Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0612
(660 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 171 3e-43
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 72 4e-13
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 64 1e-10
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 63 2e-10
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 62 3e-10
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 62 4e-10
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 60 1e-09
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 60 1e-09
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 59 2e-09
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 59 2e-09
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 59 3e-09
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 59 3e-09
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 58 4e-09
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 58 5e-09
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 58 7e-09
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 58 7e-09
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 57 1e-08
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 57 1e-08
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 56 2e-08
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 56 2e-08
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 56 2e-08
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 56 2e-08
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 55 4e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 55 4e-08
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 54 6e-08
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 54 1e-07
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 53 1e-07
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 53 1e-07
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 53 1e-07
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 53 1e-07
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 53 2e-07
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 52 3e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 52 3e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 52 3e-07
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 51 8e-07
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 51 8e-07
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 51 8e-07
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 51 8e-07
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 51 8e-07
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 51 8e-07
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 50 1e-06
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 50 2e-06
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 50 2e-06
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 50 2e-06
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 49 3e-06
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 49 3e-06
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 49 3e-06
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 49 3e-06
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 49 3e-06
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 48 6e-06
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 48 6e-06
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 48 6e-06
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 48 7e-06
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 48 7e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 46 2e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 46 3e-05
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 45 4e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 45 4e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 45 4e-05
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 45 4e-05
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 45 4e-05
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 44 7e-05
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 44 7e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 44 9e-05
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 44 9e-05
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 44 9e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 44 1e-04
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 43 2e-04
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 43 2e-04
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 43 2e-04
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 43 2e-04
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 43 2e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 43 2e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 42 3e-04
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 42 3e-04
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 42 3e-04
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 42 3e-04
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 42 3e-04
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 42 3e-04
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 42 3e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 42 3e-04
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 42 5e-04
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 42 5e-04
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 42 5e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 41 6e-04
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 41 6e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 41 6e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 41 6e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 41 8e-04
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 41 8e-04
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 40 0.001
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 40 0.001
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 40 0.002
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 40 0.002
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 40 0.002
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 39 0.003
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 39 0.003
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 39 0.003
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 39 0.003
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 39 0.003
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 39 0.003
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 38 0.004
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 38 0.004
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 38 0.004
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 38 0.004
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 38 0.004
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 38 0.004
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 38 0.006
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 38 0.006
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 38 0.006
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 38 0.008
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 38 0.008
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 38 0.008
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 37 0.010
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 37 0.010
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 37 0.010
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 37 0.010
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 37 0.010
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 37 0.014
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 37 0.014
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 37 0.014
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 36 0.018
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 36 0.018
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 36 0.018
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 36 0.018
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 36 0.024
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 36 0.024
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 36 0.024
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 36 0.024
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 36 0.024
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 36 0.024
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 35 0.042
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 35 0.042
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 35 0.055
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 35 0.055
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 35 0.055
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 35 0.055
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 34 0.073
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 34 0.096
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 34 0.096
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 34 0.096
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 34 0.096
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 34 0.096
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 33 0.13
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 33 0.13
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 33 0.13
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 33 0.13
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 33 0.17
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 33 0.17
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 33 0.22
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 33 0.22
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 33 0.22
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 33 0.22
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 33 0.22
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 33 0.22
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 33 0.22
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 33 0.22
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 32 0.29
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 32 0.39
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 32 0.39
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 32 0.39
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 32 0.39
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 32 0.39
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 31 0.51
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 31 0.51
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 31 0.51
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 31 0.68
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 31 0.68
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 31 0.68
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 0.68
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 0.68
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 31 0.90
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 31 0.90
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 30 1.2
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 30 1.6
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 30 1.6
At1g17390.1 68414.m02122 hypothetical protein 30 1.6
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 29 2.1
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 29 2.7
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 29 2.7
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 29 2.7
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 29 2.7
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 29 2.7
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 29 2.7
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 29 2.7
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 29 2.7
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 29 3.6
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 29 3.6
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 29 3.6
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 29 3.6
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 29 3.6
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 29 3.6
At1g50360.1 68414.m05645 myosin family protein contains Pfam pro... 29 3.6
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 29 3.6
At5g28350.2 68418.m03443 expressed protein 28 4.8
At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3 ... 28 6.3
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 28 6.3
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 28 6.3
At3g61480.1 68416.m06885 expressed protein 28 6.3
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 27 8.4
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 27 8.4
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 171 bits (417), Expect = 3e-43
Identities = 76/146 (52%), Positives = 102/146 (69%), Gaps = 2/146 (1%)
Frame = +3
Query: 144 TREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQ--DFIFKGHTGSVDQL 317
+REY H KVHSV W+ +G KLASGS D++ I+N+E S+ D KGHT SVDQL
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 318 CWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
CW H DL++TASGDKSVR+WD RS KC + GENINI + P+G +AVGN++D +
Sbjct: 73 CWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDEL 132
Query: 498 SFIDTKTYKVVTEEQFNFEVNEISWN 575
+ +D + +K + +FN+EVNEI+WN
Sbjct: 133 TILDVRKFKPLHRRKFNYEVNEIAWN 158
Score = 34.3 bits (75), Expect = 0.073
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 586 DLFFLTNGLGCVHIMTYPSLE 648
D FFLT GLG V +++YPSL+
Sbjct: 162 DFFFLTTGLGTVEVLSYPSLK 182
Score = 30.3 bits (65), Expect = 1.2
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 4/172 (2%)
Frame = +3
Query: 72 DSKHSQ--APIEDLSELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAI 245
D KHS A +R + A + + S + ++ + DG +A G+ D + I
Sbjct: 75 DPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELTI 134
Query: 246 FNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTK 425
++ + + F V+++ W+ D +G +V + S K T+
Sbjct: 135 LDVRKFKPLHRRKFNYE---VNEIAWNMPG-DFFFLTTGLGTVEVLSYPSLKPLDTLTAH 190
Query: 426 GENIN-IAWSPNGNTIAVGNKEDLVSFIDTKTYKVV-TEEQFNFEVNEISWN 575
IA P G AVG+ + LVS D + T + + V IS+N
Sbjct: 191 TAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFN 242
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 71.7 bits (168), Expect = 4e-13
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +3
Query: 132 SHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVD 311
S + H V+ V +S DG+ +AS SFDKSV ++N + +F+GH G V
Sbjct: 349 SKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVT--VFRGHVGPVY 406
Query: 312 QLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKE 488
Q+ W A LLS S D +++IW+ R+ K +P + + + WSP+G + G K+
Sbjct: 407 QVSWSADSRLLLS-GSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKD 465
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V+ V WS D R L SGS D ++ I+ + +L QD GH V + W
Sbjct: 401 HVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQD--LPGHADEVFAVDWSPDGEK 458
Query: 342 LLSTASGDKSVRIW 383
++S D+ +++W
Sbjct: 459 VVS-GGKDRVLKLW 471
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+ V V +S DG++LASGS D +V +++L + F KGH V + W PD
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTE--TPLFTCKGHKNWVLTVAW---SPD 162
Query: 342 LLSTASGDKSVRI--WDTRSHKCAATIPTKGEN---INIAWSP 455
SG KS I W+ + + + P G I+W P
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGS-PLTGHKKWITGISWEP 204
Score = 36.7 bits (81), Expect = 0.014
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +3
Query: 240 AIFNLER-SRLSQDFIFKGHTGSVDQLCWHASHPD--LLSTASGDKSVRIWDTRSHKCAA 410
A+F + +R SQ GH +V LC S PD L++ SGD +VR+WD +
Sbjct: 91 AVFRIRPVNRCSQTIA--GHAEAV--LCVSFS-PDGKQLASGSGDTTVRLWDLYTETPLF 145
Query: 411 TIPT-KGENINIAWSPNGNTIAVGNK 485
T K + +AWSP+G + G+K
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSK 171
Score = 32.7 bits (71), Expect = 0.22
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +3
Query: 207 KLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWD 386
+L SGS D ++ ++ S+ + + GH V+ + + + +++AS DKSVR+W+
Sbjct: 331 RLVSGSDDFTMFLWEPSVSKQPKKRL-TGHQQLVNHV-YFSPDGKWIASASFDKSVRLWN 388
Query: 387 TRSHKCAATIPTK-GENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKV 527
+ + G ++WS + + G+K+ + + +T K+
Sbjct: 389 GITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKL 436
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 63.7 bits (148), Expect = 1e-10
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
+ + H +V+ V W G LAS S D + I+N+++S D + HT + + W
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDL--REHTKEIYTIRWS 499
Query: 327 ASHPDL--------LSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVG 479
+ P L++AS D +V++WD K + E + ++A+SPNG IA G
Sbjct: 500 PTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASG 559
Query: 480 NKEDLVSFIDTKTYKVVTEEQFNFEVNEISWN 575
+ + + K K+V N + E+ WN
Sbjct: 560 SLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWN 591
Score = 51.2 bits (117), Expect = 6e-07
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGR---------KLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQ 314
H+ +++++ WS G LAS SFD +V +++ E ++ F GH V
Sbjct: 489 HTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSF--NGHREPVYS 546
Query: 315 LCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDL 494
L + + + + +++ S DKS+ IW + K T G + W+ GN IA ++
Sbjct: 547 LAF-SPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIAACFADNS 605
Query: 495 VSFID 509
V +D
Sbjct: 606 VCVLD 610
Score = 39.9 bits (89), Expect = 0.001
Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 18/157 (11%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERS--------RLSQDFIFKGHTGS---- 305
H+S+V + WS LASGS D + I+++ R I K G
Sbjct: 264 HTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEK 323
Query: 306 ---VDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAV 476
V L W+ LL+T S D RIW + KG ++ W+ G+ +
Sbjct: 324 SKDVTTLDWNGEGT-LLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDYLLT 382
Query: 477 GNKEDLVSFIDTKTYKVVTEEQFNFEVN---EISWNN 578
G+ + D K + ++QF F ++ W N
Sbjct: 383 GSVDRTAVVWDVKAEE--WKQQFEFHSGPTLDVDWRN 417
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3
Query: 282 IFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN 440
I +GHT V W S LL++ SGD + RIW A G NIN
Sbjct: 260 ILEGHTSEVCACAWSPS-ASLLASGSGDATARIWSIPEGSFKAV--HTGRNIN 309
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS 332
Y H+ V+ + ++ DGR + SG D V +++L +L +F K H G + L +H
Sbjct: 232 YKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF--KSHEGKIQSLDFHP- 288
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWSPNGNTIAVGNKEDLVSF 503
H LL+T S DK+V+ WD + + + T+ + + ++P+G ++ G +E L F
Sbjct: 289 HEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKIF 346
