Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0615
(735 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19930.1 68415.m02329 RNA-dependent RNA polymerase family pro... 35 0.064
At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam PF05... 33 0.26
At1g66400.1 68414.m07541 calmodulin-related protein, putative si... 32 0.34
At1g63980.1 68414.m07247 D111/G-patch domain-containing protein ... 30 1.4
At1g55550.1 68414.m06358 kinesin motor protein-related Similar t... 30 1.8
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 30 1.8
At1g73450.1 68414.m08503 protein kinase, putative similar to nuc... 29 4.2
At4g17895.1 68417.m02667 ubiquitin-specific protease 20, putativ... 28 5.6
At3g18215.1 68416.m02317 expressed protein contains Pfam profile... 28 5.6
At3g01510.1 68416.m00077 5'-AMP-activated protein kinase beta-1 ... 28 5.6
At2g27830.1 68415.m03374 expressed protein 28 5.6
At2g15420.1 68415.m01764 myosin heavy chain-related 28 5.6
At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy cha... 28 5.6
At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative simila... 28 7.4
At4g08810.1 68417.m01450 expressed protein 28 7.4
At3g29075.1 68416.m03637 glycine-rich protein 28 7.4
At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein ... 27 9.8
At5g14550.2 68418.m01706 expressed protein contains Pfam profile... 27 9.8
At5g14550.1 68418.m01705 expressed protein contains Pfam profile... 27 9.8
At4g36920.1 68417.m05233 floral homeotic protein APETALA2 (AP2) ... 27 9.8
At4g25970.1 68417.m03737 phosphatidylserine decarboxylase, putat... 27 9.8
At3g11440.1 68416.m01395 myb family transcription factor (MYB65)... 27 9.8
At2g10440.1 68415.m01097 hypothetical protein 27 9.8
At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase fa... 27 9.8
At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase fa... 27 9.8
>At2g19930.1 68415.m02329 RNA-dependent RNA polymerase family protein
contains Pfam domain, PF05183: RNA dependent RNA
polymerase
Length = 977
Score = 34.7 bits (76), Expect = 0.064
Identities = 30/112 (26%), Positives = 46/112 (41%)
Frame = +2
Query: 164 DDEDDGDELYSRNEMSAIIDPMDLHRDFTKHMHEMFRSFGSMFGDVQSFFHDENFDFPGI 343
D GD++Y N++ I P + RD + G +F V+S +E I
Sbjct: 792 DAPKKGDKVYLPNKLKPDIFPHYMERD---KKFQSTSILGLIFDFVKSQTTEEPSPSSEI 848
Query: 344 SDLPSDEGSNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNEISGLLKQK 499
S LP E + YDN+R + Q + D S+NE+ KQ+
Sbjct: 849 SKLPCFEDEPVSEFHMQKCRLWYDNYRTEMTQAMKTDKDESANEVIQRYKQE 900
>At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1131
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 299 VQSFFHDENFDFPGISDLPSDEGSNHGNIRDYYLKPGYDNHREALK 436
V F HD N +FPG S + +E + I++ + +DN E++K
Sbjct: 659 VNEFLHDGNLNFPGGSTVKDEEDNLKRRIKETMERAFWDNVMESMK 704
>At1g66400.1 68414.m07541 calmodulin-related protein, putative
similar to calmodulin-related protein 2, touch-induced
from SP:P25070 [Arabidopsis thaliana]; contains Pfam
profile: PF00036 EF hand (4 copies)
Length = 157
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Frame = +2
Query: 356 SDEGSNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNEISGLLK---QKDNMQDANQ 523
SD+ SN+ IRD LK +D + D+D +G+IS+NE+ ++K +K ++QD +
Sbjct: 79 SDQSSNNSAIRD--LKEAFDLY------DLDRNGRISANELHSVMKNLGEKCSIQDCQR 129
>At1g63980.1 68414.m07247 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 391
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 53 KVTTAMANSAFMDKLRSFLGIRQEPPRNDFRNPIWGSDDEDDGDE 187
K T D+ + G+R E + F N DD+DD DE
Sbjct: 234 KATAGKQGLGIKDRPKKIAGVRYEGKKTSFDNSDDDDDDDDDDDE 278
>At1g55550.1 68414.m06358 kinesin motor protein-related Similar to
Kinesin proteins; Contains kinesin motor domain protein
motif and kinesin heavy chain signature motif
Length = 887
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +2
Query: 446 DLDGKISSNEISGLLKQKDNMQDANQKPLFNGNLVPGRSFCQTIITTSVKKPDGTVETRR 625
D+ KI E S + + Q N+ + + +P F + + + K P + T +
