Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0615
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 35 0.052
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 33 0.28
AC024205-3|AAF36045.1| 308|Caenorhabditis elegans Hypothetical ... 32 0.37
Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical p... 30 1.5
Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical p... 30 1.5
Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic s... 30 1.5
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 2.6
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 29 2.6
AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin p... 29 2.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.4
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 29 3.4
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 29 4.5
Z81117-3|CAB03318.1| 334|Caenorhabditis elegans Hypothetical pr... 28 6.0
U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical pr... 28 7.9
U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans homeo... 28 7.9
U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily ass... 28 7.9
U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily ass... 28 7.9
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 28 7.9
U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical p... 28 7.9
U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical ... 28 7.9
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 35.1 bits (77), Expect = 0.052
Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Frame = +2
Query: 224 PMDLHRDFTKHMHEMFRS----FGSMFGDVQSF---FHDENFDFPGISDLPSDEGSNHGN 382
P +HR H H+MFRS F FG+ F F D+ F FP D+ S +
Sbjct: 86 PGGMHR---MHSHDMFRSPFDIFREFFGNRDPFENVFFDDAFTFP---DVDSYAFKHPPR 139
Query: 383 IRDYYLKPGYDNHREALKQDVDLDGKISSNEISGLLKQKDNMQDANQKPLFNGNLVPGRS 562
D+ K Y HR + V + + N K++D+ + F+ PG++
Sbjct: 140 SADFTTKNHY--HRFPSSR-VHIFYDENKNT-----KERDDKNTFSTVIRFSSPTEPGKN 191
Query: 563 FCQTIITTSVKKPDGTVETRRIVKNGNEVTEETVTSGPV---TNIVNPTMDTMTPSFI 727
+TS K DG + V+NG+E E G + T PT T+T + I
Sbjct: 192 ATVRKTSTSTKLVDGKKIVTKTVENGDEHIVEVHEDGELKCRTVTTPPTSPTVTVAAI 249
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +3
Query: 135 TIFETQSGVPTMKTTEMNYTLGTRCPLS*IQWTSTEISPNICTKCFDRLEACSVTYSHFS 314
T+ T + T+ T+ T S TST I T + S T +
Sbjct: 285 TVTSTVTSTTTVPTSTSTVTTAMSTSTS-TPSTSTTIESTSTTFTSTASTSTSSTSTTQQ 343
Query: 315 TTKTLIFPESATCLPTKVPTTVTSEIT 395
++ T+ S+T L T +PTT T EIT
Sbjct: 344 SSSTITSSPSSTTLSTSIPTTTTPEIT 370
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +3
Query: 135 TIFETQSGVPTMKTTEMNYTLGTRCPLS*IQWTSTEISPNICTKCFDRLEACSVTYSHFS 314
T+ T + T+ T+ T S TST I T + S T +
Sbjct: 285 TVTSTVTSTTTVPTSTSTVTTAMSTSTS-TPSTSTTIESTSTTFTSTASTSTSSTSTTQQ 343
Query: 315 TTKTLIFPESATCLPTKVPTTVTSEIT 395
++ T+ S+T L T +PTT T EIT
Sbjct: 344 SSSTITSSPSSTTLSTSIPTTTTPEIT 370
>AC024205-3|AAF36045.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.2 protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +2
Query: 260 HEMFRSFGSMFGDVQSFFHDENFDFPGISDLPSDEGSNHGNIRDYYLKPGYDNHREALKQ 439
H F+ S D+ F N+ PG S+ P EG H N P N AL
Sbjct: 58 HNDFKYIRSKLDDLNIRFIGVNY--PGFSNTPEYEGQQHAN-------PERQNFSNALLD 108
Query: 440 DVDLDGKI 463
++ +DGKI
Sbjct: 109 ELKIDGKI 116
>Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical
protein T05C12.6c protein.
Length = 625
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 VQSFFHDENFDFPGISDLPSDEG-SNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNE 475
++ F++ ++ P +S + + EG + GN ++ + K GY + + L D+ + K+
Sbjct: 12 IKVFYYLDDETTPYVSVIEAREGVATLGNFKNSFTKRGYKYYAKELDPDIQREVKVELTT 71
Query: 476 ISGLLKQKDN 505
S L++ N
Sbjct: 72 DSDRLRKSQN 81
>Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical
protein T05C12.6b protein.