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/135 (23%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Frame = +3
Query: 138 NTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQL 317
N HSS + SV + +A+G+ ++ +++LE +++ + GH + +
Sbjct: 143 NAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLT--GHRSNCVSV 200
Query: 318 CWHASHPDLLSTASGDKSVRIWDTRSHKCAATIP--TKGENINIAWSPNGNTIAVGNKED 491
+H + ++ S D +++IWD R C T T+G N+ + ++P+G I G +++
Sbjct: 201 NFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNV-LRFTPDGRWIVSGGEDN 258
Query: 492 LVSFIDTKTYKVVTE 536
+V D K++ E
Sbjct: 259 VVKVWDLTAGKLLHE 273
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/138 (22%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Frame = +3
Query: 111 ELRSYFASHNTTREYIAHSSKVH--SVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFI 284
+LR F+ ++ RE++AHS+ V+ +G R L +G D V ++ + +
Sbjct: 91 KLRILFSLISSFREFVAHSAAVNCLKIGRK-SSRVLVTGGEDHKVNLWAIGKPNAILSLY 149
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGEN-INIAWSPNG 461
GH+ +D + + AS L++ + ++++WD K T+ N +++ + P G
Sbjct: 150 --GHSSGIDSVTFDASE-GLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 206
Query: 462 NTIAVGNKEDLVSFIDTK 515
A G+ + + D +
Sbjct: 207 EFFASGSLDTNLKIWDIR 224
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 62.1 bits (144), Expect = 3e-10
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGR-KLASGSFDKSVAIFNL----ERSRLSQDFIFKGHTGSVDQLCWH 326
HSS+ + + WS + L SGS D + ++++ + L IFK H G V+ + WH
Sbjct: 177 HSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWH 236
Query: 327 ASHPDLLSTASGDKSVRIWDTRS---HKCAATIPTKGENIN-IAWSP-NGNTIAVGNKED 491
H L + D+ + IWD RS K ++ +N +A++P N +A G+ +
Sbjct: 237 LRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDK 296
Query: 492 LVSFIDTKTYKVV--TEEQFNFEVNEISWNNTFGLVLPHQWIGMR-TYYDLS 638
V D + T + EV ++ WN +L +G R +DLS
Sbjct: 297 TVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
Score = 31.1 bits (67), Expect = 0.68
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)
Frame = +3
Query: 159 AHSSKVHSVGWS----------CDGRKLAS---GSFDKSVAIFNLERSRLSQDFIFKGHT 299
+H +V VGW+ C GR+L D+ + + E FI GHT
Sbjct: 315 SHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHT 374
Query: 300 GSVDQLCWHASHPDLLSTASGDKSVRIW 383
+ W+ ++S+ + D ++IW
Sbjct: 375 SKISDFSWNPCEDWVISSVAEDNILQIW 402
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = +3
Query: 156 IAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFK--GHTGSVDQLCWHA 329
+ H S+V + WS D R+LASG D + ++N SQ I K HT +V + W
Sbjct: 295 VGHKSEVCGLKWSHDDRELASGGNDNQLLVWN----NHSQQPILKLTEHTAAVKAITWSP 350
Query: 330 SHPDLLSTASG--DKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTI 470
LL++ G D+ +R W+T + +I T + N+AWS N N I
Sbjct: 351 HQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNLAWSKNVNEI 399
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS 332
Y H+ V +S G AS S D++ I++++R + + I GH VD WH +
Sbjct: 456 YKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLR--IMAGHLSDVD---WHPN 510
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAAT-IPTKGENINIAWSPNGNTIAVGNKEDLVSFID 509
+ ++T S DK+VR+WD ++ +C I + +++A SP+G +A G+++ + D
Sbjct: 511 C-NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWD 569
Query: 510 TKTYKVVT 533
T + +T
Sbjct: 570 LSTARCIT 577
Score = 48.4 bits (110), Expect = 4e-06
Identities = 31/98 (31%), Positives = 48/98 (48%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
R +I H S V S+ S DGR +ASG D ++ +++L +R + GH V L +
Sbjct: 535 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM--GHNSCVWSLS-Y 591
Query: 327 ASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN 440
+ LL++ S D +V++WD S K N N
Sbjct: 592 SGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSN 629
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H S+V + WS D R+LASG D + ++N ++ + HT +V + W
Sbjct: 334 HKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQ--PVLKYSEHTAAVKAIAWSPHVHG 391
Query: 342 LLSTASG--DKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTI 470
LL++ G D+ +R W+T ++ ++I T + N+AWS N N +
Sbjct: 392 LLASGGGTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNEL 436
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIF--NLERSRLSQDFI--FKGHTGSVDQLC 320
Y+ H+ +V + WS G+KLASG D V I+ +L S ++ ++ F+ HT +V L
Sbjct: 232 YVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALA 291
Query: 321 WHASHPDLLSTAS--GDKSVRIWDTRSHKCAATIPTKGENINIAWS 452
W LL+T GD + W+T + C ++ T + ++ WS
Sbjct: 292 WCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWS 337
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H S++ + WS D R+LASG D + ++N ++ F H +V + W H
Sbjct: 291 HKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQ--PVLRFCEHAAAVKAIAWSPHHFG 348
Query: 342 LLSTASG--DKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTI 470
LL++ G D+ +R W+T ++ + T + N+ WS N N +
Sbjct: 349 LLASGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNEL 393
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/89 (35%), Positives = 52/89 (58%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
R + AHS V S+ +S DG +L S SFD++ I L+ +L ++ F+GHT V+ +
Sbjct: 299 RRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKE--FRGHTSYVNHAIF- 355
Query: 327 ASHPDLLSTASGDKSVRIWDTRSHKCAAT 413
S + TAS D +V++WD+++ C T
Sbjct: 356 TSDGSRIITASSDCTVKVWDSKTTDCLQT 384
Score = 33.5 bits (73), Expect = 0.13
Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +3
Query: 138 NTTREYIAHSSKVHS--VGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSV- 308
N I K H+ +S DG+ LAS S D + +++ +L +D ++ +
Sbjct: 202 NVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMM 261
Query: 309 ---DQLCWHASH-PDLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIA 473
LC S ++L++ S D ++IW R+ C + + ++++S +G+ +
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 474 VGNKEDLVSFIDTKTYKVVTE 536
+ + K+ K++ E
Sbjct: 322 STSFDQTARIHGLKSGKLLKE 342
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 58.8 bits (136), Expect = 3e-09
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Frame = +3
Query: 138 NTTREYIAHSSKVHSVGWSCDGR-KLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQ 314
N R + H+ +V SV ++ R + S+D +V ++ ++R + F K H V Q
Sbjct: 97 NPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTF--KEHAYCVYQ 154
Query: 315 LCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKG-ENINIAWSPNGNTI-AVGNKE 488
W+ H D+ ++ASGD ++RIWD R IP E ++ W+ + I A + +
Sbjct: 155 AVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVD 214
Query: 489 DLVSFIDTKTYKV 527
V D ++Y+V
Sbjct: 215 KTVKVWDVRSYRV 227
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 159 AHSSKVHSVGWS-CDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASH 335
AH ++ S W+ D LA+ S DK+V ++++ R+ + GH +V ++ +
Sbjct: 190 AHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLA-VLNGHGYAVRKVKFSPHR 248
Query: 336 PDLLSTASGDKSVRIWD 386
L+++ S D SV +WD
Sbjct: 249 RSLIASCSYDMSVCLWD 265
Score = 33.9 bits (74), Expect = 0.096
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 303 SVDQLCWHASHPDLLSTASGDKSVRIWDT 389
+V +CW SH +L A GD SV+I+DT
Sbjct: 62 AVYDVCWSESHDSVLIAAIGDGSVKIYDT 90
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H + V SV W+ +G L + S D+ + ++++ + Q F +GHT V L WH H +
Sbjct: 309 HKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSF--RGHTKDVTSLAWHPCHEE 366
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENI--NIAWSPNGNTIAVGNKEDLVSF 503
+ S D S+ W IP +N ++AW P G + G+ + F
Sbjct: 367 YFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKF 422
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPT-KGENINIAWSPNGNT 467
GH V + WH + LL + D+ V++WDTRS + ++ K +++ W+ NGN
Sbjct: 266 GHGWDVKSVDWHPTK-SLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Query: 468 IAVGNKEDLVSFIDTKTYKVVTE-EQFNFEVNEISWN 575
+ +K+ ++ D +T K + +V ++W+
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWH 361
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H++ + + +S +LA+ SFDK+V +++ + S F GH+ V L +H D
Sbjct: 692 HTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLR-TFMGHSSMVTSLDFHPIKDD 750
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTY 521
L+ + D +R W + C T KG + I + P + +LV+ +D +T
Sbjct: 751 LICSCDNDNEIRYWSINNGSC--TRVYKGGSTQIRFQPRVGKYLAASSANLVNVLDVETQ 808
Query: 522 KVVTEEQFNFE-VNEISWN 575
+ Q + +N + W+
Sbjct: 809 AIRHSLQGHANPINSVCWD 827
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHP 338
A ++KV +S DG+ LAS DK ++ + + + HT + + + S
Sbjct: 649 ASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTD--TMKPKTTLEEHTAMITDIRFSPSQL 706
Query: 339 DLLSTASGDKSVRIWD 386
L+T+S DK+VR+WD
Sbjct: 707 -RLATSSFDKTVRVWD 721
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLC-WHASHP 338
H++ ++SV W G LAS S D V ++ L + G+ Q C +H ++P
Sbjct: 817 HANPINSVCWDPSGDFLASVSED-MVKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYP 875
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
LL +S+ +W+ +K +G ++A S +A + + LV
Sbjct: 876 SLL-VIGCYQSLELWNMSENKTMTLPAHEGLITSLAVSTATGLVASASHDKLV 927
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +3
Query: 201 GRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRI 380
G+ LA+ S + V + ++E + +GH ++ +CW S D L++ S D V++
Sbjct: 789 GKYLAASSANL-VNVLDVETQAIRHSL--QGHANPINSVCWDPS-GDFLASVSED-MVKV 843
Query: 381 W 383
W
Sbjct: 844 W 844
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIF---NLERSRLSQDFI--FKGHTGSVDQL 317
Y+ H+ +V + WS G+KLASG D V I+ ++ S ++ ++ F+ HT +V L
Sbjct: 214 YLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRAL 273
Query: 318 CWHASHPDLLSTAS--GDKSVRIWDTRSHKCAATIPTKGENINIAWS 452
W LL+T GD ++ W+T + C ++ T + ++ WS
Sbjct: 274 AWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWS 320
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIF--NLERSRLSQDFI--FKGHTGSVDQLC 320
Y+ H+ +V + WS G K ASG D V I+ +L S+ ++ ++ F+ HT +V L
Sbjct: 248 YLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALA 307
Query: 321 WHASHPDLLSTAS--GDKSVRIWDTRSHKCAATIPTKGENINIAWS 452
W LL+T GD ++ W+T + C ++ T + ++ WS
Sbjct: 308 WCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWS 353
Score = 36.3 bits (80), Expect = 0.018
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Frame = +3
Query: 129 ASHNTTREYIA---HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHT 299
AS +T E + V S+ W+ DG LA G + V +++ +R + + GH
Sbjct: 153 ASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRT-LRGGHE 211
Query: 300 GSVDQLCWHASHPDLLSTASGDKSVRIWDTR--SHKCAATIPTKGENINIAWSPNGNTIA 473
V L W +H +L+T D + D R S + E + WS +GN A
Sbjct: 212 SRVGSLAWD-NH--ILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGNKQA 268
Query: 474 VGNKEDLVSFID 509
G +++V D
Sbjct: 269 SGGNDNVVHIWD 280
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFN--LERSRLSQDFIFK--GHTGSVDQLC 320
Y H+ +V + WS G++LASG D V I++ + S + ++ + HT +V L
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 321
Query: 321 WHASHPDLLSTASG--DKSVRIWDTRSHKCAATIPTKGENINIAWSPN 458
W +LL+T G D++++ W+T + C ++ T + ++ WS N
Sbjct: 322 WCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKN 369
Score = 35.9 bits (79), Expect = 0.024
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Frame = +3
Query: 129 ASHNTTREYIA---HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHT 299
AS +T E + V S+ W+ DGR +A G + V +++ +R + + GH
Sbjct: 167 ASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRT-LKGGHQ 225
Query: 300 GSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHK-CAATIPTKGENI-NIAWSPNGNTIA 473
V L W+ +H +L+T D + D R T + + + WS +G +A
Sbjct: 226 SRVGSLAWN-NH--ILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLA 282
Query: 474 VGNKEDLVSFID 509
G +++V D
Sbjct: 283 SGGNDNVVHIWD 294
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 363 DKSVRIWD--TRSHKCAATIPT-KGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVT 533
D +V +WD T S TI KG +I W+P+G +AVG V D+ + + +
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 534 EEQFNFE--VNEISWNN 578
+ + V ++WNN
Sbjct: 219 TLKGGHQSRVGSLAWNN 235
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFN--LERSRLSQDFIFK--GHTGSVDQLC 320
Y H+ +V + WS G++LASG D V I++ + S + ++ + HT +V L
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 311
Query: 321 WHASHPDLLSTASG--DKSVRIWDTRSHKCAATIPTKGENINIAWSPN 458
W +LL+T G D++++ W+T + C ++ T + ++ WS N
Sbjct: 312 WCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKN 359
Score = 35.9 bits (79), Expect = 0.024
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Frame = +3
Query: 129 ASHNTTREYIA---HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHT 299
AS +T E + V S+ W+ DGR +A G + V +++ +R + + GH
Sbjct: 157 ASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRT-LKGGHQ 215
Query: 300 GSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHK-CAATIPTKGENI-NIAWSPNGNTIA 473
V L W+ +H +L+T D + D R T + + + WS +G +A
Sbjct: 216 SRVGSLAWN-NH--ILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLA 272
Query: 474 VGNKEDLVSFID 509
G +++V D
Sbjct: 273 SGGNDNVVHIWD 284
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +3
Query: 363 DKSVRIWD--TRSHKCAATIPT-KGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVT 533
D +V +WD T S TI KG +I W+P+G +AVG V D+ + + +
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 534 EEQFNFE--VNEISWNN 578
+ + V ++WNN
Sbjct: 209 TLKGGHQSRVGSLAWNN 225
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H++ + V +S DG LAS S DK++ +++ L ++GH+ + L W +S
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHR--YEGHSSGISDLAW-SSDSH 98
Query: 342 LLSTASGDKSVRIWDTRS-HKCAATIPTKGENI-NIAWSPNGNTIAVGNKEDLVSFIDTK 515
+AS D ++RIWD RS ++C + + + ++P N I G+ ++ + + K
Sbjct: 99 YTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK 158
Query: 516 TYKVVTE-EQFNFEVNEISWNNTFGLVL 596
T K V + + ++ + +N L++
Sbjct: 159 TGKCVRMIKAHSMPISSVHFNRDGSLIV 186
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +3
Query: 132 SHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVD 311
+++ Y HSS + + WS D S S D ++ I++ RS + +GHT V
Sbjct: 74 NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDA-RSPYECLKVLRGHTNFV- 131
Query: 312 QLCWHASHP-DLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNK 485
C + + P +L+ + S D+++RIW+ ++ KC I I ++ ++ +G+ I +
Sbjct: 132 -FCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASH 190
Query: 486 EDLVSFIDTK 515
+ D K
Sbjct: 191 DGSCKIWDAK 200
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS 332
Y HS + ++ ++ DGR + SG D V +++L +L +F F H G + L +H
Sbjct: 138 YKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKF--HEGPIRSLDFHPL 195
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKEDL 494
LL+T S D++V+ WD + + + + + +I + P+G T+ G + L
Sbjct: 196 E-FLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCGLDDSL 249
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 56.0 bits (129), Expect = 2e-08
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+ V S WS G+ LA+ SFD + I+ S +GH V + W+AS
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNAS-GS 131
Query: 342 LLSTASGDKSVRIWDT---RSHKCAATIPTKGENIN-IAWSP 455
L+T S DKSV IW+ + CAA + +++ + W P
Sbjct: 132 CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP 173
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFN-LERSRLSQDFIFKGHTGSVDQLCWHASHP 338
H ++V SV W+ G LA+ S DKSV I+ LE + + GHT V + WH +
Sbjct: 117 HENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPT-M 175
Query: 339 DLLSTASGDKSVRIW----DTRSHKCAATI-PTKGENINIAWSPNGNTIAVGNKEDLVSF 503
D+L + S D ++++W D ++C T+ + + + WS + N A G+K +V+
Sbjct: 176 DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFN--AAGDK--MVTC 231
Query: 504 IDTKTYKV 527
D T K+
Sbjct: 232 SDDLTLKI 239
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Frame = +3
Query: 288 KGHTGSVDQLCWH--ASHPD----LLSTASGDKSVRIWD----TRSHKCAATI-PTKGEN 434
+GHT V + W+ +SH D +L++ SGD +VRIW+ +RS C + T
Sbjct: 17 EGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRT 76
Query: 435 I-NIAWSPNGNTIAVGNKEDLVSF---IDTKTYKVVTEEQFNFEVNEISWN 575
+ + AWSP+G +A + + ++ + T E EV +SWN
Sbjct: 77 VRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWN 127
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 56.0 bits (129), Expect = 2e-08
Identities = 43/160 (26%), Positives = 84/160 (52%), Gaps = 5/160 (3%)
Frame = +3
Query: 111 ELRSY-FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFN-LERSRLSQDFI 284
ELR + A+ +TR ++ H+ V SV +S D R++ S S D+++ ++N L + +
Sbjct: 86 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEG 145
Query: 285 FKGHTGSVDQLCWHAS--HPDLLSTASGDKSVRIWDTRSHKCAATIP-TKGENINIAWSP 455
+GH V + + + P ++S AS DK+V++W+ + K +T+ G +A SP
Sbjct: 146 GEGHRDWVSCVRFSPNTLQPTIVS-ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 204
Query: 456 NGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNFEVNEISWN 575
+G+ A G K+ +V D K + + N ++ + ++
Sbjct: 205 DGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFS 244
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/95 (30%), Positives = 50/95 (52%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
R HS V V S DG+ SGS+D + +++L ++ F+ GHT V + +
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV--GHTKDVLSVAFS 114
Query: 327 ASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGE 431
+ ++S AS D+++++W+T +C TI GE
Sbjct: 115 LDNRQIVS-ASRDRTIKLWNTLG-ECKYTISEGGE 147
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/82 (30%), Positives = 47/82 (57%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
R++IAH + + + W L + S D+++ ++++E ++ + I GHTG+V +C H
Sbjct: 122 RDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLI--GHTGTVKSMCSH 179
Query: 327 ASHPDLLSTASGDKSVRIWDTR 392
++ DLL + S D +WD R
Sbjct: 180 PTNSDLLVSGSRDGCFALWDLR 201
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +3
Query: 192 SCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKS 371
S DG + SGS D + I+ + + ++ I KGH V + W S ++TAS D +
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDP-IILKGHDFEVTAVDWSPSEIGKVATASDDFT 405
Query: 372 VRIWDTRSHKC 404
VR+W+ ++ C
Sbjct: 406 VRLWNIENNIC 416
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +3
Query: 249 NLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAAT-IPTK 425
N E++R +D+I H ++ + W LL TASGD+++++WD +KC I
Sbjct: 115 NTEKARF-RDWI--AHYNAIFDISWIKGDSCLL-TASGDQTIKVWDVEENKCTGVLIGHT 170
Query: 426 GENINIAWSP-NGNTIAVGNKEDLVSFIDTKTYKVVTEEQF 545
G ++ P N + + G+++ + D + +E+F
Sbjct: 171 GTVKSMCSHPTNSDLLVSGSRDGCFALWDLRCKSSSHKEEF 211
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 55.2 bits (127), Expect = 4e-08
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+S V SV ++ + + +G+ + +++LE S++ + F GH + + +H +
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVR--AFTGHRSNCSAVEFHP-FGE 62
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWSPNGNTIAVGNKEDLVSFIDTKT 518
L++ S D ++R+WDTR C T I+ I +SP+G + G +++V D
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Query: 519 YKVVTE 536
K++ E
Sbjct: 123 GKLLHE 128