Sbjct: 621 DVMQKIGGTEFSRINSWLRS-QSENRSYVLDKTQLPATHFLENLNRSLEKSPTQSFTTEK 679
Query: 626 IVKNGNEVTEETVTSGPVTNIVNPTM 703
I N E EET T+ +VNPT+
Sbjct: 680 ITGNELEGIEETKTN---ETVVNPTL 702
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin
family
Length = 1919
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 374 HGNIRDYYLKPGYDNHREALKQDVDLD---GKISSNEISGLLKQK 499
HG++R P Y + E+ + +D+D GK SS+E SGL K K
Sbjct: 1405 HGHMRTNKHCPRYRENTESQPEGIDMDKSAGKPSSSEPSGLPKLK 1449
>At1g73450.1 68414.m08503 protein kinase, putative similar to
nuclear serine/threonine protein kinase GI:3582644 from
[Rattus norvegicus]
Length = 1152
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 137 DFRNPIWGSDD-EDDGDELYSR 199
D+RN W SD+ EDDGD Y R
Sbjct: 418 DYRNEYWDSDEYEDDGDIGYVR 439
>At4g17895.1 68417.m02667 ubiquitin-specific protease 20, putative
(UBP20) identical to ubiquitin-specific protease 20
GI:11993480 [Arabidopsis thaliana]
Length = 695
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 146 NPIWGSDDEDDGDELYSRNE 205
+P +GSDD+DD D+ S+NE
Sbjct: 136 SPGFGSDDDDDNDDDNSKNE 155
>At3g18215.1 68416.m02317 expressed protein contains Pfam profile
PF04654: Protein of unknown function, DUF599
Length = 244
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 206 MSAIIDPMDLHRDFTKHMH-EMFR-SFGSMFGDVQSFFH 316
MS+I+ +D FT+H+H + FR + SM G+++S H
Sbjct: 204 MSSILYFLDTTTSFTRHLHSQSFRETADSMDGEIESAVH 242
>At3g01510.1 68416.m00077 5'-AMP-activated protein kinase beta-1
subunit-related contains similarity to Swiss-Prot:P80387
5'-AMP-activated protein kinase, beta-1 subunit (AMPK
beta-1 chain) (AMPKb) (40 kDa subunit) [Sus scrofa]
Length = 591
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 258 CTKCFDRLEACSVTYSHFSTTKTL 329
CT FDR AC + Y H+ T +L
Sbjct: 390 CTTGFDRSSACVIAYLHWMTDTSL 413
>At2g27830.1 68415.m03374 expressed protein
Length = 190
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 687 MFVTGPDVTVSSVTSL-PFLTILLVSTVPSGFLTLVVIIV 571
+F TG +TV SL P LT LL++ G L V II+
Sbjct: 50 LFSTGQSITVPETVSLPPRLTKLLLNVTVQGSLGAVQIII 89
>At2g15420.1 68415.m01764 myosin heavy chain-related
Length = 957
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 272 RSFGSM--FGDVQSFFHD-ENFDFPGISDLPSDEGSNHGNIRDYYLKPGYDN 418
R FG FG+ S+ +D EN D ISD + G N G + ++ G+DN
Sbjct: 282 RDFGGFNDFGEEVSYVYDCENVDEDYISDPEGELGEN-GGLGRLMMENGFDN 332
>At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy
chain-related similar to SP|Q61704 Inter-alpha-trypsin
inhibitor heavy chain H3 precursor {Mus musculus};
contains Pfam profile PF00092: von Willebrand factor
type A domain
Length = 754
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +2
Query: 464 SSNEISGLLKQKDNMQDANQKPLFNGNLVPG-----RSFCQTIITTSVKKPDGTVETRRI 628
SSN + GL Q + D +Q+ +F+ L PG ++F + ++ T +
Sbjct: 287 SSNIVGGLFLQSAPVHDVDQRDIFSFYLFPGKQQKTKAFKREVVFVVDISKSMTGKPLED 346
Query: 629 VKNGNEVTEETVTSGPVTNIVNPTMDT 709
VKN + G NI+ + DT
Sbjct: 347 VKNAISTALSKLDPGDSFNIITFSNDT 373
>At5g20320.1 68418.m02418 DEAD/DEAH box helicase, putative similar to
CAF protein [Arabidopsis thaliana] GI:6102610; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain, PF03368: Domain of
unknown function, PF00636: RNase3 domain, PF00035:
Double-stranded RNA binding motif
Length = 1676
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 519 LASCMLSFCFKSPDISLEDIFP 454
+ +C+ S FK+P + +EDIFP
Sbjct: 940 IRNCLSSPIFKTPSVLVEDIFP 961
>At4g08810.1 68417.m01450 expressed protein
Length = 552
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 289 HASKRSKHFVHMFGEISVEVHWIYDSGHLV 200
HA +SK +++ EIS ++ W +D+ H+V
Sbjct: 397 HALWKSKRLMNIVSEISGKMDWDFDAVHVV 426
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 27.9 bits (59), Expect = 7.4
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 9/119 (7%)
Frame = +2
Query: 191 YSRNEMSAIIDPMDLHRDFTKHMHEMFRSFGSMFGDVQSFFHDENFDFPGISDLPSDEGS 370
+S N S+ D L +++ + GS FG + + + S+ GS
Sbjct: 61 FSSNHDSSAYDDQALKTEYSSYARPGPVGSGSDFGRKPNSGYGGRTEVEYGRKTESEHGS 120