Length = 666
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 VQSFFHDENFDFPGISDLPSDEG-SNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNE 475
++ F++ ++ P +S + + EG + GN ++ + K GY + + L D+ + K+
Sbjct: 12 IKVFYYLDDETTPYVSVIEAREGVATLGNFKNSFTKRGYKYYAKELDPDIQREVKVELTT 71
Query: 476 ISGLLKQKDN 505
S L++ N
Sbjct: 72 DSDRLRKSQN 81
>Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical
protein T05C12.6a protein.
Length = 672
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 VQSFFHDENFDFPGISDLPSDEG-SNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNE 475
++ F++ ++ P +S + + EG + GN ++ + K GY + + L D+ + K+
Sbjct: 12 IKVFYYLDDETTPYVSVIEAREGVATLGNFKNSFTKRGYKYYAKELDPDIQREVKVELTT 71
Query: 476 ISGLLKQKDN 505
S L++ N
Sbjct: 72 DSDRLRKSQN 81
>AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 666
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 VQSFFHDENFDFPGISDLPSDEG-SNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNE 475
++ F++ ++ P +S + + EG + GN ++ + K GY + + L D+ + K+
Sbjct: 12 IKVFYYLDDETTPYVSVIEAREGVATLGNFKNSFTKRGYKYYAKELDPDIQREVKVELTT 71
Query: 476 ISGLLKQKDN 505
S L++ N
Sbjct: 72 DSDRLRKSQN 81
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +3
Query: 213 LS*IQWTSTEISPNICTKCFDRLEACSVTYSHFSTTKTLIFPESATCLPTKVPTTVTSEI 392
+S + T+ + S + T + A + T +TT+T S T + T+ PTTVTS
Sbjct: 373 ISDVPTTTVQTSTTVPTTP-SKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTT 431
Query: 393 TI*NPAMTITER 428
T+ + + T +
Sbjct: 432 TLPSTTASTTTK 443
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/92 (31%), Positives = 39/92 (42%)
Frame = +3
Query: 147 TQSGVPTMKTTEMNYTLGTRCPLS*IQWTSTEISPNICTKCFDRLEACSVTYSHFSTTKT 326
TQ+ P K T + T T P++ T T P T L +V + T
Sbjct: 535 TQTTAPVTKPTVPSSTTQTAPPVT----TPTSQPPVTTTSLLTTLTTPTVPVT------T 584
Query: 327 LIFPESATCLPTKVPTTVTSEITI*NPAMTIT 422
+ P SAT +PT PTTVT T + A +T
Sbjct: 585 TVVPSSAT-VPTTPPTTVTVAATTTSKAPVVT 615
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/92 (31%), Positives = 39/92 (42%)
Frame = +3
Query: 147 TQSGVPTMKTTEMNYTLGTRCPLS*IQWTSTEISPNICTKCFDRLEACSVTYSHFSTTKT 326
TQ+ P K T + T T P++ T T P T L +V + T
Sbjct: 591 TQTTAPVTKPTVPSSTTQTAPPVT----TPTSQPPVTTTSLLTTLTTPTVPVT------T 640
Query: 327 LIFPESATCLPTKVPTTVTSEITI*NPAMTIT 422
+ P SAT +PT PTTVT T + A +T
Sbjct: 641 TVVPSSAT-VPTTPPTTVTVAATTTSKAPVVT 671
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
protein C16A3.3 protein.
Length = 1743
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 289 HASKRSKHFVHMFGEISVEVHWIYDSGHLVP 197
HAS+ SK F +F E +E+ + G +VP
Sbjct: 100 HASEVSKKFTELFNEEKIEIKNAFQLGQMVP 130
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 122 EPPRNDFRNPIWGSDDEDDGDE 187
EPP ND R S+DEDD DE
Sbjct: 517 EPPTNDERLVFSSSEDEDDDDE 538
>AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin
protein 17 protein.