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 54.4 bits (125), Expect = 6e-08
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIF---NLERSRLSQDFI--FKGHTGSVDQL 317
Y+ H+ +V + WS G+KLASG V I+ ++ S+ ++ ++ F+ HT +V L
Sbjct: 245 YLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRAL 304
Query: 318 CWHASHPDLLSTAS--GDKSVRIWDTRSHKCAATIPTKGENINIAWS 452
W LL+T GD ++ W+T + C ++ T + ++ WS
Sbjct: 305 AWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWS 351
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Frame = +3
Query: 156 IAHSSKVHSVGWS-CDGRKLASGSFDKSVAIFNLERSR----LSQDFIFKGHTGSVDQLC 320
+ H + + + WS L SGS D+ + ++++ + L+ F+++GH ++ +
Sbjct: 165 VGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVS 224
Query: 321 WHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWSP-NGNTIAVGNKEDL 494
WH + +L +A D + IWDTR+++ + +N ++++P N +A + +
Sbjct: 225 WHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDST 284
Query: 495 VSFIDTKTYKVVTE--EQFNFEVNEISWNNTFGLVL 596
V+ D + EV ++ W+ VL
Sbjct: 285 VALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVL 320
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKL-ASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHA 329
Y H S + V W L S D + I++ +++ K H V+ L ++
Sbjct: 213 YEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQV--KVHEREVNYLSFNP 270
Query: 330 SHPDLLSTASGDKSVRIWDTRSHKCAATIPT--KGENINIAWSPNGNTIAVGNKED 491
+ +L+TAS D +V ++D R + + +GE + W PN T+ + ED
Sbjct: 271 FNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGED 326
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWD 386
LA+ S D +VA+F+L + + H G V Q+ W +H +L+++ D+ + +WD
Sbjct: 276 LATASSDSTVALFDLRKLNAPLH-VMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 333
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRK-LASGSFDKSVAIFNLERSRLSQ------------DFIFK--G 293
+H +V V W + LAS D+ + +++L R Q + +F G
Sbjct: 302 SHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGG 361
Query: 294 HTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
H + W+ + P ++++ + D S+++W
Sbjct: 362 HKAKISDFAWNKNEPWVIASVAEDNSLQVW 391
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 53.2 bits (122), Expect = 1e-07
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
Frame = +3
Query: 126 FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIF--NLERSRLSQDF-IFKGH 296
F + ++ +H+ V SV +S DGR LAS S DK++ + N +++ F GH
Sbjct: 11 FTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGH 70
Query: 297 TGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAAT-IPTKGENINIAWSPNGNTIA 473
+ + + +S + +AS DK++++WD + T I + ++P N I
Sbjct: 71 ENGISDVAF-SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIV 129
Query: 474 VGNKEDLVSFIDTKTYKVVTEEQFNFE-VNEISWNNTFGLVLPHQWIGMRTYYD 632
G+ ++ V D T K + + + V + +N L++ + G+ +D
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +3
Query: 198 DGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVR 377
+G+++ SGS D V ++ L +L Q +GHT +V + H + +L+++ S DK+VR
Sbjct: 254 NGKRIVSGSEDNCVHMWELNSKKLLQKL--EGHTETVMNVACHPTE-NLIASGSLDKTVR 310
Query: 378 IW 383
IW
Sbjct: 311 IW 312
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 53.2 bits (122), Expect = 1e-07
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Frame = +3
Query: 105 LSELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFI 284
L +LRSY H R +++H+ V +VG+ G + SGS D SV I++L ++F
Sbjct: 65 LFDLRSY-NPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREF- 122
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDK--SVRIWDTRSHKCAA-TIPTKG---ENINIA 446
SV + HP+ SGD+ ++R+WD R+ C+ +P G ++ +
Sbjct: 123 -----RSVSPVNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVM 177
Query: 447 WSPNGNTIAVGN 482
W +G + N
Sbjct: 178 W--DGTMVVAAN 187
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/81 (33%), Positives = 42/81 (51%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHP 338
AH+S + S + LA+ S DK+V I+NL+ +L + + GH V C +
Sbjct: 215 AHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEK--VLTGHERWVWD-CDFSMDG 271
Query: 339 DLLSTASGDKSVRIWDTRSHK 401
+ L TAS D + R+W R+ K
Sbjct: 272 EYLVTASSDTTARLWSMRAGK 292
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 336 PDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWSP-NGNTIAVGNKEDLVSFID 509
P L+TAS D+++R+W R+ +C + ++N + +P G +A N + D
Sbjct: 10 PVYLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPH--IRLFD 67
Query: 510 TKTY 521
++Y
Sbjct: 68 LRSY 71
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 285 FKGHTGSVDQLCW-HASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNG 461
F HT +V + + + H ++ + S D SV+IWD R +C + + PN
Sbjct: 80 FVSHTKNVMAVGFQYTGH--MMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTVVLHPNQ 137
Query: 462 NTIAVGNKEDLVSFIDTK 515
+ G++ + D +
Sbjct: 138 TELISGDQNGNIRVWDLR 155
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V + +S D + L +G F+K + +F++ R + K GS+ L W S
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKS-PGSIRTLTWLHSDQT 159
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTY 521
+LS+ + VR+WD RS K T+ TK + S +G I + V F D +
Sbjct: 160 ILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHF 218
Query: 522 KVV 530
+V
Sbjct: 219 GLV 221
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V + +S D + L +G F+K + +F++ R + K GS+ L W S
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKS-PGSIRTLTWLHSDQT 159
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTY 521
+LS+ + VR+WD RS K T+ TK + S +G I + V F D +
Sbjct: 160 ILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHF 218
Query: 522 KVV 530
+V
Sbjct: 219 GLV 221
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/77 (32%), Positives = 46/77 (59%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
+S + SV +S DGR++ +GS D S+ +++LE +R+S + HT V+ +C+ +
Sbjct: 228 YSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTV--AHTSDVNTVCFADESGN 285
Query: 342 LLSTASGDKSVRIWDTR 392
L+ + S D ++WD R
Sbjct: 286 LILSGSDDNLCKVWDRR 302
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/123 (29%), Positives = 55/123 (44%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V + +S D + L +G F+K + +F+L R I K GS+ L W
Sbjct: 101 HKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKS-PGSIRTLTWLHGDQT 159
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTY 521
+LS+ + VR+WD RS K T+ TK + S +G I + V F D +
Sbjct: 160 ILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHF 218
Query: 522 KVV 530
+V
Sbjct: 219 GLV 221
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 52.0 bits (119), Expect = 3e-07
Identities = 32/135 (23%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Frame = +3
Query: 138 NTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQL 317
N HSS + SV + +A+G+ ++ +++LE +++ + GH + +
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT--GHRSNCISV 107
Query: 318 CWHASHPDLLSTASGDKSVRIWDTRSHKCAATIP--TKGENINIAWSPNGNTIAVGNKED 491
+H + ++ S D +++IWD R C T T+G N+ + ++P+G + G +++
Sbjct: 108 DFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNV-LRFTPDGRWVVSGGEDN 165
Query: 492 LVSFIDTKTYKVVTE 536
+V D K++TE
Sbjct: 166 IVKVWDLTAGKLLTE 180
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 52.0 bits (119), Expect = 3e-07
Identities = 32/135 (23%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Frame = +3
Query: 138 NTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQL 317
N HSS + SV + +A+G+ ++ +++LE +++ + GH + +
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT--GHRSNCISV 107
Query: 318 CWHASHPDLLSTASGDKSVRIWDTRSHKCAATIP--TKGENINIAWSPNGNTIAVGNKED 491
+H + ++ S D +++IWD R C T T+G N+ + ++P+G + G +++
Sbjct: 108 DFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNV-LRFTPDGRWVVSGGEDN 165
Query: 492 LVSFIDTKTYKVVTE 536
+V D K++TE
Sbjct: 166 IVKVWDLTAGKLLTE 180
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/118 (23%), Positives = 55/118 (46%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H + + + W+ DG ++ S S DK+V +++E + + H+ V+ C P
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMA--EHSSFVNSCCPTRRGPP 152
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTK 515
L+ + S D + ++WD R T P K + +++S + I G ++ V D +
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 189 WSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDK 368
WS DG K+ +GS D+ V I++ R + GHTGSV++ +H + P ++ + S DK
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTI--YKLPGHTGSVNECVFHPTEP-IIGSCSSDK 336
Query: 369 SV 374
++
Sbjct: 337 NI 338
Score = 37.1 bits (82), Expect = 0.010
Identities = 25/129 (19%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Frame = +3
Query: 171 KVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLS 350
++ +V +S K+ +G D V +++L + + +GH ++ + LL+
Sbjct: 182 QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL--EGHQDTITGMSLSPDGSYLLT 239
Query: 351 TASGDKSVRIWDTRSH----KCAATIPTKGEN-----INIAWSPNGNTIAVGNKEDLVSF 503
D + +WD R + +C N + +WSP+G + G+ + +V
Sbjct: 240 NGM-DNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHI 298
Query: 504 IDTKTYKVV 530
DT + + +
Sbjct: 299 WDTTSRRTI 307
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/112 (29%), Positives = 56/112 (50%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
HSS VHSV WS +G +AS S D +V +++L + G+ + +H S+PD
Sbjct: 674 HSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGN--KFHSVVFHPSYPD 730
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
LL G +++ +W+T +KC + +A SP+ +A + + V
Sbjct: 731 LL-VIGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 781
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+ + V + + +LA+ SFDK++ I++ I GH V + +H +
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSIDFHPKKTE 607
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSF--IDTK 515
LL + + +R WD + C + KG + + + P E+ VS I+
Sbjct: 608 LLCSCDSNNDIRFWDINA-SCVRAV--KGASTQVRFQPRTGQFLAAASENTVSIFDIENN 664
Query: 516 TYKVVTEEQFNFEVNEISWNNTFGLV 593
+V + + V+ + W+ LV
Sbjct: 665 NKRVNIFKGHSSNVHSVCWSPNGELV 690
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDL 344
+SKV +S DG+ LAS DK V I+N+E L + + H + + + +
Sbjct: 508 ASKVICCSFSYDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRFRPNSTQ- 564
Query: 345 LSTASGDKSVRIWD 386
L+T+S DK+++IWD
Sbjct: 565 LATSSFDKTIKIWD 578
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/112 (29%), Positives = 56/112 (50%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
HSS VHSV WS +G +AS S D +V +++L + G+ + +H S+PD
Sbjct: 676 HSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGN--KFHSVVFHPSYPD 732
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
LL G +++ +W+T +KC + +A SP+ +A + + V
Sbjct: 733 LL-VIGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 783
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+ + V + + +LA+ SFDK++ I++ I GH V + +H +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSIDFHPKKTE 609
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSF--IDTK 515
LL + + +R WD + C + KG + + + P E+ VS I+
Sbjct: 610 LLCSCDSNNDIRFWDINA-SCVRAV--KGASTQVRFQPRTGQFLAAASENTVSIFDIENN 666
Query: 516 TYKVVTEEQFNFEVNEISWNNTFGLV 593
+V + + V+ + W+ LV
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELV 692
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDL 344
+SKV +S DG+ LAS DK V I+N+E L + + H + + + +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRFRPNSTQ- 566
Query: 345 LSTASGDKSVRIWD 386
L+T+S DK+++IWD
Sbjct: 567 LATSSFDKTIKIWD 580
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/112 (29%), Positives = 56/112 (50%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
HSS VHSV WS +G +AS S D +V +++L + G+ + +H S+PD
Sbjct: 676 HSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGN--KFHSVVFHPSYPD 732
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
LL G +++ +W+T +KC + +A SP+ +A + + V
Sbjct: 733 LL-VIGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 783
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+ + V + + +LA+ SFDK++ I++ I GH V + +H +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSIDFHPKKTE 609
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSF--IDTK 515
LL + + +R WD + C + KG + + + P E+ VS I+
Sbjct: 610 LLCSCDSNNDIRFWDINA-SCVRAV--KGASTQVRFQPRTGQFLAAASENTVSIFDIENN 666
Query: 516 TYKVVTEEQFNFEVNEISWNNTFGLV 593
+V + + V+ + W+ LV
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELV 692
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDL 344
+SKV +S DG+ LAS DK V I+N+E L + + H + + + +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRFRPNSTQ- 566
Query: 345 LSTASGDKSVRIWD 386
L+T+S DK+++IWD
Sbjct: 567 LATSSFDKTIKIWD 580
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/112 (29%), Positives = 56/112 (50%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
HSS VHSV WS +G +AS S D +V +++L + G+ + +H S+PD
Sbjct: 676 HSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGN--KFHSVVFHPSYPD 732
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
LL G +++ +W+T +KC + +A SP+ +A + + V
Sbjct: 733 LL-VIGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 783
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+ + V + + +LA+ SFDK++ I++ I GH V + +H +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSIDFHPKKTE 609
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSF--IDTK 515
LL + + +R WD + C + KG + + + P E+ VS I+
Sbjct: 610 LLCSCDSNNDIRFWDINA-SCVRAV--KGASTQVRFQPRTGQFLAAASENTVSIFDIENN 666
Query: 516 TYKVVTEEQFNFEVNEISWNNTFGLV 593
+V + + V+ + W+ LV
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELV 692
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDL 344
+SKV +S DG+ LAS DK V I+N+E L + + H + + + +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRFRPNSTQ- 566
Query: 345 LSTASGDKSVRIWD 386
L+T+S DK+++IWD
Sbjct: 567 LATSSFDKTIKIWD 580
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/112 (29%), Positives = 56/112 (50%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
HSS VHSV WS +G +AS S D +V +++L + G+ + +H S+PD
Sbjct: 676 HSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGN--KFHSVVFHPSYPD 732
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
LL G +++ +W+T +KC + +A SP+ +A + + V
Sbjct: 733 LL-VIGGYQAIELWNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 783
Score = 44.0 bits (99), Expect = 9e-05
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+ + V + + +LA+ SFDK++ I++ I GH V + +H +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSIDFHPKKTE 609
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSF--IDTK 515
LL + + +R WD + C + KG + + + P E+ VS I+
Sbjct: 610 LLCSCDSNNDIRFWDINA-SCVRAV--KGASTQVRFQPRTGQFLAAASENTVSIFDIENN 666
Query: 516 TYKVVTEEQFNFEVNEISWNNTFGLV 593
+V + + V+ + W+ LV
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELV 692
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDL 344
+SKV +S DG+ LAS DK V I+N+E L + + H + + + +
Sbjct: 510 ASKVICCSFSYDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRFRPNSTQ- 566
Query: 345 LSTASGDKSVRIWD 386
L+T+S DK+++IWD
Sbjct: 567 LATSSFDKTIKIWD 580
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/156 (20%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Frame = +3
Query: 156 IAHSSKVHSVGWSCDGRK-LASGSFDKSVAIFNLERSR----LSQDFIFKGHTGSVDQLC 320
+ H + + + WS L SGS D+ + ++++ + L+ +++GH ++ +
Sbjct: 166 MGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVA 225
Query: 321 WHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWSP-NGNTIAVGNKEDL 494
WH + ++ +A D + IWD R+++ + IN ++++P N +A + +
Sbjct: 226 WHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDST 285
Query: 495 VSFIDTK--TYKVVTEEQFNFEVNEISWNNTFGLVL 596
V+ D + T + + EV ++ W+ VL
Sbjct: 286 VALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVL 321
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Frame = +3
Query: 138 NTTREYIAHSSKVHSVGWSCDGRKL-ASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQ 314
N Y H S + V W + S D + I++L +++ K H ++
Sbjct: 209 NPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQV--KVHEREINY 266
Query: 315 LCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTK--GENINIAWSPNGNTIAVGNKE 488
L ++ + +L+TAS D +V ++D R + +K GE + W PN T+ + E
Sbjct: 267 LSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGE 326
Query: 489 D 491
D
Sbjct: 327 D 327
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWD 386
LA+ S D +VA+F+L + + K H G V Q+ W +H +L+++ D+ + +WD
Sbjct: 277 LATASSDSTVALFDLRKLTAPLHVLSK-HEGEVFQVEWDPNHETVLASSGEDRRLMVWD 334
Score = 29.9 bits (64), Expect = 1.6
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +3
Query: 279 FIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
F GH + W+ P ++S+ + D S+++W
Sbjct: 358 FSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVW 392
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 49.6 bits (113), Expect = 2e-06
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Frame = +3
Query: 183 VGWSCDGRKLASGSFDKSVAI--FNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTA 356
V WS K A GS K+V I + E + I K H SV + WH ++ LL+T
Sbjct: 105 VQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNV-LLATT 163
Query: 357 SGDKSVRIW-------DTRSHKCAATIPTK-GENI-----------NIAWSPNGNTIAVG 479
S D R++ DT+ K + TK GE I + WSP+GNT+A
Sbjct: 164 STDGKCRVFSTFIKGVDTKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYV 223
Query: 480 NKEDLVSFID 509
++ F+D
Sbjct: 224 GHSSMIYFVD 233
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 49.6 bits (113), Expect = 2e-06
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Frame = +3
Query: 183 VGWSCDGRKLASGSFDKSVAI--FNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTA 356
V WS K A GS K+V I + E + I K H SV + WH ++ LL+T
Sbjct: 105 VQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNV-LLATT 163
Query: 357 SGDKSVRIW-------DTRSHKCAATIPTK-GENI-----------NIAWSPNGNTIAVG 479
S D R++ DT+ K + TK GE I + WSP+GNT+A
Sbjct: 164 STDGKCRVFSTFIKGVDTKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYV 223
Query: 480 NKEDLVSFID 509
++ F+D
Sbjct: 224 GHSSMIYFVD 233
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/120 (27%), Positives = 53/120 (44%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V + +S D +L +G +K + IF+L R + GS+ + W S
Sbjct: 96 HKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRPDAPPKEVGNS-PGSIRTVEWLHSDNT 154
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTY 521
+LS+ + +R+WD RS K T+ TK + S +G I + V F D K +
Sbjct: 155 ILSSCTDTGDIRLWDIRSDKIVHTLETKSPVTSAEVSQDGRYITTADGSS-VKFWDAKNF 213
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/62 (35%), Positives = 41/62 (66%)
Frame = +3
Query: 198 DGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVR 377
D +ASGS D V I+NL+ ++ + + GH+ +V+ + W+ +P +L++AS D+++R
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLE--VLSGHSMTVNCVSWNPKNPRMLASASDDQTIR 511
Query: 378 IW 383
IW
Sbjct: 512 IW 513
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/133 (24%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTG-SVDQLCWHASH 335