Query: 371 NHGN-IRDYYLKPGY--------DNHREALKQDVDLDGKISSNEISGLLKQKDNMQDAN 520
+G I Y+KP Y D H++ +D D DG S + K+KD +D N
Sbjct: 121 GYGGRIESDYVKPSYGGHEDDGDDGHKKHSGKDYD-DGDEKSKK-KEKEKKKDKKKDGN 177
>At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 407
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 113 IRQEPPRNDFRNPIWGSDDEDDGDELYSRNEMSAIIDPMDLHRDFTKHMHEMFRSFGS 286
I++EPPRN W +E D + R + + D +D+ D K + GS
Sbjct: 290 IKEEPPRNITLATTWERPEEADEENREERRQ--KVEDDLDIDEDVMKLQQRLNDEEGS 345
>At5g14550.2 68418.m01706 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 346
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -3
Query: 343 DSGKIKVFVVEK*LYVTEHASKRSKHFVHMFGEISVEVHW 224
+ GK ++V + +V A+ RSK+F+ S++V W
Sbjct: 89 EDGKFSIYVHSRPGFVLNEATTRSKYFLDRQLNDSIQVDW 128
>At5g14550.1 68418.m01705 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 377
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -3
Query: 343 DSGKIKVFVVEK*LYVTEHASKRSKHFVHMFGEISVEVHW 224
+ GK ++V + +V A+ RSK+F+ S++V W
Sbjct: 89 EDGKFSIYVHSRPGFVLNEATTRSKYFLDRQLNDSIQVDW 128
>At4g36920.1 68417.m05233 floral homeotic protein APETALA2 (AP2)
Identical to (SP:P47927) Floral homeotic protein
APETALA2. [Mouse-ear cress] {Arabidopsis thaliana}
Length = 432
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/86 (24%), Positives = 35/86 (40%)
Frame = +2
Query: 317 DENFDFPGISDLPSDEGSNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNEISGLLKQ 496
+ N FPG S++ S G + L P +NHR DG+ S+N++
Sbjct: 352 NSNHQFPGSSNIGSGGG--------FSLFPAAENHR--------FDGRASTNQVLTNAAA 395
Query: 497 KDNMQDANQKPLFNGNLVPGRSFCQT 574
+ +FN P +++ QT
Sbjct: 396 SSGFSPHHHNQIFNSTSTPHQNWLQT 421
>At4g25970.1 68417.m03737 phosphatidylserine decarboxylase, putative
similar to SP|P53037 Phosphatidylserine decarboxylase
proenzyme 2 precursor (EC 4.1.1.65) {Saccharomyces
cerevisiae}; contains Pfam profile PF02666:
phosphatidylserine decarboxylase
Length = 635
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 440 DVDLDGKISSNEISGLLKQKDNMQDANQK 526
D D DGK+S +E S L+ N+ AN+K
Sbjct: 188 DYDEDGKLSFSEFSDLMNAFGNVVAANKK 216
>At3g11440.1 68416.m01395 myb family transcription factor (MYB65)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 553
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 649 N*RDCHIRPCDKHCQPYDGHH 711
N R C I PCD PY+ H
Sbjct: 276 NPRSCSISPCDVDHHPYENQH 296
>At2g10440.1 68415.m01097 hypothetical protein
Length = 935
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 171 KTTEMNYTLGTRCPLS*IQWTSTEISPNICTKCFDRLEACSVTYSHFSTTKTLIFPESAT 350
K E Y++ T + QW N+C CF ++ S FS T T +AT
Sbjct: 63 KFEENFYSIATDKTTTSQQWLQQNTQSNLCVICF--AKSGPYNRSRFSKTDTCSVTAAAT 120
Query: 351 CLPTKVPTTVTS 386
V TT ++
Sbjct: 121 SSAKFVETTYST 132
>At1g49340.2 68414.m05531 phosphatidylinositol 3- and 4-kinase
family protein contains similarity to
phosphatidylinositol 4-kinase 230 GI:2326227 from [Homo
sapiens], from [Bos taurus] GI:2198791; contains Pfam
profiles PF00454: Phosphatidylinositol 3- and 4-kinase,
PF00613: Phosphoinositide 3-kinase family, accessory
domain
Length = 2028
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 663 TVSSVTSLPFLTILLVSTVPSGFLTL 586
+V S TS P T V T+P+GFLT+
Sbjct: 589 SVESKTSAPEATTERVETLPAGFLTI 614
>At1g49340.1 68414.m05530 phosphatidylinositol 3- and 4-kinase
family protein contains similarity to
phosphatidylinositol 4-kinase 230 GI:2326227 from [Homo
sapiens], from [Bos taurus] GI:2198791; contains Pfam
profiles PF00454: Phosphatidylinositol 3- and 4-kinase,
PF00613: Phosphoinositide 3-kinase family, accessory
domain
Length = 2028
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 663 TVSSVTSLPFLTILLVSTVPSGFLTL 586
+V S TS P T V T+P+GFLT+
Sbjct: 589 SVESKTSAPEATTERVETLPAGFLTI 614
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,166,495
Number of Sequences: 28952
Number of extensions: 392762
Number of successful extensions: 1312
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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