Length = 438
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 569 QTIITTSVKKPDGTVETRRIVKNGNEVTEETVTSGPVTNIVNPTMDTMTPS 721
+T ITT+ P+ E I + E+T T + PV +VN TP+
Sbjct: 225 KTRITTTTMAPEEVPEEEVIPEEEEEITTTTRKTRPVKKVVNTFRQKPTPA 275
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/92 (29%), Positives = 34/92 (36%)
Frame = +3
Query: 147 TQSGVPTMKTTEMNYTLGTRCPLS*IQWTSTEISPNICTKCFDRLEACSVTYSHFSTTKT 326
T + PT TTE T T + T+T +P T T + TT T
Sbjct: 127 TTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 186
Query: 327 LIFPESATCLPTKVPTTVTSEITI*NPAMTIT 422
P + T PT TT T+ T P T T
Sbjct: 187 TT-PTTTTTAPTTTTTTPTTTTT--TPTTTTT 215
Score = 27.9 bits (59), Expect = 7.9
Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +3
Query: 147 TQSGVPTMKTTEMNYTLGTRCPLS*IQWTSTEISPNICTKCFDRLEACSVTYSHFSTTKT 326
T + PT TT T T P + T+T + T + T + +TT T
Sbjct: 177 TTTTTPTTTTTTPTTT--TTAPTT----TTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTT 230
Query: 327 LIFPESATCLPTKV--PTTVTSEITI*NPAMT 416
P + T PT P T TSE T P T
Sbjct: 231 TTTPTTTTTTPTTTTTPATTTSETTTTTPTTT 262
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 312 STTKTLIFPESATCLPTKVPTTVTSEITI*NPAMTIT 422
+TT+T P+S T T PTT TS T A T T
Sbjct: 201 TTTETTTTPQSTTTTTTVPPTTTTSTTTTTTIATTTT 237
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +2
Query: 191 YSRNEMSAIIDPMDLHRDFTKHMHEMFRSFGSMFGDVQSFFHDENFDFPGISDLPSDEGS 370
+ R + A+ +P+ F +H + M + VQ D + PGIS +P+ GS
Sbjct: 102 FQRGQSLALSNPIPTQNAFWQHNNSMATT------SVQ----DYDLMQPGISRIPTGTGS 151
Query: 371 NHGNIRDY-YLKPGYDNHREALKQDVD 448
R+Y LK YD E L Q ++
Sbjct: 152 GLNIAREYEQLKVEYDTMMEKLNQTMN 178
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 285 ACSVTYSHFSTTKTLIFPESATCLPTKVPTTVTSEITI*NPAMTITER 428
A + T +TT+T S T + T+ PTTVTS T+ + + T +
Sbjct: 515 ATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTK 562
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 285 ACSVTYSHFSTTKTLIFPESATCLPTKVPTTVTSEITI*NPAMTITER 428
A + T +TT+T S T + T+ PTTVTS T+ + + T +
Sbjct: 356 ATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTK 403
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 368 SNHGNIRDYYLKPGY--DNHREALKQDVDLDGKISSNEISGLLKQKDNMQ 511
S + +I DY+L PG D+ E +Q+V+L IS G + QK N++
Sbjct: 256 STYKDISDYFLNPGQLSDSEFEGDQQEVELPQDISEGRGCG-VGQKSNVR 304
>Z81117-3|CAB03318.1| 334|Caenorhabditis elegans Hypothetical
protein T06E6.9 protein.
Length = 334
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -1
Query: 669 DVTVSSVTSLPFLTILLVSTVPSGFLT 589
D+TV+++T + FL ++ TVP GFLT
Sbjct: 58 DITVTALT-ITFLVFPVLGTVPLGFLT 83
>U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical
protein C03B1.7 protein.
Length = 818
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 575 IITTSVKKPDGTVETRRIVKNGNEVTEETVTSGPVTNI 688
+I T++K D +ET N N+ E + S VTN+
Sbjct: 362 VIHTNIKPKDICIETEYPANNDNKKKSEVMFSSTVTNV 399
>Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical
protein E02A10.1 protein.
Length = 418
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 476 ISGLLKQKDNMQDANQKPLFNGNLVPGRSFCQTIITTSVKKPDGTVET 619
++GLL Q+ + Q A +K L + P R F I+ + + T ET
Sbjct: 269 VTGLLNQETHQQLAERKGLHVVEMSPSRHFLPQIVASPISTELKTEET 316
>Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical
protein E02A10.1 protein.