+H + V V WS D KL + + + +++++ L F +TG +V W
Sbjct: 267 SHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTF-GNNNTGFTVSSCAWFPDS 325
Query: 336 PDLLSTASG-DKSVRIWDTRSHKCAATIPTK-GENINIAWSPNGNTIAV--GNKEDLVSF 503
L+ +S ++ + +WDT ++ A T+ + +++A +P+G ++ +KE +
Sbjct: 326 TRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILN 385
Query: 504 IDTKTYKVVTEEQ 542
++TK +V++EEQ
Sbjct: 386 LETKVERVISEEQ 398
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 48.8 bits (111), Expect = 3e-06
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 6/182 (3%)
Frame = +3
Query: 51 MITKAMKDSKHSQAPIEDLSELR-SYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSF 227
++ + +D I + +L+ +Y H T R H H C R S
Sbjct: 38 LLVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTH----HPSSLICSSRYNLE-ST 92
Query: 228 DKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCA 407
+S+ ++ +R+ + FKGH V LC + +S S D+SVR+WD R + C
Sbjct: 93 GESLRYLSMYDNRILR--YFKGHKDRVVSLCMSPINDSFMS-GSLDRSVRLWDLRVNACQ 149
Query: 408 ATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTEEQF-----NFEVNEISW 572
+ +G +A+ G A+ + V D++ Y + F EVN+I +
Sbjct: 150 GILHLRGRPA-VAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKF 208
Query: 573 NN 578
+N
Sbjct: 209 SN 210
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 171 KVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLS 350
K+HSVG+ L + S D S+ +F++ ++ + K H D++C+ HP L
Sbjct: 26 KIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKH--GTDRVCF-THHPSSLI 82
Query: 351 TAS 359
+S
Sbjct: 83 CSS 85
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNL---ERSRLSQDFIFKGHTGSVDQLCWHAS 332
H S+V SV W+ G LA+ DKSV I+ + E + GH+ V + WH +
Sbjct: 91 HESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPT 150
Query: 333 HPDLLSTASGDKSVRIW----DTRSHKCAATI-PTKGENINIAWSPNGNTIAVGNK 485
D+L + S D +++IW + + C T+ + + WS + N A G+K
Sbjct: 151 -MDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFN--AAGDK 203
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 189 WSCD-GRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGD 365
W+C G +L GSFD + ++ + + +GH V + W+AS LL+T D
Sbjct: 57 WTCKLGHRL--GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNAS-GSLLATCGRD 113
Query: 366 KSVRIWD 386
KSV IW+
Sbjct: 114 KSVWIWE 120
Score = 35.1 bits (77), Expect = 0.042
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +3
Query: 288 KGHTGSVDQLCWHASHPDLLSTASGDKSVRIWD----TRSHKC 404
+GHT V + W+ + ++++ S DK+VRIW+ TRS C
Sbjct: 17 EGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTC 59
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/114 (23%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS 332
Y +H++ V +VG+ CD + + SGS D +V I++L +++ +V+ + H +
Sbjct: 74 YDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEY---ESVAAVNTVVLHPN 130
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAA----TIPTKGENINIAWSPNGNTIAVGN 482
+L+S + ++R+WD R++ C+ + T ++ + W +G + N
Sbjct: 131 QTELIS-GDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMW--DGTMVVAAN 181
Score = 34.7 bits (76), Expect = 0.055
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHP 338
AH+ + S + LA+ S DK+V I+N++ +L + + GH V C +
Sbjct: 209 AHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEK--VLTGHQRWVWD-CVFSVDG 265
Query: 339 DLLSTASGDKSVRIWDTRSHK 401
+ L TAS D + R+W + K
Sbjct: 266 EFLVTASSDMTARLWSMPAGK 286
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENIN 440
+L+TAS D ++R W+ + +C TI ++N
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTIQYPDSHVN 39
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 48.8 bits (111), Expect = 3e-06
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +3
Query: 78 KHSQAPIEDL---SELRS-YFASHNTTREYI--AHSSKVHSVGWSCDGRKLASGSFDKSV 239
K S +P +DL S++ S F + +Y+ H V+ + + SG+ D+ V
Sbjct: 169 KKSASPADDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQV 228
Query: 240 AIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIP 419
++ + ++ + +GH +V + +HA D++ + S DKS+R+WD T
Sbjct: 229 KLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATKRTGIQTFR 287
Query: 420 TKGENINI-AWSPNGNTIAVGNKEDLVSF 503
+ + I A P N +A G+ ++ F
Sbjct: 288 REHDRFWILAVHPEINLLAAGHDNGMIVF 316
Score = 35.9 bits (79), Expect = 0.024
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 126 FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLE-RSRLSQDFIFKGHTG 302
+ +H + H + +V + + + S S D+++ I+N + R+ +S + GH
Sbjct: 80 YKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCIS---VLTGHNH 136
Query: 303 SVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIP 419
V +H DL+ +AS D++VR+WD + K + P
Sbjct: 137 YVMCASFHPKE-DLVVSASLDQTVRVWDIGALKKKSASP 174
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATI 416
F H G V + +H S P L + D +++W+ ++H+C T+
Sbjct: 47 FDEHEGPVRGVHFHNSQP-LFVSGGDDYKIKVWNYKTHRCLFTL 89
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+ V ++ S D K+ SGS D SV +++ + ++L ++ KGH V C +
Sbjct: 898 HTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEEL--KGHDSQVS--CVKMLSGE 951
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKEDLVSFIDTKT 518
+ TA+ D +V++WD R+ C AT+ I ++ + + +A ++ + + D ++
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRS 1011
Query: 519 YK 524
K
Sbjct: 1012 GK 1013
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/105 (27%), Positives = 52/105 (49%)
Frame = +3
Query: 180 SVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTAS 359
+ +S DGR LAS D +V I + E + + I GH + + +H H +++++ S
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLK--ILTGHRRTPWVVRFHPRHSEIVASGS 165
Query: 360 GDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDL 494
D VR+W+ ++ +C T +IA+ G +AV + L
Sbjct: 166 LDHEVRLWNAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKL 210
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/105 (27%), Positives = 52/105 (49%)
Frame = +3
Query: 180 SVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTAS 359
+ +S DGR LAS D +V I + E + + I GH + + +H H +++++ S
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLK--ILTGHRRTPWVVRFHPRHSEIVASGS 165
Query: 360 GDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDL 494
D VR+W+ ++ +C T +IA+ G +AV + L
Sbjct: 166 LDHEVRLWNAKTGECIRTHDFYRPIASIAFHAGGELLAVASGHKL 210
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 47.6 bits (108), Expect = 7e-06
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = +3
Query: 153 YIAHSSKVHSVGWS-CDGRKLASGSFDKSVAIFNLERSRLSQDFI-FKGHTGSVDQLCWH 326
+ H + +++ WS +L SG + ++ + D I F GHT SV+ L W
Sbjct: 219 FSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWS 278
Query: 327 ASHPDLLSTASGDKSVRIWDTRSHKC-AATIPTKGENIN-IAWSPNGN-TIAVGNKEDLV 497
+ ++ ++ S D SV +WD R K A + ++N I+W+ + +A G+ +
Sbjct: 279 PAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTF 338
Query: 498 SFIDTKTYK 524
S D + K
Sbjct: 339 SIRDLRLIK 347
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +3
Query: 159 AHSSKVHSVGWS-CDGRKLASGSFDKSVAIFNLERSRLSQDFI--FKGHTGSVDQLCWHA 329
AH++ V+ + W+ LASGS D + +I +L + + F+ H + + W A
Sbjct: 311 AHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSA 370
Query: 330 SHPDLLSTASGDKSVRIWDTRSHK 401
L+ SGD + IWD K
Sbjct: 371 HEASTLAVTSGDNQLTIWDLSLEK 394
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDT 389
+ SG+ D+ V ++ + ++ + +GH +V + +HA D++ + S DKS+R+WD
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDA 277
Query: 390 RSHKCAATIPTKGENINI-AWSPNGNTIAVGNKEDLVSF 503
T + + I A P N +A G+ ++ F
Sbjct: 278 TKRTGLQTFRREHDRFWILAVHPEMNLLAAGHDSGMIVF 316
Score = 33.9 bits (74), Expect = 0.096
Identities = 23/87 (26%), Positives = 43/87 (49%)
Frame = +3
Query: 126 FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGS 305
+ +H + H + +V + + + S S D+++ I+N + SR + GH
Sbjct: 80 YKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ-SRTCVS-VLTGHNHY 137
Query: 306 VDQLCWHASHPDLLSTASGDKSVRIWD 386
V +H DL+ +AS D++VR+WD
Sbjct: 138 VMCASFHPKE-DLVVSASLDQTVRVWD 163
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATI 416
F H G V + +H S P L + D +++W+ ++H+C T+
Sbjct: 47 FDEHEGPVRGVHFHNSQP-LFVSGGDDYKIKVWNYKNHRCLFTL 89
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
+ Y +H +V V + D K S D+ V +++ R+ + F +GH G V+ + ++
Sbjct: 54 KTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKF--RGHDGEVNAVKFN 111
Query: 327 ASHPDLLSTASGDKSVRIWDTRSH 398
S ++S A D+S+R+WD RSH
Sbjct: 112 DSSSVVVS-AGFDRSLRVWDCRSH 134
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 45.6 bits (103), Expect = 3e-05
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNL-ERSRLSQDFIFKGHTGSVDQLCWHASHP 338
HS KV S+ + D + + S DK+V I+ E + K H+ V + HA++
Sbjct: 263 HSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNK 322
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGEN-IN---IAWSPNGNTIAVGNKEDLVSFI 506
+S AS D + +D S C A + EN +N A+ P+G + G + +V
Sbjct: 323 YFVS-ASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIW 381
Query: 507 DTKTYKVVTE-EQFNFEVNEISWN 575
D K+ V + N E+ IS++
Sbjct: 382 DVKSQANVAKFGGHNGEITSISFS 405
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
+A+G D + +F+ ++ GH+ V + + DL+ TAS DK+VRIW
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLT--GHSKKVTSIKF-VGDTDLVLTASSDKTVRIW 291
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/105 (26%), Positives = 51/105 (48%)
Frame = +3
Query: 180 SVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTAS 359
+ +S DGR LAS D +V I + E + + GH + + +H H +++++ S
Sbjct: 111 AAAFSTDGRTLASTHGDHTVKIIDCETGNCLK--VLTGHRRTPWVVRFHPHHSEIVASGS 168
Query: 360 GDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDL 494
D VR+W+T + +C + +IA+ G +AV + L
Sbjct: 169 LDLEVRLWNTTTSECIRSHLFYRPIASIAFHAEGELLAVASGHKL 213
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +3
Query: 168 SKVHSVGWSCDGRKLASGSF-DKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDL 344
+KV + W S D +V F+ S LS FI H V + ++ P+L
Sbjct: 301 AKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPNL 360
Query: 345 LSTASGDKSVRIWDTRSHK 401
L+T S D+SV++WD +++
Sbjct: 361 LATGSADESVKLWDLSNNQ 379
Score = 34.3 bits (75), Expect = 0.073
Identities = 19/87 (21%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 201 GRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTG--SVDQLCWHASHPDLLSTASGDKSV 374
G +A G+ + S+ I++L+ + G ++ L ++ + +++++ S DK V
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKV 239
Query: 375 RIWDTRSHKCAATIPTKGENIN-IAWS 452
++WD + KC T+ + ++ +AW+
Sbjct: 240 KVWDVATGKCKVTMEHHEKKVHAVAWN 266
Score = 32.7 bits (71), Expect = 0.22
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Frame = +3
Query: 162 HSSKVHSVGW-SCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHT-GSVDQLCW--HA 329
H KVH+V W + L SGS D++V L+ R + K T V++L W H+
Sbjct: 256 HEKKVHAVAWNNYTPEVLLSGSRDRTVV---LKDGRDPSNSGLKWSTEAKVEKLAWDPHS 312
Query: 330 SHPDLLSTASGDKSVRIWDTRSHKCAATI---PTKGENINIAWSPNG-NTIAVGNKEDLV 497
H ++S G +V+ +DTR+ + + E +I+++ + N +A G+ ++ V
Sbjct: 313 EHSFVVSLKDG--TVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADESV 370
Query: 498 SFID 509
D
Sbjct: 371 KLWD 374
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H++ V + WS D LASGS D +V I+N+ + + +GH V + W
Sbjct: 117 HTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTT--VLRGHLSLVKGVTWDPI-GS 173
Query: 342 LLSTASGDKSVRIWDT 389
+++ S DK+V IW T
Sbjct: 174 FIASQSDDKTVIIWRT 189
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDF-IFKGHTGSVDQLCW-HASH 335
HS +H V G+++A+ S D ++ I + S SQ GH G V Q+ W H
Sbjct: 10 HSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPKF 69
Query: 336 PDLLSTASGDKSVRIW--DTRSHKCAATIPTKGE-NIN-IAWSPN--GNTIAVGNKEDLV 497
LL++ S D + +W ++ A + T + ++N IAW+P+ G ++A G + +
Sbjct: 70 GSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNI 129
Query: 498 SFIDTK 515
S +
Sbjct: 130 SVFSAR 135
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +3
Query: 171 KVHSVGWSCDGRKLASGSFDKSVAIFNLERSRL-SQDFIFKGHTGSVDQLCWHASHPDLL 347
K++ W + + SG D ++ I++ E +L Q GH ++ LC A L
Sbjct: 177 KINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFL 236
Query: 348 STASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKED 491
T S DK+ ++WD R+ T T +A SP N + +G +D
Sbjct: 237 -TGSHDKTAKLWDMRTLTLIKTYTTVVPVNAVAMSPLLNHVVLGGGQD 283
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 44.4 bits (100), Expect = 7e-05
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +3
Query: 249 NLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHK--CAAT-IP 419
++ S + F GH + + ++ S P+LL+T S D++V++WD +++ C AT P
Sbjct: 353 SISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNP 412
Query: 420 TKGENINIAWSP-NGNTIAVGNKEDLVSFIDT 512
G IA+SP N +A+G + DT
Sbjct: 413 NAGGLFFIAFSPDNPFLLAMGGVMGELKLWDT 444
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 294 HTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWS 452
HT SV L W+ ++L++AS DK V++WD + C T+ + + +AW+
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 285
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/90 (30%), Positives = 48/90 (53%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
R HS V V S DG+ SGS+D + +++L ++ F+ GHT V + +
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFV--GHTKDVLSVAFS 114
Query: 327 ASHPDLLSTASGDKSVRIWDTRSHKCAATI 416
+ ++S AS D+++++W+T +C TI
Sbjct: 115 TDNRQIVS-ASRDRTIKLWNTLG-ECKYTI 142
Score = 36.7 bits (81), Expect = 0.014
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKS--VRIW 383
+ S S+DK+V ++NL+ +L + GH+G ++ + A PD ASG K + +W
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLV--GHSGYLNTV---AVSPDGSLCASGGKDGVILLW 220
Query: 384 DTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTE 536
D K ++ ++ +SPN + E+ + D ++ VV +
Sbjct: 221 DLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVVED 270
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 156 IAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGS-VDQLCWHAS 332
+ HS +++V S DG ASG D + +++L + ++ GS + LC+ +
Sbjct: 190 VGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK----LYSLEAGSIIHSLCFSPN 245
Query: 333 HPDLLSTASGDKSVRIWDTRS 395
L A+ + S+RIWD S
Sbjct: 246 RYWL--CAATENSIRIWDLES 264
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 282 IFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
I + HT V + + D++ TAS DKS+ +W
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILW 43
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/126 (23%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Frame = +3
Query: 162 HSSKVHSVGWS-CDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHP 338
H+ KV +V S R + S ++D+++ +++L + + +F T + + +C
Sbjct: 314 HTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLF---TSNCNAICLSI--- 367
Query: 339 DLLSTASG--DKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKEDLVSFID 509
D L+ SG D ++R+WD ++ K + + + +++ S NGN I ++++ + D
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 427
Query: 510 TKTYKV 527
T+T ++
Sbjct: 428 TRTLEI 433
Score = 36.7 bits (81), Expect = 0.014
Identities = 25/119 (21%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Frame = +3
Query: 156 IAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASH 335
+ +S +++ S DG + SG D ++ +++++ +L + GH+ +V + +
Sbjct: 354 VLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVA--GHSSAVTSVSLSRNG 411
Query: 336 PDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAW-----SPNGNTIAVGNKEDLV 497
+L T+ D ++DTR+ + T+ G + W SP+ + +A G+ + V
Sbjct: 412 NRIL-TSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSV 469
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 44.0 bits (99), Expect = 9e-05
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRK--LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS 332
AH V+ V + G K L +GS D + +++ + Q +GHT +V +C+H
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL--EGHTHNVSAVCFHPE 240
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKEDLV 497
P ++ T S D +VRIW +++ T+ E + I + + + +G E +
Sbjct: 241 LP-IIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
Score = 35.1 bits (77), Expect = 0.042
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Frame = +3
Query: 114 LRSY-FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFK 290
+R Y + + + + + AHS + V + S S D + +++ E+ IF+
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQ-IFE 139
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTI 470
GH+ V Q+ ++ + ++AS D++++IW+ S T+ + +N +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV-----DYF 194
Query: 471 AVGNKEDLVSFIDTKTYKV 527
G+K L++ D T KV
Sbjct: 195 TGGDKPYLITGSDDHTAKV 213
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/90 (30%), Positives = 48/90 (53%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
R HS V V S DG+ SGS+D + +++L ++ F+ GHT V + +
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFV--GHTKDVLSVAFS 114
Query: 327 ASHPDLLSTASGDKSVRIWDTRSHKCAATI 416
+ ++S AS D+++++W+T +C TI
Sbjct: 115 TDNRQIVS-ASRDRTIKLWNTLG-ECKYTI 142
Score = 35.1 bits (77), Expect = 0.042
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKS--VRIW 383
+ S S+DK+V ++NL+ +L GH+G ++ + A PD ASG K + +W
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRN--TLAGHSGYLNTV---AVSPDGSLCASGGKDGVILLW 220
Query: 384 DTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNFEVNE 563
D K ++ ++ +SPN + E+ + D ++ VV + + + +
Sbjct: 221 DLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVVEDLKVDLKAEA 279
Query: 564 ISWNNTFGL 590
+ + G+
Sbjct: 280 EKTDGSTGI 288
Score = 31.9 bits (69), Expect = 0.39
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGS-VDQLCWHASHP 338
HS +++V S DG ASG D + +++L + ++ GS + LC+ +
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK----LYSLEAGSIIHSLCFSPNRY 247
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
L A+ + S+RIWD S + K + A +G+T +GNK ++
Sbjct: 248 WL--CAATENSIRIWDLESKSVVEDL--KVDLKAEAEKTDGST-GIGNKTKVI 295
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/77 (35%), Positives = 38/77 (49%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H +V SV +S +G LASG D I++L +L +I H V Q+ +
Sbjct: 171 HIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLL--YIIPAHVNLVSQVKYEPQERY 228
Query: 342 LLSTASGDKSVRIWDTR 392
L+TAS D +V IW R
Sbjct: 229 FLATASHDMNVNIWSGR 245
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 282 IFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDT 389
+ KGH V + + + + L+TAS D++ +IW T
Sbjct: 101 VLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKT 136
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +3
Query: 189 WSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTAS 359
WS DG ++SGS D + IF++ + S K H V + WH+S+P L+S +S
Sbjct: 590 WSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEWHSSYPLLVSISS 646
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRK--LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS 332
AH V+ V + G K L +GS D + +++ + Q GHT +V +C+H
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL--DGHTHNVSAVCFHPE 240
