 131 RNDFRNPIWGSDDEDDGDELYSRNEMSAIIDPMDLHRDFTKHMHEMFR-SFGSM 289
           R+D    I   DD+ DG E  S +    ++ P  LH    +  H  +  ++GS+
Sbjct: 35  RDDDDENITVDDDDTDGRESLSPSSAHTVLIPQPLHPSVPRLGHPQWPFAWGSL 88


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 17/73 (23%), Positives = 32/73 (43%)
 Frame = -3

Query: 712 HGVHRRVDNVCHRA*CDSLFSYFIAIFNNSPCLYCSIRFLNTCCNNSLTE*SSRYQITIK 533
           HGVH  + N+C  A  +S++ +   +F  S    C  +F   C ++     +        
Sbjct: 215 HGVHNELCNLCQVA--NSIYGFQNFLFVLSTFSICITQFY-YCYDSGFNSDNLTDVYFTL 271

Query: 532 KWFLIGILHVILL 494
           +W  + IL ++ L
Sbjct: 272 QWAFLQILEILAL 284


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 126 RPGTIFETQSGV 161
           RPGT+F TQS +
Sbjct: 505 RPGTVFHTQSNI 516


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 413 DNHREALKQDVDLDGKISSNEISGLLKQKDNMQDANQKPLFNGN 544
           +   E  + D D+ G+I S E +G     D+M D ++K    GN
Sbjct: 171 EKDEEDKRDDTDMHGRIKS-ERNGKDLDDDDMNDDDRKDDLLGN 213


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 45  KFIRLLQPWRTAPLWTNYVRFSVFGKSRPGTIFETQSGVPTMKTTEMN 188
           KF  L++  + +P+   ++  +VFG + PG +          KTT +N
Sbjct: 76  KFFNLIKR-KDSPVQKKHILKNVFGVAYPGELLAILGSSGAGKTTLLN 122


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 45  KFIRLLQPWRTAPLWTNYVRFSVFGKSRPGTIFETQSGVPTMKTTEMN 188
           KF  L++  + +P+   ++  +VFG + PG +          KTT +N
Sbjct: 76  KFFNLIKR-KDSPVQKKHILKNVFGVAYPGELLAILGSSGAGKTTLLN 122


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 164 DDEDDGDELYSRNEMSAIIDPMDLH 238
           DD+DD D   S N+        D+H
Sbjct: 290 DDDDDDDMSNSENQNPRFTSSPDMH 314


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +2

Query: 296 DVQSFFHDENFDFPGISDLPSDEGSNHGNIRDYYLKPGY 412
           D++ +     + +  +S LPS   S+     DYY  P Y
Sbjct: 384 DIKMYADMHQYGYNTLSPLPSSVHSHSTIGNDYYNSPLY 422


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
 Frame = +2

Query: 242  DFTKHMHEMFRSFGSMFGDVQSFFH---DENFDFPGIS 346
            DF K +HE F+  G +     S      D  +D P +S
Sbjct: 1967 DFVKELHEAFKPKGWLLSAAVSPSRRVVDAGYDVPTLS 2004


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,498
Number of Sequences: 336
Number of extensions: 4649
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)