Length = 418
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 476 ISGLLKQKDNMQDANQKPLFNGNLVPGRSFCQTIITTSVKKPDGTVET 619
++GLL Q+ + Q A +K L + P R F I+ + + T ET
Sbjct: 269 VTGLLNQETHQQLAERKGLHVVEMSPSRHFLPQIVASPISTELKTEET 316
>U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans homeobox
protein 31 protein.
Length = 223
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 21 VELLHIDKKFIRLLQPWRTAPLWTNYV--RFSVFGKSRPGTIFETQSGVPT 167
++LLH + Q RT P W NY+ S+FG S +F + VPT
Sbjct: 120 MDLLHDAGNMAAVQQLLRTNPYWANYLSQNTSMFGASNNRPVFNSLV-VPT 169
>U41993-8|AAA83449.1| 497|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform a protein.
Length = 497
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +2
Query: 140 FRNPIWGSDDEDDGDELYSRNEMSAIIDPMDLHRDFTKHMHEMFRSFGS 286
F NP + + ++LY + + I+ M +H+ H+ +S GS
Sbjct: 430 FDNPFGTNPTGNTAEDLYRQQMYAMIVQKMQMHQQQQFQQHQQLQSGGS 478
>U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform b protein.
Length = 733
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +2
Query: 140 FRNPIWGSDDEDDGDELYSRNEMSAIIDPMDLHRDFTKHMHEMFRSFGS 286
F NP + + ++LY + + I+ M +H+ H+ +S GS
Sbjct: 666 FDNPFGTNPTGNTAEDLYRQQMYAMIVQKMQMHQQQQFQQHQQLQSGGS 714
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 440 DVDLDGKISSNEISGLLK 493
DVD DG++S NEI+ LL+
Sbjct: 32 DVDKDGRLSRNEIAALLR 49
>U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical
protein F08F8.10a protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/106 (27%), Positives = 48/106 (45%)
Frame = +3
Query: 78 APLWTNYVRFSVFGKSRPGTIFETQSGVPTMKTTEMNYTLGTRCPLS*IQWTSTEISPNI 257
AP ++ F+ FG++ P + T G+P T + T P+ +Q S++ +
Sbjct: 203 APAPSSLSSFNPFGQTSPSSALTTAFGIPPPTTYSSHQQSSTYSPI--VQSISSQPTAGF 260
Query: 258 CTKCFDRLEACSVTYSHFSTTKTLIFPESATCLPTKVPTTVTSEIT 395
T + +L S+FST+ F SA P VPT V E++
Sbjct: 261 -TNPYSQLA------SNFSTSS---FDSSAPVSP--VPTQVALEVS 294
>U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical
protein F08F8.10b protein.
Length = 484
Score = 27.9 bits (59), Expect = 7.9
Identities = 29/106 (27%), Positives = 48/106 (45%)
Frame = +3
Query: 78 APLWTNYVRFSVFGKSRPGTIFETQSGVPTMKTTEMNYTLGTRCPLS*IQWTSTEISPNI 257
AP ++ F+ FG++ P + T G+P T + T P+ +Q S++ +
Sbjct: 200 APAPSSLSSFNPFGQTSPSSALTTAFGIPPPTTYSSHQQSSTYSPI--VQSISSQPTAGF 257
Query: 258 CTKCFDRLEACSVTYSHFSTTKTLIFPESATCLPTKVPTTVTSEIT 395
T + +L S+FST+ F SA P VPT V E++
Sbjct: 258 -TNPYSQLA------SNFSTSS---FDSSAPVSP--VPTQVALEVS 291
>AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical
protein C44B12.5 protein.
Length = 397
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 89 DKLRSFLGIRQEPPRNDFRNPIWGSDDEDDGD 184
D+L FL I ++ F+ G+DD+DD D
Sbjct: 206 DQLFGFLAITKDDDDETFKRSKRGADDDDDND 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,283,626
Number of Sequences: 27780
Number of extensions: 425473
Number of successful extensions: 1540
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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