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKEDLV 497
P ++ T S D +VRIW +++ T+ E + I + + + +G E +
Sbjct: 241 LP-IIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
Score = 34.3 bits (75), Expect = 0.073
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +3
Query: 114 LRSY-FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFK 290
+R Y + + + + + AHS + V + S S D + +++ E IF+
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQ-IFE 139
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTI 470
GH+ V Q+ ++ + ++AS D++++IW+ S T+ + +N +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV-----DYF 194
Query: 471 AVGNKEDLVSFIDTKTYKV 527
G+K L++ D T KV
Sbjct: 195 TGGDKPYLITGSDDHTAKV 213
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRK--LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS 332
AH V+ V + G K L +GS D + +++ + Q GHT +V +C+H
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL--DGHTHNVSAVCFHPE 240
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKEDLV 497
P ++ T S D +VRIW +++ T+ E + I + + + +G E +
Sbjct: 241 LP-IIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
Score = 34.3 bits (75), Expect = 0.073
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +3
Query: 114 LRSY-FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFK 290
+R Y + + + + + AHS + V + S S D + +++ E IF+
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQ-IFE 139
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTI 470
GH+ V Q+ ++ + ++AS D++++IW+ S T+ + +N +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV-----DYF 194
Query: 471 AVGNKEDLVSFIDTKTYKV 527
G+K L++ D T KV
Sbjct: 195 TGGDKPYLITGSDDHTAKV 213
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRK--LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS 332
AH V+ V + G K L +GS D + +++ + Q GHT +V +C+H
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL--DGHTHNVSAVCFHPE 240
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKEDLV 497
P ++ T S D +VRIW +++ T+ E + I + + + +G E +
Sbjct: 241 LP-IIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
Score = 34.3 bits (75), Expect = 0.073
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +3
Query: 114 LRSY-FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFK 290
+R Y + + + + + AHS + V + S S D + +++ E IF+
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQ-IFE 139
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTI 470
GH+ V Q+ ++ + ++AS D++++IW+ S T+ + +N +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV-----DYF 194
Query: 471 AVGNKEDLVSFIDTKTYKV 527
G+K L++ D T KV
Sbjct: 195 TGGDKPYLITGSDDHTAKV 213
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +3
Query: 156 IAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASH 335
I+H V W DG + SG DK ++ L Q H G + + W
Sbjct: 69 ISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSG--GQPVTVAMHEGPIAAMAWIPGM 126
Query: 336 PDLLSTASGDKSVRIWDTRSHKCAAT--IPTKGENINI 443
+LL+T S DK+++ WDTR T +P K +++
Sbjct: 127 -NLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSV 163
Score = 34.3 bits (75), Expect = 0.073
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDL 344
+ + S+ +S L + S+D V + + RS S K + A D
Sbjct: 25 ADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDG 84
Query: 345 LSTASG--DKSVRIWDTRSHKCAATIPT-KGENINIAWSPNGNTIAVGNKEDLVSFIDTK 515
+ SG DK ++W S T+ +G +AW P N +A G+ + + + DT+
Sbjct: 85 TTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTR 144
Query: 516 TYKVVTEEQ 542
V +Q
Sbjct: 145 QQNPVHTQQ 153
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Frame = +3
Query: 150 EYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHA 329
E H V + +S DG+ LASG D V IF+ L + G ++ + WH
Sbjct: 108 ELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLK--CVLDGPGAGIEWVRWHP 165
Query: 330 SHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIA---WSPNGNTIAVGNKEDLVS 500
+L +G + +W + K A G N+N+ ++P+G I G+ + +
Sbjct: 166 RGHIVL---AGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLI 222
Query: 501 FIDTKT 518
+ KT
Sbjct: 223 VWNPKT 228
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWSPNG 461
F GH G + L + L++T GD +W + AA +P ++++ +A+S +G
Sbjct: 66 FTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDG 125
Query: 462 NTIAVGNKEDLVSFIDTKT 518
+A G + +V D +
Sbjct: 126 QLLASGGLDGVVQIFDASS 144
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 294 HTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWS 452
HT SV L W+ ++L++AS DK V++WD + C T+ + + +AW+
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 317
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +3
Query: 261 SRLSQDFIFKGHTGS--VDQLCWHASHPDLLSTASGDKSVRIWDTRSHK--CAAT-IPTK 425
S L+ + + H V + ++ S P+LL+T S DKSV++WD +++ C AT P
Sbjct: 390 SDLNPTYTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNA 449
Query: 426 GENINIAWS-PNGNTIAVGNKEDLVSFIDT 512
G +I+++ N +A+G + + DT
Sbjct: 450 GAVFSISFAVDNPFLLAIGGSKGELHVWDT 479
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Frame = +3
Query: 288 KGHTGSVDQLCWH---ASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPN 458
KGH+ +V+Q+ + A+ P +L + S D ++R WDTRS + + I T + ++S
Sbjct: 80 KGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYG 139
Query: 459 G---NTIAVGNKEDLVSFIDTKTYKVVT--EEQFNFEVNEI 566
G N +A G KE ++ + D + K V EE +V ++
Sbjct: 140 GAADNLLAGGCKEQVLLW-DWRNSKQVACLEESHMDDVTQV 179
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 171 KVHSVGWSCDGRKLASGSFDKSVAIFNLERSRL-SQDFIFKGHTGSVDQLCWHASHPDLL 347
+++ W + + SG DK + I++ E +L Q GH + LC A L
Sbjct: 150 RINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFL 209
Query: 348 STASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKED 491
T S DK+ ++WD R+ T T ++ SP N + +G +D
Sbjct: 210 -TGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 171 KVHSVGWSCDGRKLASGSFDKSVAIFNLERSRL-SQDFIFKGHTGSVDQLCWHASHPDLL 347
+++ W + + SG DK + I++ E +L Q GH + LC A L
Sbjct: 150 RINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFL 209
Query: 348 STASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKED 491
T S DK+ ++WD R+ T T ++ SP N + +G +D
Sbjct: 210 -TGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/77 (37%), Positives = 37/77 (48%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V SV +S +G LASG D I++L R R S +I H V Q+ +
Sbjct: 422 HIKPVFSVNFSPNGYHLASGGEDNQCRIWDL-RMRKSL-YIIPAHANLVSQVKYEPQEGY 479
Query: 342 LLSTASGDKSVRIWDTR 392
L+TAS D V IW R
Sbjct: 480 FLATASYDMKVNIWSGR 496
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +3
Query: 138 NTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQL 317
NT H + V +S LA+ S D++ ++ + + L F+GH + ++
Sbjct: 289 NTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQT---FEGHLDRLARV 345
Query: 318 CWHASHPDLLSTASGDKSVRIWD 386
+H S L T S DK+ R+WD
Sbjct: 346 AFHPSGK-YLGTTSYDKTWRLWD 367
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIF-NLERSRLSQDFIFKGHTGSVDQLCWHASHP 338
HS KV SV + D + + S DK+V I+ N + + H+ V + H ++
Sbjct: 263 HSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNK 322
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN---IAWSPNGNTIAVGNKEDLVSFID 509
+S AS D + +D S C A + +N++ A+ P+G + G + +V D
Sbjct: 323 YFVS-ASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWD 381
Query: 510 TKTYKVVTE-EQFNFEVNEISWN 575
K+ V + + EV IS++
Sbjct: 382 VKSQANVAKFDGHTGEVTAISFS 404
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
+A+G D + +F+ ++ GH+ V + + DL+ TAS DK+VRIW
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLT--GHSKKVTSVKF-VGDSDLVLTASADKTVRIW 291
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 42.3 bits (95), Expect = 3e-04
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIF-NLERSRLSQDFIFKGHTGSVDQLCWHASHP 338
HS KV SV + D + + S DK+V I+ N + + H+ V + H ++
Sbjct: 263 HSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNK 322
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN---IAWSPNGNTIAVGNKEDLVSFID 509
+S AS D + +D S C A + +N++ A+ P+G + G + +V D
Sbjct: 323 YFVS-ASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWD 381
Query: 510 TKTYKVVTE-EQFNFEVNEISWN 575
K+ V + + EV IS++
Sbjct: 382 VKSQANVAKFDGHTGEVTAISFS 404
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
+A+G D + +F+ ++ GH+ V + + DL+ TAS DK+VRIW
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLT--GHSKKVTSVKF-VGDSDLVLTASADKTVRIW 291
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 126 FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERS-RLSQDFIFKGHTG 302
F H++ RE HS+ V+ + +S DG K + S DK I++ + ++ + GH G
Sbjct: 41 FKFHSSHRE---HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKG 97
Query: 303 SVDQLCWHASHPDLLSTASGDKSVRIWD 386
S+ + W +L T S DKS ++W+
Sbjct: 98 SIYAVSWSPDSKRVL-TVSADKSAKVWE 124
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H+++++S+ WS + + +A+GS D V ++ +++ S+ H G V+ + A D
Sbjct: 398 HTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAV---AFIDD 454
Query: 342 LLSTASG-DKSVRIW 383
+SG D SVR+W
Sbjct: 455 CTVASSGEDASVRLW 469
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Frame = +3
Query: 192 SCDGRKLASGSFDKSVAIFNLER-SRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGD- 365
S DG++ G D + I+++ + L ++ + + H G++ + + PDL ASGD
Sbjct: 320 SPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYS---PDLTMFASGDA 376
Query: 366 -KSVRIWD--TRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
+ +WD T+ K + ++AWSPN +A G+ + V
Sbjct: 377 NREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCV 423
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNL 254
H +++V WS D +++ + S DKS ++ +
Sbjct: 95 HKGSIYAVSWSPDSKRVLTVSADKSAKVWEV 125
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKG-HTGSVDQLCWHASHP 338
++S V+ WS DGR LA V ++ +R + F +G H ++ L W A +
Sbjct: 194 NTSIVNIPRWSPDGRTLAVPGLRNDVVMY--DRFTGEKLFALRGDHLEAICYLTW-APNG 250
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAV 476
++T+ DK V +WD + + ++W PNGN ++V
Sbjct: 251 KYIATSGLDKQVLLWDVDKKQDIDRHKFEERICCMSWKPNGNALSV 296
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLST 353
+ + ++ G LA+ D+ + + N + + + KGH G V L +H + +LL++
Sbjct: 107 IRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVR--VLKGHKGPVTGLDFHPNG-ELLAS 163
Query: 354 ASGDKSVRIWDTRSHKCAATI----PTKGENINIA----WSPNGNTIAV-GNKEDLVSF 503
+V W+ ++ + T+ P G N +I WSP+G T+AV G + D+V +
Sbjct: 164 IDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMY 222
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFK-GHTGSVDQLCWHASHP 338
HS+ V+ V ++ DG K + S DK I++ + + + GH GS+ + W
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Query: 339 DLLSTASGDKSVRIWD 386
+L T S DKS +IWD
Sbjct: 246 QVL-TVSADKSAKIWD 260
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = +3
Query: 198 DGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGD--KS 371
DG + G D + ++++ L+++ + + H G++ + + PDL AS D +
Sbjct: 458 DGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYS---PDLSMFASADLNRE 514
Query: 372 VRIWDTRSHKCAA-TIPTKGENIN-IAWSPNGNTIAVGNKEDLV 497
+WD S + + IN +AWSPN +A G+ + V
Sbjct: 515 AVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCV 558
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/79 (25%), Positives = 42/79 (53%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
+ + HS++++ + WS + +A+GS D V ++ +++ S+ I H G V L +
Sbjct: 528 KNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGF- 586
Query: 327 ASHPDLLSTASGDKSVRIW 383
A ++S+ D +R+W
Sbjct: 587 ADDSHVVSSGE-DACIRVW 604
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLE---RSRLSQDFIFKGHTGSVDQL 317
H +++V WS DG+++ + S DKS I+++ L+ G +G VD +
Sbjct: 231 HKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDM 285
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 41.5 bits (93), Expect = 5e-04
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Frame = +3
Query: 210 LASGSFDKSVAIFNL--ERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
LA G+ D S+ + +L E S L Q GH+ V + +S+ ++++S DK++R+W
Sbjct: 188 LAYGASDGSLTVCSLLEEPSVLKQ---LTGHSKDVTDFDF-SSNNQYIASSSLDKTIRVW 243
Query: 384 DTRSHKCAATIPTKGENINIAWSP-NGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNFEVN 560
+ C I I + P N N ++ GN ++ + T +++ + F EV
Sbjct: 244 ELSRGVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFEDEVT 303
Query: 561 EISWNNTFGLVLPHQWIGMRTYYDLSI 641
+ ++T ++ G T Y +S+
Sbjct: 304 SMDHDHTGQIIFCGD--GQGTVYSVSM 328
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/119 (19%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLC-- 320
++ HS V +S + + +AS S DK++ ++ L R + G Q C
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRG-----VCIRVIYGISPQYCIR 264
Query: 321 WHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
+H + + LS + +K + +++ + + + + E ++ G I G+ + V
Sbjct: 265 FHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFEDEVTSMDHDHTGQIIFCGDGQGTV 323
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +3
Query: 264 RLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINI 443
RLSQ+ +GH G V+ L W+ S+ LL + S D + IW+ S K +I T G NI
Sbjct: 39 RLSQEQELEGHQGCVNALAWN-SNGSLLISGSDDLRINIWNYSSRKLLHSIDT-GHTANI 96
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
+E H V+++ W+ +G L SGS D + I+N +L I GHT ++ +
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHS-IDTGHTANIFCTKFV 102
Query: 327 ASHPD-LLSTASGDKSVRIWDT 389
D L+ + +GD VR+++T
Sbjct: 103 PETSDELVVSGAGDAEVRLFNT 124
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +3
Query: 243 IFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPT 422
I+N RS+ Q F + T SV + ++ P+LL+T++ D+S+ I+D R A I
Sbjct: 177 IWNHNRSQPVQSF--QWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAARKIIM 234
Query: 423 KGENINIAWSP 455
+ +IAW+P
Sbjct: 235 MTKTNSIAWNP 245
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQL-C-WHASH 335
H S V + +S GR+ +GS+D+SV IF + + HT + ++ C ++
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIY----HTKRMQRVFCVKYSCD 333
Query: 336 PDLLSTASGDKSVRIWDTRS 395
+ + S D ++R+W ++
Sbjct: 334 ATYVISGSDDTNLRLWKAKA 353
Score = 27.5 bits (58), Expect = 8.4
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIP-TKGENINIAWSPNGNT 467
GH V + + ++ + +AS D +R+WD S + P +G + S +GN
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNV 113
Query: 468 IAVGNKEDLVSFIDTKTYKV----VTEEQFNFEVNEISWNNTFGLVLPHQWIG 614
+ + V + + ++ E F W N F V HQ+ G
Sbjct: 114 LVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAV-DHQFEG 165
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 41.1 bits (92), Expect = 6e-04
Identities = 27/87 (31%), Positives = 40/87 (45%)
Frame = +3
Query: 123 YFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTG 302
Y ASH H + + WS DG K+ S S D+S I+ ++ + +F GH+
Sbjct: 223 YSASHML--RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLF-GHSV 279
Query: 303 SVDQLCWHASHPDLLSTASGDKSVRIW 383
V C S L+ TA D + R+W
Sbjct: 280 RVWDCCISDS---LIVTAGEDCTCRVW 303
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATI 416
GH GS+ ++ W ++S S D+S RIW+ S + +
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSV-SDDRSARIWEIDSQEVVGPV 273
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 41.1 bits (92), Expect = 6e-04
Identities = 27/87 (31%), Positives = 40/87 (45%)
Frame = +3
Query: 123 YFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTG 302
Y ASH H + + WS DG K+ S S D+S I+ ++ + +F GH+
Sbjct: 223 YSASHML--RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLF-GHSV 279
Query: 303 SVDQLCWHASHPDLLSTASGDKSVRIW 383
V C S L+ TA D + R+W
Sbjct: 280 RVWDCCISDS---LIVTAGEDCTCRVW 303
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATI 416
GH GS+ ++ W ++S S D+S RIW+ S + +
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSV-SDDRSARIWEIDSQEVVGPV 273
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
+ASGS D V I++ +L + GH G+V+ + W ++ +L++AS D ++RIW
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVEL--PGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 40.7 bits (91), Expect = 8e-04
Identities = 33/142 (23%), Positives = 56/142 (39%)
Frame = +3
Query: 117 RSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGH 296
+++ +E H+ V + WS D L S S DK+V ++ R+ Q H
Sbjct: 256 KAFHIEETPFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLW---RTGCDQCLHVFHH 311
Query: 297 TGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAV 476
V + ++ + + ++ S D RIW + A + I++ PNGN V
Sbjct: 312 NNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVV 371
Query: 477 GNKEDLVSFIDTKTYKVVTEEQ 542
G F V+ +EQ
Sbjct: 372 GCITGNCRFYQILDNDVIMDEQ 393
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSP-NG 461
F+GHTG V + W S + L +AS DK+VR+W S+ C ++ ++P N
Sbjct: 324 FRGHTGEVLDISW--SKDNYLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVNE 381
Query: 462 NTIAVGN 482
N G+
Sbjct: 382 NYFMSGS 388
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDG-RKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGS-----V 308
R+ H V + ++ +LASG+ D +V I++L ++ KG TGS +
Sbjct: 109 RDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYL-KG-TGSYMQSEI 166
Query: 309 DQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNG-NTIAVGNK 485
L W+ +L++ S + + IWD + K + T + W P+ N I V +
Sbjct: 167 SSLSWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLKTTVRCSVLQWDPDHFNQILVASD 226
Query: 486 ED 491
ED
Sbjct: 227 ED 228
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPT-KGENINIAWSP 455
F GH V + W S L T D W+T++ K A +PT + N ++ W P
Sbjct: 248 FVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYP 305
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/110 (23%), Positives = 45/110 (40%)
Frame = +3
Query: 150 EYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHA 329
E++ HS + + WS + R L S S D SV ++ + F H V + ++
Sbjct: 351 EFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQIGCEDCLGIF---SHNNYVTSVQFNP 406
Query: 330 SHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVG 479
D + S D VRIW + +G + + P+G + +G
Sbjct: 407 VDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIG 456
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/110 (23%), Positives = 45/110 (40%)
Frame = +3
Query: 150 EYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHA 329
E++ HS + + WS + R L S S D SV ++ + F H V + ++
Sbjct: 351 EFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQIGCEDCLGIF---SHNNYVTSVQFNP 406
Query: 330 SHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVG 479
D + S D VRIW + +G + + P+G + +G
Sbjct: 407 VDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIG 456
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 177 HSVGWSC--DGRK-LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLL 347
++V W+C +G +A+G + + ++ + + + GH SV+++ P L+
Sbjct: 87 YTVSWACGVNGNPYVAAGGVKGIIRVIDVNSETIHKSLV--GHGDSVNEIRTQPLKPQLV 144
Query: 348 STASGDKSVRIWDTRSHKC 404
TAS D+SVR+W+ + C
Sbjct: 145 ITASKDESVRLWNVETGIC 163
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 39.1 bits (87), Expect = 0.003
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 21/130 (16%)
Frame = +3
Query: 183 VGWSCDGRKLASGSFDKSVAI--FNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTA 356
V WS K A GS K+V I + E + I K H SV + WH ++ LL+T
Sbjct: 105 VQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNV-LLATT 163
Query: 357 SGDKSVRIW-------DTR-SHKCAATIPTKGENI-----------NIAWSPNGNTIAVG 479
S D R++ DT+ +H + I + WSP+GNT+A
Sbjct: 164 STDGKCRVFSTFIKGVDTKYAHYLNGAFFLLKQQILQLDLSYSWAFGVKWSPSGNTLAYV 223
Query: 480 NKEDLVSFID 509
++ F+D
Sbjct: 224 GHSSMIYFVD 233
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Frame = +3
Query: 189 WSCDGRKLASGSFDKSVAIF-NLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGD 365
WS D +A + V I+ +L + + + + H V + W +S + + T S D
Sbjct: 18 WSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDW-SSKSNKIVTVSHD 76
Query: 366 KSVRIWDTRSHKCAATIPTKGEN---INIAWSPNGNTIAVGN 482
++ +W + T+ N + + WSP N AVG+
Sbjct: 77 RNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGS 118
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLE--RSRLSQDFIFKGHTGSVDQLCWHASH 335
H S V+++ + DG L SGS D+S+ ++ E + ++ +GH ++ L ++ S
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVS- 336
Query: 336 PDLLSTASGDKSVRIW 383
DLL + S D++VRIW
Sbjct: 337 -DLLLSGSADRTVRIW 351
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 351 TASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWSPNGNTIAVGNKE 488
+ S DK+++IW +C +I + +N IA S NG T+ G+ +
Sbjct: 210 SVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNG-TVYTGSAD 255
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDT-RSHKCAATIPTKGENINIAWSP-N 458
F+GHTG + L W S L ++S D++VR+W S +C K +A++P +
Sbjct: 359 FRGHTGEILDLSW--SEKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVD 416
Query: 459 GNTIAVGNKEDLVSFIDTKTYKVV 530
N G+ + V D ++VV
Sbjct: 417 DNYFISGSIDGKVRIWDVSQFRVV 440
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFN-LERSRLSQDF 281
+E+ AH + + +S DG+ LAS D V ++N +E R +F
Sbjct: 251 QEFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNIIEDERRDNEF 296
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +3
Query: 144 TREYIAHSSKVHSVGWSCDGRK--LASGSFDKSVAIFNLERSRLSQDF--IFKGHTGSVD 311
T + H V S+ + D K L SGS D +V +++L + I + H +V
Sbjct: 137 THYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVT 196
Query: 312 QLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPT 422
+ L S A DK V +WD + C AT+ T
Sbjct: 197 SIALSEDGLTLFS-AGRDKVVNLWDLHDYSCKATVAT 232
Score = 37.5 bits (83), Expect = 0.008
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Frame = +3
Query: 60 KAMKDSKHSQAPIEDLSELRSY-FASHNTTREYIAHSSKVHSVGW--SCDGRKL-ASGSF 227
K + D + A +L E+R Y A+ + + H V S+ S G L +GS
Sbjct: 365 KFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSK 424
Query: 228 DKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW--DTRSHK 401
DK+V ++N S + GH G + + + + SGD+++++W D S
Sbjct: 425 DKTVRLWNATSK--SCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISED 482
Query: 402 CAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
I K ++ A + N++AV + LV
Sbjct: 483 SEEPINLKTRSVVAAHDKDINSVAVARNDSLV 514
Score = 37.1 bits (82), Expect = 0.010
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 144 TREYIA-HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLC 320
TR +A H ++SV + + + +GS D++ +I+ L L KGH + +
Sbjct: 491 TRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPD--LVHVVTLKGHKRRIFSVE 548
Query: 321 WHASHPDLLSTASGDKSVRIWDTRSHKCAAT 413
+ ++ + TASGDK+V+IW C T
Sbjct: 549 F-STVDQCVMTASGDKTVKIWAISDGSCLKT 578
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGN 464
+KGHTG+V + +S + +++ S D SVR+W+ + +C + +AW+P
Sbjct: 419 YKGHTGAVTSISTDSSG-EWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPLSR 477
Query: 465 --TIAVGNKEDLVSFIDTK 515
+AV DL F++T+
Sbjct: 478 LPVLAVAMGRDLF-FLNTE 495
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 38.7 bits (86), Expect = 0.003
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
R+ AH +V + DG+++ + S D S+ ++E + H +V+ L
Sbjct: 45 RKVRAHKESCRAVRFIDDGQRIVTASADCSILATDVETGA-QVAHLENAHEDAVNTLI-- 101
Query: 327 ASHPDLLSTASGDKS--VRIWDTRSHKCAATIPTKGENIN-IAWSPNGNTIAVGNKEDLV 497
+ + ASGD V+IWDTR C+ + I+ + ++ + + V + + +
Sbjct: 102 --NVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTL 159
Query: 498 SFIDTKTYKVVTEEQFN 548
S + +T KV ++ +F+
Sbjct: 160 SVCNLRTSKVQSQSEFS 176
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 38.3 bits (85), Expect = 0.004
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +3
Query: 150 EYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVD--QLCW 323
+ IAH +VH + W + R AS S D SV IF+L R + I++ +L W
Sbjct: 170 QLIAHDKEVHDIAWG-EARVFASVSADGSVRIFDL-RDKEHSTIIYESPQPDTPLLRLAW 227
Query: 324 HASHPDLLSTASGDKS-VRIWDTRSHKC-AATIPTKGENIN-IAWSP 455
+ ++T D + V I D RS A + ++N IAW+P
Sbjct: 228 NKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAP 274
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 38.3 bits (85), Expect = 0.004
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +3
Query: 150 EYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVD--QLCW 323
+ IAH +VH + W + R AS S D SV IF+L R + I++ +L W
Sbjct: 170 QLIAHDKEVHDIAWG-EARVFASVSADGSVRIFDL-RDKEHSTIIYESPQPDTPLLRLAW 227
Query: 324 HASHPDLLSTASGDKS-VRIWDTRSHKC-AATIPTKGENIN-IAWSP 455
+ ++T D + V I D RS A + ++N IAW+P
Sbjct: 228 NKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAP 274
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 38.3 bits (85), Expect = 0.004
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = +3
Query: 150 EYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVD--QLCW 323
+ IAH +VH + W + R AS S D SV IF+L R + I++ +L W
Sbjct: 170 QLIAHDKEVHDIAWG-EARVFASVSADGSVRIFDL-RDKEHSTIIYESPQPDTPLLRLAW 227
Query: 324 HASHPDLLSTASGDKS-VRIWDTRSHKC-AATIPTKGENIN-IAWSP 455
+ ++T D + V I D RS A + ++N IAW+P
Sbjct: 228 NKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAP 274
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +3
Query: 159 AHSSKVHSVGWSC-DGRKLASGSFDKSVAIF---NLERSRL-SQDFIFKGHTGSVDQLCW 323
AH + +H V W+ D + +GS D +V +F NL + + S + F+GH +V + W
Sbjct: 324 AHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQW 383
Query: 324 HASHPDLLSTASGDKSVRIWD 386
+ +++ D + IWD
Sbjct: 384 SPDKSSVFGSSAEDGLLNIWD 404
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +3
Query: 282 IFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN---IAWS 452
I+ GH +V+ + + S + D + +WD R+ A K + + + W+
Sbjct: 276 IYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWN 335
Query: 453 P-NGNTIAVGNKEDLVSFIDTK 515
P + N I G+ ++ V D +
Sbjct: 336 PHDNNLILTGSADNTVRVFDRR 357
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +3
Query: 153 YIAHSSKVHSVGWS-CDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHA 329
Y H V V + ++ S D + +++ + K H + + W+
Sbjct: 277 YNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNP 336
Query: 330 SHPDLLSTASGDKSVRIWDTRS 395
+L+ T S D +VR++D R+
Sbjct: 337 HDNNLILTGSADNTVRVFDRRN 358
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCW-HASHPD 341
S V V WS DG L + ++ + S L Q H G V+ L + H +
Sbjct: 409 SISVTRVAWSPDGNLLGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQM 468
Query: 342 LLSTASGDKSVRIWDTRSHK 401
+ T DK +++WD K
Sbjct: 469 CVVTCGDDKLIKVWDLSGKK 488
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 38.3 bits (85), Expect = 0.004
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +3
Query: 297 TGSVDQLCWHASHPD--LLSTASGDKSVRIWDTRSHKCAATI--PTKGENINIAWSPNGN 464
+G +D A HPD ST + DK+ R+WD R+ + T+ G +I ++ +G
Sbjct: 316 SGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGK 375
Query: 465 TIAVGNKEDLVSFIDTKT-YKVVTEEQFNFEVNEISWN 575
+A+ D V D Y+ E F E++ IS++
Sbjct: 376 YMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFS 413
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 189 WSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTAS 359
WS DG + SGS D + +F++ + K H V + WH S P L+S +S
Sbjct: 446 WSPDGLYITSGSVDPVIHVFDIRYNARKPTQSIKAHQKRVFKAEWHYSQPLLISISS 502
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 37.9 bits (84), Expect = 0.006
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLC-WHASHP 338
H+S + V ++C LAS S + + NL + + K G V +L + S
Sbjct: 134 HTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATE--LKDPNGQVLRLLDYSRSSR 191
Query: 339 DLLSTASGDKSVRIWDT--RSHKCAATIPTKGENINIAWSPNGNTI--AVGNKEDLVSF 503
LL TA D +V +WDT RS K + + +SP+ I +VG + L ++
Sbjct: 192 HLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYTY 250
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +3
Query: 135 HNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNL------ERSRLSQDFIFKGH 296
H+ H S V+++ S DG+ L SG+ D+S+ ++ E +S +GH
Sbjct: 268 HSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGH 327
Query: 297 TGSVDQLCWHASHPDLLSTASGDKSVRIW 383
++ +C A DL+ + S DKS+R+W
Sbjct: 328 RKAI--MCL-AVASDLVLSGSADKSLRVW 353
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 294 HTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATI 416
H +V L + LL +AS D+S +IW T KC +I
Sbjct: 191 HVDAVSSLAL-SQDGSLLYSASWDRSFKIWRTSDFKCLDSI 230
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 171 KVHSVGWSCDGRKLASGSFDKSVAIFNLERSRL-SQDFIFKGHTGSVDQLCWHASHPDLL 347
+++ W + + SG DK + I++ E +L Q GH + LC A L
Sbjct: 150 RINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFL 209
Query: 348 STASGDKSVRIWDTRSHKCAATIPT 422
T S DK+ ++WD R+ T T
Sbjct: 210 -TGSLDKTAKLWDMRTLTLLKTYTT 233
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 37.5 bits (83), Expect = 0.008
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +3
Query: 297 TGSVDQLCWHASHPD--LLSTASGDKSVRIWDTR--SHKCAATIPTKGENINIAWSPNGN 464
+G +D A HPD ST + DK+ R+WD R S A G +I ++ +G
Sbjct: 314 SGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGK 373
Query: 465 TIAVGNKEDLVSFIDTKT-YKVVTEEQFNFEVNEISWN 575
+A+ D V D Y+ E F E++ IS++
Sbjct: 374 YMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFS 411
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDT-RSHKCAATIPTKGENI-NIAWSPN 458
+ GHT V + + LL +A D V+IWD S KC T + + +I +S +
Sbjct: 278 WSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSND 337
Query: 459 GNTIAVGNKEDLVSFIDTKTYKVVT 533
G+ + + + DT+T +V++
Sbjct: 338 GSKFLTAGYDKNIKYWDTETGQVIS 362
Score = 35.9 bits (79), Expect = 0.024
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Frame = +3
Query: 144 TREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCW 323
T+EY H V+++ + + R+ + S DKS+ ++ + + +I + H S+ +
Sbjct: 405 TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK-YISEPHMHSMPSISV 463
Query: 324 HASHPDLLSTASGDKSVRIWDTRSH------KCAATIPTKGENINIAWSPNGNTIAVGNK 485
H + + L+ S D + I+ TR K A G + +SP+G + G+
Sbjct: 464 H-PNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 522
Query: 486 EDLVSFIDTKTYKV 527
E F D K+ KV
Sbjct: 523 EGKCWFWDWKSCKV 536
Score = 35.1 bits (77), Expect = 0.042
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Frame = +3
Query: 201 GRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRI 380
G L S D V I+++ S + GH +V +C+ L TA DK+++
Sbjct: 295 GHLLLSAGMDCKVKIWDVYNSGKCMR-TYMGHAKAVRDICFSNDGSKFL-TAGYDKNIKY 352
Query: 381 WDTRSHKCAATIPTKGENINIAWSPNG---NTIAVGNKEDLVSFIDTKTYKVVTE-EQFN 548
WDT + + +T T + +P+ N + G + + D T +V E +Q
Sbjct: 353 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHL 412
Query: 549 FEVNEISW 572
VN I++
Sbjct: 413 GAVNTITF 420
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +3
Query: 171 KVHSVGWSCDGRKLASGSFDKSVAIFNLERSR------LSQDFIFKGHTGSVDQLCWHAS 332
K H S +GR LA+ +F V ++ + + +S+ KGH +V LC+ +
Sbjct: 241 KNHMAAVSPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPN 300
Query: 333 HPDLLSTASGDKSVRIWD 386
++ TAS D S+R+W+
Sbjct: 301 SEQII-TASKDGSIRVWN 317
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 37.1 bits (82), Expect = 0.010
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
Frame = +3
Query: 156 IAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH--A 329
+ S+ V SV ++C+GRK+ + D+ + +F++ R + S + HT ++ + A
Sbjct: 476 VCGSAAVTSVKFACNGRKMLTSGADR-LQMFDVNR-KASSVRLSPSHTQTLSHGTIYDVA 533
Query: 330 SHP--DLLSTASGDKSVRIWDTRSHKCAATIP---TKGENINIAWSPNGNTIAVGNKEDL 494
P L+ T DK + I+D S K + G+ + + P+ N +
Sbjct: 534 VDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVILDPSCNYLVCSYSNRT 593
Query: 495 VSFIDTKTYKVVTE 536
+ F+D T ++V +
Sbjct: 594 ICFVDFVTGELVAQ 607
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 IFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPT 422
IF++ L + FKGH G + L W S L ++S D++VR+W +C T
Sbjct: 307 IFSISEKPLHE---FKGHIGEILDLSW--SEKGYLLSSSVDETVRLWRVGCDECLRTFTH 361
Query: 423 KGENINIAWSP-NGNTIAVGNKEDLVSFIDTKTYKVV 530
+A++P + N G+ + V D +VV
Sbjct: 362 NNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVV 398
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 IFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPT 422
IF++ L + FKGH G + L W S L ++S D++VR+W +C T
Sbjct: 307 IFSISEKPLHE---FKGHIGEILDLSW--SEKGYLLSSSVDETVRLWRVGCDECLRTFTH 361
Query: 423 KGENINIAWSP-NGNTIAVGNKEDLVSFIDTKTYKVV 530
+A++P + N G+ + V D +VV
Sbjct: 362 NNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTRCRVV 398
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 37.1 bits (82), Expect = 0.010
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 2/145 (1%)
Frame = +3
Query: 111 ELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFK 290
++R + A T A V++ S DG+ LA I + ++ +
Sbjct: 230 KIRVFDAQSFTRVSEFALDWSVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSL--R 287
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTR--SHKCAATIPTKGENINIAWSPNGN 464
GH WH + +L+T + D + R+WD R S A G + ++P G
Sbjct: 288 GHKDYSFASAWHPNGL-ILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGR 346
Query: 465 TIAVGNKEDLVSFIDTKTYKVVTEE 539
+A+ D V DT++ + ++E
Sbjct: 347 FLAMAEPADFVHIFDTQSGFLQSQE 371
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/94 (28%), Positives = 41/94 (43%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDL 344
S H G S +A+G +F+L + + + H G V +L SH L
Sbjct: 412 SQTKHGDGASVSPSWIAAGFSSGQCRLFDLRENGFISSW--RAHDGYVTKLVAPESH--L 467
Query: 345 LSTASGDKSVRIWDTRSHKCAATIPTKGENINIA 446
L ++S DK++RIWD R KG N ++
Sbjct: 468 LVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVS 501
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 36.7 bits (81), Expect = 0.014
Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
R HS V ++ G AS S D V +F+++ + + + V + +
Sbjct: 54 RTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIA--VLEAPPSEVWGMQFE 111
Query: 327 ASHPDLLSTASGDKSVRIWDTRSHKCAATI-------PTKGEN-------INIAWSPNGN 464
L SV++WDT S + +T+ P + +++AWSPNG
Sbjct: 112 PKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGK 171
Query: 465 TIAVGNKEDLVSFIDTKTYKVVTE-EQFNFEVNEI 566
+A G+ + + D K++ + E N V +
Sbjct: 172 RLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSL 206
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +3
Query: 159 AHSSKVHSVGWSC-DGRKLASGSFDKSVAIFNLERSRL----SQDFIFKGHTGSVDQLCW 323
AH + +H V W+ D + +GS D +V +F+ + S + F+GH +V + W
Sbjct: 335 AHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQW 394
Query: 324 HASHPDLLSTASGDKSVRIWD 386
+ +++ D + IWD
Sbjct: 395 SPDKSSVFGSSAEDGLLNIWD 415
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +3
Query: 282 IFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN---IAWS 452
++ GH +V+ + + + + D + +WD R+ T K + + + W+
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWN 346
Query: 453 P-NGNTIAVGNKEDLVSFIDTK 515
P + N I G+ ++ V D +
Sbjct: 347 PHDDNLILTGSADNTVRLFDRR 368
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 36.3 bits (80), Expect = 0.018
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 12/140 (8%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSR--LSQDF-------IFKGHTGSVDQ 314
H S V +S DG A+G D S+ +F + + + +S D F H ++
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 89
Query: 315 LCWHASHPDLLSTASGDKSVRIWD--TRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNK 485
L +H L+S+A D ++ +D + K A + N+ +I++ P+G + G
Sbjct: 90 LDFHPRSTILISSAK-DNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTD 148
Query: 486 EDLVSFIDTKTYKVVTEEQF 545
+ D TY+ F
Sbjct: 149 HPIPHLYDVNTYQCFLPSNF 168
Score = 30.7 bits (66), Expect = 0.90
Identities = 27/126 (21%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSR--LSQDFIFKGHTGSVDQLCWHASHPDLL 347
V S+ + G L +G+ ++++ + L +F G +G+++Q+ + +S +
Sbjct: 131 VRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRY-SSTGSIY 189
Query: 348 STASGDKSVRIWDTRSHKCAATIPT---KGENINIAWSPNGNTIAVGNKEDLVSFIDTKT 518
TAS D ++R++D S KC +I K E + ++ + + K+ V + +
Sbjct: 190 ITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGS 249
Query: 519 YKVVTE 536
++V E
Sbjct: 250 GRMVKE 255
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 36.3 bits (80), Expect = 0.018
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 12/140 (8%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSR--LSQDF-------IFKGHTGSVDQ 314
H S V +S DG A+G D S+ +F + + + +S D F H ++
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEPIND 181
Query: 315 LCWHASHPDLLSTASGDKSVRIWD--TRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNK 485
L +H L+S+A D ++ +D + K A + N+ +I++ P+G + G
Sbjct: 182 LDFHPRSTILISSAK-DNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTD 240
Query: 486 EDLVSFIDTKTYKVVTEEQF 545
+ D TY+ F
Sbjct: 241 HPIPHLYDVNTYQCFLPSNF 260
Score = 30.7 bits (66), Expect = 0.90
Identities = 27/126 (21%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSR--LSQDFIFKGHTGSVDQLCWHASHPDLL 347
V S+ + G L +G+ ++++ + L +F G +G+++Q+ + +S +
Sbjct: 223 VRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRY-SSTGSIY 281
Query: 348 STASGDKSVRIWDTRSHKCAATIPT---KGENINIAWSPNGNTIAVGNKEDLVSFIDTKT 518
TAS D ++R++D S KC +I K E + ++ + + K+ V + +
Sbjct: 282 ITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGS 341
Query: 519 YKVVTE 536
++V E
Sbjct: 342 GRMVKE 347
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 36.3 bits (80), Expect = 0.018
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +3
Query: 162 HSSKVHSVGWSCD--GRKLASGSFDKSVAIFNL-ERSRLSQDFIFKGHTGSVDQLCWHAS 332
H V V W+ G LAS S+D V ++ +++ +QD +F H SV+ + W A
Sbjct: 55 HRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAW-AP 113
Query: 333 HPDLLSTASG--DKSVRIWDTRS 395
H LS A G D ++ ++ R+
Sbjct: 114 HDIGLSLACGSSDGNISVFTARA 136
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 36.3 bits (80), Expect = 0.018
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHA- 329
Y +H S + +V +C G ASG D ++ +++L + + H S+ L ++
Sbjct: 37 YPSHISPITTV--ACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSFYTP 94
Query: 330 ---SHPDLLSTASGDKSVRIWDT 389
S P L +A+ D SV I+DT
Sbjct: 95 SSLSFPRNLISAAADGSVAIFDT 117
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 35.9 bits (79), Expect = 0.024
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +3
Query: 162 HSSKVHSVGWS-CDGRKLASGSFDKSVAIFNLERSR-LSQDFIFKGHTGSVDQLCWHASH 335
H+S ++++ S +G L SG D S+ ++ + + + +GHT SV LC A
Sbjct: 258 HNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESV--LCL-AVV 314
Query: 336 PDLLSTASGDKSVRIW--DTRSHKCAATI 416
D+L + S DK+VR+W + + C A +
Sbjct: 315 SDILCSGSADKTVRLWKCSAKDYSCLAML 343
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGEN-IN-IAWSPNGNTIAVGNKEDLV 497
LL + S D++++IW T KC + ++ IN +A S NG+ I G+ + +
Sbjct: 179 LLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-IYTGSSDQRI 231
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKC 404
F GH V L W S LL ++S DK+VR+WD + C
Sbjct: 515 FTGHLDDVLDLSW--SRSQLLLSSSMDKTVRLWDIETQSC 552
Score = 35.1 bits (77), Expect = 0.042
Identities = 25/110 (22%), Positives = 47/110 (42%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS 332
+ H V + WS + L S S DK+V ++++E + F H V + ++
Sbjct: 515 FTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDIETQSCLKLF---AHNDYVTCVQFNPL 570
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGN 482
D + S D +RIW+ + + K + ++P+G VG+
Sbjct: 571 DEDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVCYTPDGQAAFVGS 620
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTR-SHKCAATIPTKGENIN-IAWSPNGN 464
GHT V + S+P+ + S D + R+WDTR + + T ++N + + P+G
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 465 TIAVGNKEDLVSFIDTKT 518
G+ + D +T
Sbjct: 262 RFGTGSDDGTCRLYDIRT 279
Score = 34.7 bits (76), Expect = 0.055
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 288 KGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDT-RSHKCAATIPTKGENINIAWSPNGN 464
+GHTG V L W ++S AS D + +W+ S K A + A+SPNG
Sbjct: 62 QGHTGKVYSLDWTPERNRIVS-ASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 465 TIAVGNKEDLVS 500
++A G + + S
Sbjct: 121 SVACGGLDSVCS 132
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFI-----FKGHTGSVDQLCWHASHP 338
V + +S +G+ +A G D +IF+L + + GH G V C + +
Sbjct: 110 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVS-CCQYVPNE 168
Query: 339 DL-LSTASGDKSVRIWD 386
D L T+SGD++ +WD
Sbjct: 169 DAHLITSSGDQTCILWD 185
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTR-SHKCAATIPTKGENIN-IAWSPNGN 464
GHT V + S+P+ + S D + R+WDTR + + T ++N + + P+G
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 199
Query: 465 TIAVGNKEDLVSFIDTKT 518
G+ + D +T
Sbjct: 200 RFGTGSDDGTCRLYDIRT 217
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFI-----FKGHTGSVDQLCWHASHP 338
V + +S +G+ +A G D +IF+L + + GH G V C + +
Sbjct: 48 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVS-CCQYVPNE 106
Query: 339 DL-LSTASGDKSVRIWD 386
D L T+SGD++ +WD
Sbjct: 107 DAHLITSSGDQTCILWD 123
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTR-SHKCAATIPTKGENIN-IAWSPNGN 464
GHT V + S+P+ + S D + R+WDTR + + T ++N + + P+G
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 465 TIAVGNKEDLVSFIDTKT 518
G+ + D +T
Sbjct: 262 RFGTGSDDGTCRLYDIRT 279
Score = 34.7 bits (76), Expect = 0.055
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 288 KGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDT-RSHKCAATIPTKGENINIAWSPNGN 464
+GHTG V L W ++S AS D + +W+ S K A + A+SPNG
Sbjct: 62 QGHTGKVYSLDWTPERNRIVS-ASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 465 TIAVGNKEDLVS 500
++A G + + S
Sbjct: 121 SVACGGLDSVCS 132
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFI-----FKGHTGSVDQLCWHASHP 338
V + +S +G+ +A G D +IF+L + + GH G V C + +
Sbjct: 110 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVS-CCQYVPNE 168
Query: 339 DL-LSTASGDKSVRIWD 386
D L T+SGD++ +WD
Sbjct: 169 DAHLITSSGDQTCILWD 185
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 35.9 bits (79), Expect = 0.024
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +3
Query: 168 SKVHSVGWSCDGRK-LASGSFDKSVAIFNLERSRLSQDFI-FKGHTGSVDQLCWHASHPD 341
SK+ V W+ R LAS +D V ++++ + FI + SVD + + P
Sbjct: 754 SKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVD---FSEACPT 810
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSP-NGNTIAVGNKE 488
L++ S D SV++W+ C TI + +SP + + +A G+ +
Sbjct: 811 KLASGSDDCSVKLWNINERNCLGTIRNIANVCCVQFSPQSSHLLAFGSSD 860
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 35.1 bits (77), Expect = 0.042
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 201 GRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQ-LCWHASHPDLLSTASGDKSVR 377
G L SGS DK++ +++L + L K H G+V LCW L ++S D +++
Sbjct: 322 GEVLYSGSVDKTIKVWDL--NTLQCRMTLKQHIGTVTSLLCW----DKCLISSSLDGTIK 375
Query: 378 IWDTRSHKCAATIPTKGENINI 443
+W ++ + T+ + +++
Sbjct: 376 LWACSENESLKVVQTRKQELSV 397
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGE 431
D L + SGD ++ IWD S +C +I + E
Sbjct: 200 DKLFSVSGDGTLLIWDCNSGQCVRSINLQAE 230
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and activator
of transcription interacting protein 1 (GI:15929722) {Mus
musculus}; similar to hypothetical protein GB:AAD43147
GI:5430747 from (Arabidopsis thaliana); contains Pfam
PF00400: WD domain, G-beta repeat (11 copies, 2 weak)
Length = 840
Score = 35.1 bits (77), Expect = 0.042
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERS---RLSQDFIFK--GHTGSVDQLCW 323
+HS V + +S D L S S D+ ++F+++R+ +S + K H + W
Sbjct: 645 SHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSW 704
Query: 324 HASHPDLLSTASGDKSVRIWDTRSH---KCAATIPTKGENIN-IAW-----SPNGNTIAV 476
+ +T+S DK+V+IW + K +P G ++ +AW + +AV
Sbjct: 705 NPFGHQF-ATSSRDKTVKIWSVENDARIKQILVLPPFGSSVTAVAWTGLDRNEKSGCVAV 763
Query: 477 GNKEDLVSFIDTKTYKVVTEE 539
G + L+ + K + TEE
Sbjct: 764 GMESGLIELSNVKI--IETEE 782
Score = 34.3 bits (75), Expect = 0.073
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 132 SHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLER-SRLSQDFIFKGHTGSV 308
SH + AH + + W+ G + A+ S DK+V I+++E +R+ Q + SV
Sbjct: 685 SHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSV 744
Query: 309 DQLCW 323
+ W
Sbjct: 745 TAVAW 749
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 34.7 bits (76), Expect = 0.055
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSH---KCAATIPTKGENINIAWSPNG 461
GHT +V + W SH LL++A D +V +W+ S+ K A + ++ WS G
Sbjct: 158 GHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQG 217
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +3
Query: 189 WSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDK 368
+S DG LASGS D SV +++ + + L + K + + +H P++++ S +
Sbjct: 394 FSPDGETLASGSSDGSVYMYDYKSTALIKK--LKAYEQPCVNVSYHPVLPNVVAACSWNG 451
Query: 369 SVRIWD 386
V +++
Sbjct: 452 QVSVFE 457
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 34.7 bits (76), Expect = 0.055
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 288 KGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKC 404
KGH ++ L W S LL ++S DK+VR+WD + C
Sbjct: 503 KGHLDAILDLSWSKSQ--LLLSSSMDKTVRLWDIETKTC 539
Score = 34.7 bits (76), Expect = 0.055
Identities = 27/136 (19%), Positives = 54/136 (39%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H + + WS + L S S DK+V ++++E + F H V + + +
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDIETKTCLKLF---AHNDYVTCIQFSPVDEN 560
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTY 521
+ S D +RIW + ++P+G +G+ + + DT+
Sbjct: 561 YFLSGSLDAKIRIWSIQDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYDTEDC 620
Query: 522 KVVTEEQFNFEVNEIS 569
K+ Q + + N+ S
Sbjct: 621 KLSQTNQIDVQSNKKS 636
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +3
Query: 60 KAMKDSKHSQAP--IEDLSELRSY--FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSF 227
K KD KH +A ++ +SY ++ + +E AH V ++ +S D LASG
Sbjct: 365 KKGKDHKHGKANEWVKVRPTGKSYKELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGA 424
Query: 228 DKSVAIFNLERSRL 269
D+ + ++ ++ L
Sbjct: 425 DRVIHVWEVQECEL 438
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 34.7 bits (76), Expect = 0.055
Identities = 29/123 (23%), Positives = 57/123 (46%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHP 338
AH+ + V + S S D + +++ E+ L IF+GH+ V Q+ ++
Sbjct: 97 AHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQ-IFEGHSHYVMQVTFNPKDT 155
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKT 518
+ ++AS D++++IW+ S T+ + +N + G+K L++ D T
Sbjct: 156 NTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCV-----DYFTGGDKPYLITGSDDHT 210
Query: 519 YKV 527
KV
Sbjct: 211 AKV 213
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.7 bits (76), Expect = 0.055
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Frame = +3
Query: 198 DGRKLASGSFDKSVAIFNLERSR--------LSQDFIF-------KGHTGSVDQLCWHAS 332
+GR L SG+ D S A+F+++R+ IF GH ++ W+
Sbjct: 55 EGRYLLSGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPI 114
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWS--PNGNTIAVGNKEDL 494
L T S D +++WDT + + G+ A S +T+ ED+
Sbjct: 115 DTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDV 170
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/92 (25%), Positives = 36/92 (39%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDT 389
+A+G+ D V + ++ S GH V + W S +L T D ++R WD
Sbjct: 163 IAAGTEDVQVRLCDIASGAFSHTL--SGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 390 RSHKCAATIPTKGENINIAWSPNGNTIAVGNK 485
R C + + P AVG+K
Sbjct: 221 RRAGCFRVLDQSQTQLGFR-PPILKRTAVGSK 251
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 34.3 bits (75), Expect = 0.073
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLST 353
V+ + WS D R + + D + ++N L GHT S + H +P + +
Sbjct: 547 VNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLT--GHTASTYVMDVHPFNPRIAMS 604
Query: 354 ASGDKSVRIWD 386
A D +WD
Sbjct: 605 AGYDGKTIVWD 615
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 33.9 bits (74), Expect = 0.096
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQ-LCWHASHP 338
HS +V ++ G+ L SGS DK++ +++L + L K HTG+V LCW
Sbjct: 257 HSGEVTC--FAVGGQMLYSGSVDKTIKMWDL--NTLQCIMTLKQHTGTVTSLLCW----D 308
Query: 339 DLLSTASGDKSVRIW 383
L ++S D ++++W
Sbjct: 309 KCLISSSLDGTIKVW 323
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIF----KGHTGSVDQLCWHASHPDLLSTASGDKSVR 377
L +G+ S+ ++ S F + +GH+G V C+ A +L + S DK+++
Sbjct: 225 LFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVT--CF-AVGGQMLYSGSVDKTIK 281
Query: 378 IWDTRSHKCAATI 416
+WD + +C T+
Sbjct: 282 MWDLNTLQCIMTL 294
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 33.9 bits (74), Expect = 0.096
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQD-FIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWD 386
+A+G D + +++ + S F F H+ + WH S L +AS D + +WD
Sbjct: 328 IAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWD 387
Query: 387 TRSHKCAATIPTKGENINIAWSPNGNTIAVGNKE 488
R+ + I T + + A G ++ G +
Sbjct: 388 LRTAWPLSVIDTHNDKVLSADWWKGESVVSGGAD 421
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHK 401
GHT V + W H D++ ++S D SVR WD + K
Sbjct: 270 GHTQCVSSVVW-PEH-DVIYSSSWDHSVRRWDVETGK 304
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 33.9 bits (74), Expect = 0.096
Identities = 26/90 (28%), Positives = 42/90 (46%)
Frame = +3
Query: 132 SHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVD 311
S N R++ A + V S+ S DG+ L + S + FN + Q F GH G V
Sbjct: 147 SGNLIRKFKASTKTVSSLCVSPDGKILVTAS--TQLKTFNCSDLKKIQKFT--GHPGVVR 202
Query: 312 QLCWHASHPDLLSTASGDKSVRIWDTRSHK 401
+ + +LS+A G++ + +W T K
Sbjct: 203 CVAFTEDGKYVLSSAVGERYIAVWKTDGAK 232
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 33.9 bits (74), Expect = 0.096
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 330 SHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGE 431
S D L TAS D++VRIWD S +C + GE
Sbjct: 154 SGSDKLYTASKDETVRIWDCASGQCTGVLNLGGE 187
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 33.9 bits (74), Expect = 0.096
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Frame = +3
Query: 198 DGRKLASGSFDKSVAIFNLERSR--------LSQDFIF-------KGHTGSVDQLCWHAS 332
+GR L SG+ D S A+F+++R+ IF GH ++ W+
Sbjct: 55 EGRYLLSGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHENGHKYAISSAIWYPI 114
Query: 333 HPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWS 452
+ T S D V++WDT + + G+ A S
Sbjct: 115 DTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMS 154
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDT 389
+A+G+ D V + ++ S GH V + W S +L T D ++R WD
Sbjct: 163 IAAGTDDVQVRLCDIASGAFSHTL--SGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Query: 390 RSHKC 404
R C
Sbjct: 221 RRAGC 225
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +3
Query: 141 TTREYIAHSSKVHSVGWSCDGRKLA-SGSFDKSVAIFNLERSRLSQDFIF---KGHTGSV 308
T +E+ H ++ + + + L +GS D + +++ R + + +F K HT V
Sbjct: 155 TVQEWKGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDI-RDSPADNRVFQNSKVHTMGV 213
Query: 309 DQLCWHASHPDLLSTASGDKSVRIWDTRS 395
+ + S P + T S D+++R+WDTRS
Sbjct: 214 CCISSNPSDPYSIFTGSYDETLRVWDTRS 242
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDL 344
SS + W + G D S ++ + S L +KGH + + ++P+L
Sbjct: 119 SSMCLCLDWDPSSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNL 178
Query: 345 LSTASGDKSVRIWDTR 392
+ T S D WD R
Sbjct: 179 VYTGSDDCKFSCWDIR 194
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGE-NINIAWSP 455
F GH V + W S L T + D WDT + + A +P N ++ W P
Sbjct: 259 FTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Score = 31.9 bits (69), Expect = 0.39
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDF-IFKGH----TGSVDQLCWHASHPDLLSTASGDKSV 374
LASG+ D + I++L + F + KG G + + W+ +L++ S + +
Sbjct: 138 LASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTT 197
Query: 375 RIWDTRSHKCAATI--PTKGENINIAWSPNGNT-IAVGNKED 491
IWD R K + + W+PN T I V + +D
Sbjct: 198 VIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDD 239
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGE-NINIAWSP 455
F GH V + W S L T + D WDT + + A +P N ++ W P
Sbjct: 259 FTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Score = 31.9 bits (69), Expect = 0.39
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDF-IFKGH----TGSVDQLCWHASHPDLLSTASGDKSV 374
LASG+ D + I++L + F + KG G + + W+ +L++ S + +
Sbjct: 138 LASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTT 197
Query: 375 RIWDTRSHKCAATI--PTKGENINIAWSPNGNT-IAVGNKED 491
IWD R K + + W+PN T I V + +D
Sbjct: 198 VIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDD 239
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKC 404
F+GH V L W S LLS+ S DK+VR+W+ S C
Sbjct: 509 FQGHVDDVLDLAWSKSQ-HLLSS-SMDKTVRLWNLSSQTC 546
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 144 TREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNL 254
T+E AH+ + S+ +S DG+ LAS D + I+ +
Sbjct: 406 TQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQV 442
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKC 404
F GH V L W S LLS+ S DK+VR+WD S C
Sbjct: 464 FVGHLDDVLDLSWSKSQ-HLLSS-SMDKTVRLWDLSSKTC 501
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 144 TREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIF--KGHTGSVDQL 317
++E AH + S+ +S DGR LAS D + I+ + S + + K GS++
Sbjct: 356 SQEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLF 415
Query: 318 CWHASHPDLLS 350
P+ +S
Sbjct: 416 LLANGSPEPVS 426
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V++V ++ DG L SGS D+ V +++ + + + F GH ++ Q + D
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSF-DSGHFNNIFQAKFMPFSDD 112
Query: 342 -LLSTASGDKSVR 377
+ T++ DK VR
Sbjct: 113 RTIVTSAADKQVR 125
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V + WS D L SGS D S I+++ + + Q I H V + W
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQ--ILDAHCHYVQGVAWDPL-AK 108
Query: 342 LLSTASGDKSVRIW 383
+++ S D++ RI+
Sbjct: 109 YVASLSSDRTCRIY 122
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V + WS D L SGS D S I+++ + + Q I H V + W
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQ--ILDAHCHYVQGVAWDPL-AK 167
Query: 342 LLSTASGDKSVRIW 383
+++ S D++ RI+
Sbjct: 168 YVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H V + WS D L SGS D S I+++ + + Q I H V + W
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQ--ILDAHCHYVQGVAWDPL-AK 167
Query: 342 LLSTASGDKSVRIW 383
+++ S D++ RI+
Sbjct: 168 YVASLSSDRTCRIY 181
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 32.7 bits (71), Expect = 0.22
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Frame = +3
Query: 153 YIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLER------SRLSQDFI-------FKG 293
Y H+ + ++ S DGR LA+G D V ++++ ++L + + F G
Sbjct: 202 YTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTG 261
Query: 294 HTGSVDQLCWHASHPDLLSTASGDKSVRIWD 386
H G V LC+ +L S S D ++ IW+
Sbjct: 262 HCGIVSSLCFREGTAELFS-GSYDGTLSIWN 291
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/93 (23%), Positives = 47/93 (50%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDT 389
LA+ + D + ++++ ++ ++F +GHT + LC+ ++S +S D S+RIWD
Sbjct: 530 LATVADDFVIRLYDVVTLKMVREF--RGHTDRITDLCFSEDGKWVIS-SSMDGSLRIWDV 586
Query: 390 RSHKCAATIPTKGENINIAWSPNGNTIAVGNKE 488
K + ++ SPN + +A + +
Sbjct: 587 ILAKQIDGVHVDVPITALSLSPNMDVLATAHSD 619
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
L SGS+DK++ ++ L S+ + + H +++ + A DLL T S D ++++W
Sbjct: 264 LYSGSWDKTLKVWRLSDSKCLESI--QAHDDAINTVA--AGFDDLLFTGSADGTLKVW 317
Score = 29.1 bits (62), Expect = 2.7
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +3
Query: 126 FASHNTTREYIAHSSKVHSVGWSCDGRKLASGSF-DKSVAIFNLERSRLSQDFIFKGHTG 302
F H + + SK + G+S G F KSV N R ++ + H
Sbjct: 191 FTGHQDGKIRVWRGSKRRTGGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIRHYD 250
Query: 303 SVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN 440
+V L + LL + S DK++++W KC +I + IN
Sbjct: 251 AVSCLSLN-EELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAIN 295
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 159 AHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSR 266
AH+ + SV +S DGR L S SFD S+ +++L + +
Sbjct: 371 AHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMK 406
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Frame = +3
Query: 288 KGHTGSVDQLCWHASHPDLLSTASGDKSVRIWD-------TRSHKCAATIPTKGENINIA 446
KGH + WH + + T+S D S+RIWD T+ K P + A
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 447 WSPNGNTIAVG 479
W +G IA G
Sbjct: 335 WDRDGKRIAGG 345
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 285 FKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATI 416
FKGH+ + + +S +L T S D + RIWD ++ KC I
Sbjct: 197 FKGHSDYLHTVVSRSSASQIL-TGSEDGTARIWDCKTGKCVKVI 239
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 351 TASGDKSVRIWDTRSHKCAATIPTKGENINIAWS-PNGNTIAVGNKEDLVSFIDTKTYKV 527
TA+GD WD S K T + ++ S + + I G+++ D KT K
Sbjct: 176 TAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKC 235
Query: 528 V 530
V
Sbjct: 236 V 236
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 327 ASHPDLLSTASGDKSVRIWDTRSHKCAATIPT-KGENINIAWSPNGNTIAVGNKED 491
+S L++ D S+RIWDT C + KG + ++ G+ +A G+K++
Sbjct: 73 SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDN 128
Score = 31.5 bits (68), Expect = 0.51
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 1/166 (0%)
Frame = +3
Query: 72 DSKHSQAPIEDLSELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFN 251
D+KH + D + Y S H V + S DG + +GS DK++ I+
Sbjct: 551 DAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWG 610
Query: 252 LERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGE 431
L+ + IF H SV + + + L + D+ V+ WD + T+
Sbjct: 611 LDFGDCHKS-IF-AHGDSVMGVKF-VRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHA 667
Query: 432 NI-NIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNFEVNEI 566
I +A S G+ + G+ + + D EE+ + E+
Sbjct: 668 EIWCLAISNRGDFLVTGSHDRSMRRWDRSEEPFFLEEEKEKRLEEL 713
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 276 DFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATI 416
+F GH G + L + + + S D SVRIWD S KC T+
Sbjct: 250 EFRLWGHEGPITSLALDMTS---IFSGSWDMSVRIWDRSSMKCVKTL 293
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 345 LSTASGDKSVRIWDTRSHKCAATIPTK-GENINIAWSPNGNTIAVGNKEDLVSFIDTKTY 521
L+T D +RI+D + K + + G + AWS +G + G ++DLV +
Sbjct: 318 LATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDR 377
Query: 522 KVV 530
KVV
Sbjct: 378 KVV 380
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 354 ASGDKS--VRIWDTRSHKCAATIPTKGENIN-IAWSPNGNTIAVGNKEDLVSFIDTKTYK 524
ASGD V+IWDTR C+ + I+ + ++ + + V + + +S + +T K
Sbjct: 52 ASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK 111
Query: 525 VVTEEQFN 548
V ++ +F+
Sbjct: 112 VQSQSEFS 119
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
LL +AS D+++++W KC +IP + +N S + G+ + V
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGSADGTV 271
Score = 30.7 bits (66), Expect = 0.90
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Frame = +3
Query: 132 SHNTTREYIAHSSKVHSVG------WSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKG 293
+ T EY +S +VG SC+G + ++++ + S + ++ G
Sbjct: 28 TQQTEEEYGIRNSSASAVGTGMYDRMSCEGSPMMMSPWNQATPFTQTQWSTVEENLPQNG 87
Query: 294 HTGSVDQLCWH----ASHPDLLSTASGDKSVRIW 383
GS+ + H A+ DLL T S K++R+W
Sbjct: 88 LIGSLVREEGHIYSLAATKDLLYTGSDSKNIRVW 121
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +3
Query: 201 GRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD--------LLSTA 356
G + SGS DK++ ++ + + + + GHTG V L A ++ +
Sbjct: 348 GSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSG 407
Query: 357 SGDKSVRIW 383
S DKSV++W
Sbjct: 408 SLDKSVKVW 416
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 31.9 bits (69), Expect = 0.39
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 156 IAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASH 335
I H V + + D L SGS+DK++ ++ L S+ + + H +V+ + +
Sbjct: 242 IRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLES--IEAHDDAVNTVV--SGF 297
Query: 336 PDLLSTASGDKSVRIW 383
DL+ T S D ++++W
Sbjct: 298 DDLVFTGSADGTLKVW 313
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKE 488
LL + S DK++++W KC +I + +N S + + G+ +
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLVFTGSAD 307
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 31.5 bits (68), Expect = 0.51
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Frame = +3
Query: 300 GSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGE--NINIAWSPNGNTIA 473
GSV L + LLS+ GD V +WD R+ KC +G ++ S NG A
Sbjct: 375 GSVRSLAFSEDGKHLLSSG-GDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFA 433
Query: 474 VGNKEDLVS------FIDTKTYKVVTEEQFNFEVNEISWNN 578
G +V+ F+ K + T + +++ + +N+
Sbjct: 434 SGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNH 474
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +3
Query: 201 GRKLASGSFDKSVAIFNLERSRLSQDF-IFKGHTGSVDQLCWHASHPD-----LLSTASG 362
G + SGS DKS+ ++ E + + F + GH G V C AS + +L +
Sbjct: 328 GEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVK--CLQASPNNVGAGFMLYSGGL 385
Query: 363 DKSVRIW 383
DKS+R+W
Sbjct: 386 DKSLRVW 392
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +3
Query: 249 NLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKG 428
N ++R + ++ H S+ L HA ++ + S DK++++W KC +I
Sbjct: 158 NYVQTRRNHKRLWIEHADSISCLAVHAG---IIYSGSWDKTLKVWRLSDLKCLESIKAHD 214
Query: 429 ENIN 440
+ IN
Sbjct: 215 DAIN 218
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 31.5 bits (68), Expect = 0.51
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 9/140 (6%)
Frame = +3
Query: 78 KHSQAPIEDLSELRSYFASHNTTREYIAHSSKVH----SVGWSCDGRKLASGSFDKSVAI 245
+H A +D +R Y+ S + Y +V SV WS D +++ SGS D +
Sbjct: 166 RHLAAACDD-GCVRIYYISESDKLTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRC 224
Query: 246 FNLER-SRLSQDFIFKGHTGSVDQLC-WHASHPDLLSTASGDK--SVRIWDTR-SHKCAA 410
++ + + + G G+ +LC W SGD SV+ WD++ A
Sbjct: 225 WDANLCHEVYRITVGLGGLGNGSELCIWSLLSLRYGVLVSGDSTGSVQFWDSQHGTLLQA 284
Query: 411 TIPTKGENINIAWSPNGNTI 470
KG+ +A SP+ N +
Sbjct: 285 HSNHKGDVNALAASPSHNRV 304
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +3
Query: 282 IFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINI 443
+F+ + + + +H + ++ TAS D S+R++D S C TI +K +++
Sbjct: 28 VFRDYNCRISSIDFHKTSTCMV-TASDDDSIRLYDVASATCLKTINSKKYGVDL 80
Score = 30.7 bits (66), Expect = 0.90
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Frame = +3
Query: 225 FDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKC 404
+D S+ + +L ++ + FKGH V L S + + S D++V +WD R KC
Sbjct: 98 WDDSLRLLSLHDNKYLR--YFKGHHDRVVSLSL-CSGGECFISGSLDRTVLLWDQRVEKC 154
Query: 405 AATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNF-----EVNEIS 569
+ +G A+ G A+ + D + Y+ E F+ E N +
Sbjct: 155 QGLLRVQGRPA-AAYDDQGLIFAIA-FGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVK 212
Query: 570 WNNTFGLVL 596
++N L+L
Sbjct: 213 FSNDGRLML 221
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +3
Query: 282 IFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINI 443
+F+ + + + +H + ++ TAS D S+R++D S C TI +K +++
Sbjct: 25 VFRDYNCRISSIDFHKTSTCMV-TASDDDSIRLYDVASATCLKTINSKKYGVDL 77
Score = 30.7 bits (66), Expect = 0.90
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Frame = +3
Query: 225 FDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKC 404
+D S+ + +L ++ + FKGH V L S + + S D++V +WD R KC
Sbjct: 95 WDDSLRLLSLHDNKYLR--YFKGHHDRVVSLSL-CSGGECFISGSLDRTVLLWDQRVEKC 151
Query: 405 AATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNF-----EVNEIS 569
+ +G A+ G A+ + D + Y+ E F+ E N +
Sbjct: 152 QGLLRVQGRPA-AAYDDQGLIFAIA-FGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVK 209
Query: 570 WNNTFGLVL 596
++N L+L
Sbjct: 210 FSNDGRLML 218
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 31.1 bits (67), Expect = 0.68
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 210 LASGSFDKSVAIFNLERSRLSQD-FIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWD 386
+A+G D + +++ + S F F H+ + WH S L +AS D + +WD
Sbjct: 328 IAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWD 387
Query: 387 TRS 395
R+
Sbjct: 388 LRT 390
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 291 GHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHK 401
GHT V + W H D++ ++S D SVR WD + K
Sbjct: 270 GHTQCVSSVVW-PEH-DVIYSSSWDHSVRRWDVETGK 304
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.68
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSR-LSQDFIFKGHTGSVDQLCWHASHPDLLS 350
V+ V WS DG V +++ + Q H G V+ + + + L
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCV 479
Query: 351 TASGD-KSVRIWD 386
T GD K++++WD
Sbjct: 480 TTCGDDKTIKVWD 492
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.68
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSR-LSQDFIFKGHTGSVDQLCWHASHPDLLS 350
V+ V WS DG V +++ + Q H G V+ + + + L
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCV 479
Query: 351 TASGD-KSVRIWD 386
T GD K++++WD
Sbjct: 480 TTCGDDKTIKVWD 492
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 30.7 bits (66), Expect = 0.90
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFD-KSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHP 338
+ ++ ++ WS GR LAS S+D S I+++ + + I +G G + L W +
Sbjct: 211 NDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTP--IRRG-LGGISMLKWSPT-G 266
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGEN--INIAWSPNGNTIAV 476
D A D + +W+T + + G W P G I +
Sbjct: 267 DYFFAARFDGTFCLWETNTWTSEPWSLSSGSGSVTGAIWDPEGRFILI 314
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 30.7 bits (66), Expect = 0.90
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 147 REYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWH 326
R Y H V+ + + +G D ++++ R+++ Q F+ H V +
Sbjct: 248 RSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDI-RTKM-QIFVLP-HDSDVFSVLAR 304
Query: 327 ASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENIN-IAWSPNGNTIAVGNKEDLVSF 503
+ P ++ T S D +++ WD R K ATI + + +A P N + +++ F
Sbjct: 305 PTDPQVI-TGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKF 363
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 105 LSELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFN 251
L +LRS A T + HS VHS +S G LA+ S D + + +
Sbjct: 375 LWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPSGLSLATTSLDNYIGVLS 423
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 342 LLSTASGDKSVRIWDTRSHKC 404
LL T GDK +R+W +S+KC
Sbjct: 130 LLLTGVGDKVMRLWSLKSYKC 150
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLST 353
V+ + WS D R + + D + ++N L GH+ S L H +P + +
Sbjct: 600 VNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVH--CLTGHSESSYVLDVHPFNPRIAMS 657
Query: 354 ASGDKSVRIWD 386
A D IWD
Sbjct: 658 AGYDGKTIIWD 668
>At1g17390.1 68414.m02122 hypothetical protein
Length = 272
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 363 DKSVRIWDTRSHKCAATIPTKGENINIAWSP 455
D+++ +W HK T T E IAWSP
Sbjct: 76 DRALDVWKAHVHKMGVTTRTAREERLIAWSP 106
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD 341
H + + S D R L SGS+DK+ ++ + R + H +V+ + +
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVES--VNAHEDAVNAVV--SGFDG 265
Query: 342 LLSTASGDKSVRIW 383
L+ T S D +V++W
Sbjct: 266 LVFTGSADGTVKVW 279
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 29.1 bits (62), Expect = 2.7
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +3
Query: 228 DKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS-HPD--LLSTASGDKSVRIWDTRSH 398
D V F++ER +L Q F + H+S PD L++ D + DT +
Sbjct: 257 DCGVRDFDMERYKLVQLFRYLWPVN-------HSSLSPDGKLVAVVGDDPDGLLVDTSNG 309
Query: 399 KCAATIPTKGE-NINIAWSPNGNTIAVGNKEDLVSFIDTK 515
+ T+ + + AW PNG T A GN++ DT+
Sbjct: 310 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTR 349
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 29.1 bits (62), Expect = 2.7
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +3
Query: 228 DKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHAS-HPD--LLSTASGDKSVRIWDTRSH 398
D V F++ER +L Q F + H+S PD L++ D + DT +
Sbjct: 251 DCGVRDFDMERYKLVQLFRYLWPVN-------HSSLSPDGKLVAVVGDDPDGLLVDTSNG 303
Query: 399 KCAATIPTKGE-NINIAWSPNGNTIAVGNKEDLVSFIDTK 515
+ T+ + + AW PNG T A GN++ DT+
Sbjct: 304 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTR 343
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 207 KLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQL-CWHASHPDLLSTASGDKSVRIW 383
+L SGS DK++ +++L+ + Q H+ V L CW L + S D +V+IW
Sbjct: 286 RLYSGSMDKTIKVWSLDNLQCIQ--TLTDHSSVVMSLICW----DQFLLSCSLDNTVKIW 339
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/115 (17%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERS-RLSQDFIFK----GHTGSVDQLCWHA 329
S+ V ++G+ DG A+ +K + IF E + +D + + +CW++
Sbjct: 484 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNS 543
Query: 330 SHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKED 491
+++++ + V++WD ++ + + + +I +S T+ +D
Sbjct: 544 YIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDD 598
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/115 (17%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLERS-RLSQDFIFK----GHTGSVDQLCWHA 329
S+ V ++G+ DG A+ +K + IF E + +D + + +CW++
Sbjct: 484 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNS 543
Query: 330 SHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENI-NIAWSPNGNTIAVGNKED 491
+++++ + V++WD ++ + + + +I +S T+ +D
Sbjct: 544 YIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDD 598
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSR-LSQDFIFKGHTGSVDQLCWHASHPDL-L 347
V+ V WS DG V +++ + Q H G V+ + + + L +
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCV 479
Query: 348 STASGDKSVRIWD 386
T DK++++WD
Sbjct: 480 ITCGDDKTIKVWD 492
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 174 VHSVGWSCDGRKLASGSFDKSVAIFNLERSR-LSQDFIFKGHTGSVDQLCWHASHPDL-L 347
V+ V WS DG V +++ + Q H G V+ + + + L +
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCV 479
Query: 348 STASGDKSVRIWD 386
T DK++++WD
Sbjct: 480 ITCGDDKTIKVWD 492
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 29.1 bits (62), Expect = 2.7
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Frame = +3
Query: 162 HSSKVHSVGWSCDGRKLASGS--FDKSVAIFN---LERSRLSQDFIFKGHTGSVDQLCWH 326
+ S + S+ +S DGR + S F V +F LE + Q F GH+ + +
Sbjct: 154 YCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCL-GHSEFITCTAF- 211
Query: 327 ASHPDL----LSTASGDKSVRIWDTRS 395
S P+L L + SGD +VR+WD S
Sbjct: 212 VSTPELTQGYLMSGSGDSTVRLWDITS 238
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 339 DLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKT 518
DLL+ + D + + + P K ++ W P+G IAVG ++ +S D +
Sbjct: 37 DLLAMVTEDSKILLHRFNWQRLWTISPGKPVT-SLCWRPDGKAIAVGLEDGTISLHDVEN 95
Query: 519 YKVV 530
K++
Sbjct: 96 GKLL 99
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Frame = +3
Query: 165 SSKVHSVGWSCDGRKLASGSFDKSVAIFNLER-SRLSQDFIFKGHTGSVDQLC-WHASHP 338
S + SV WS D +++ SGS D + ++ + + G GS ++C W
Sbjct: 198 SGRALSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSL 257
Query: 339 DLLSTASGDK--SVRIWDT-RSHKCAATIPTKGENINIAWSPNGNTI 470
SGD +V+ WD+ A KG+ +A +P+ N +
Sbjct: 258 RCSVLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRV 304
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 345 LSTASGDKSVRIWDTRSHKCAATIPTK-GENINIAWSPNGNTIAVGNKEDLVSFIDTKTY 521
L+T D +RI+D + K + G + +WS +G I G ++DLV +
Sbjct: 318 LATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWSMEDR 377
Query: 522 KVVT-EEQFNFEVNEISWNNTF 584
KVV E N V+ +++++ +
Sbjct: 378 KVVAWGEGHNSWVSGVAFDSNW 399
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 282 IFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
+F+GH+ V + + A D+L++ S D V +W
Sbjct: 197 LFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVW 230
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 282 IFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
+F+GH+ V + + A D+L++ S D V +W
Sbjct: 232 LFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVW 265
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 28.7 bits (61), Expect = 3.6
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 9/121 (7%)
Frame = +3
Query: 51 MITKAMKDSKHSQAPIEDLSELRSY--FASHNTTR--EYIAHSSKVHSVGWSCDGRKLAS 218
M TK K S + E L + Y F + T R + + +S V S+ + D +A+
Sbjct: 675 MSTKG-KSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAA 733
Query: 219 GSFDKSVAIFNL-----ERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
K + IF+ E + + + + +CW++ + L++ D V+IW
Sbjct: 734 AGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIW 793
Query: 384 D 386
D
Sbjct: 794 D 794
>At1g50360.1 68414.m05645 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif
Length = 1153
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/71 (22%), Positives = 28/71 (39%)
Frame = +3
Query: 402 CAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNFEVNEISWNNT 581
CA PT E +N+ + N + N + D + + V E V++ N
Sbjct: 348 CAGASPTLREKLNLTSAKQYNYLKQSNCYSINGVDDAERFHAVKEALDIVHVSKEDQENV 407
Query: 582 FGLVLPHQWIG 614
F ++ W+G
Sbjct: 408 FAMLAAVLWLG 418
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 234 SVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAAT 413
SV N R + ++ H+ +V L A LL +AS D++V++W KC +
Sbjct: 114 SVKPSNYVEVRRCRTALWIKHSDAVSCLSL-AEDQGLLYSASWDRTVKVWRIHDLKCIES 172
Query: 414 IPTKGENIN 440
I + +N
Sbjct: 173 IKAHDDAVN 181
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 12/78 (15%)
Frame = +3
Query: 201 GRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPD------------L 344
G+ L SG+ DK + ++ E + + GHTG V C P +
Sbjct: 276 GKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVK--CLAVVEPSGGEEEDGGDGRLV 333
Query: 345 LSTASGDKSVRIWDTRSH 398
L + S DKSV++W H
Sbjct: 334 LYSGSLDKSVKVWRVPRH 351
>At5g28350.2 68418.m03443 expressed protein
Length = 1087
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +3
Query: 411 TIPTKGENINIAWSPNGNTIAV-----GNKEDLVSFI-DTKTYKVVTEEQFNFEVNEISW 572
++ +GEN+ WSP+ IAV G + +F+ D+KT + + + ISW
Sbjct: 63 SVREEGENLQAVWSPDAKLIAVLVPFAGKDLSVSNFVRDSKTMLLGLSDG---SLYSISW 119
Query: 573 NNTFG 587
FG
Sbjct: 120 KGEFG 124
>At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3
WD-40 repeats (PF00400); similarity to WD-repeat protein
8 (WDR8)(SP:Q9P2S5] [HOMO SAPIENS]
Length = 458
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 441 IAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTE 536
++WSP G +A+G+ + ++ ++ T+K E
Sbjct: 228 VSWSPCGQFLAIGSYDQMLRVLNHLTWKTFAE 259
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 342 LLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLV 497
LL ++S D ++++W KC +I + IN S + + G+ + V
Sbjct: 249 LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFTGSADGTV 300
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Frame = +3
Query: 144 TREYI----AHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLE-RSRLSQDFIFKGHTGSV 308
TRE++ H + V + + +L SGSFD++V ++N+E ++ ++++ +G ++
Sbjct: 253 TREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAI 312
Query: 309 DQL 317
D L
Sbjct: 313 DAL 315
>At3g61480.1 68416.m06885 expressed protein
Length = 1091
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +3
Query: 423 KGENINIAWSPNGNTIAV-----GNKEDLVSFI-DTKTYKVVTEEQFNFEVNEISWNNTF 584
+GEN+ WSP+ IAV G + +F+ D+KT + + + ISW F
Sbjct: 61 EGENLQAVWSPDSKLIAVLVPFAGKDLSVSNFVRDSKTMLLGLSDG---SLYSISWKGEF 117
Query: 585 G 587
G
Sbjct: 118 G 118
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +3
Query: 375 RIWDTR--SHKCAATIP--TKGENINIAWSPNGNTIAVGNKEDLV 497
+IWD SH+ A I T +AWSP+GN I V + L+
Sbjct: 387 KIWDMSNCSHQFQALIAKETPISVTRVAWSPDGNFIGVAFTKHLI 431
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 234 SVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIW 383
S+ + N+ + S +F+GH+ V + + A LL++ S D V +W
Sbjct: 203 SIRVLNINTALRS---LFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVW 249
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,381,162
Number of Sequences: 28952
Number of extensions: 295266
Number of successful extensions: 1310
Number of sequences better than 10.0: 201
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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