Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0611
         (734 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IHP1 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_Q7KUI0 Cluster: CG33265-PA; n=1; Drosophila melanogaste...    36   1.4  

>UniRef50_Q8IHP1 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1429

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
 Frame = +2

Query: 101  RRQTKDNNVIKITSKSFKNSYECSIHRN*STISYFCKIFK-SNQKKFIQHK*KYILIERQ 277
            + + K+N +  I  K        + + N +   Y CKI + +N+KK  + K K ++++++
Sbjct: 805  KEKEKENKISNIKEKQTPKDNNANKNDNINKEYYKCKIKQMNNEKKNDEEKEKNVVLKKK 864

Query: 278  KNYRQFTRTSLRPENNWQETQQA 346
            K Y  F   +L P+NN  ++ ++
Sbjct: 865  KKYNTF---NLFPKNNKNDSNES 884


>UniRef50_Q7KUI0 Cluster: CG33265-PA; n=1; Drosophila
            melanogaster|Rep: CG33265-PA - Drosophila melanogaster
            (Fruit fly)
          Length = 1799

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +2

Query: 575  SSNLRPWTSTSLMPPLTLSHIIQWLPHPLN 664
            SS+  P T+TS +PPL+ S   Q+LPHP N
Sbjct: 1609 SSSSSPETTTSSLPPLSCSTGYQYLPHPTN 1638


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,504,764
Number of Sequences: 1657284
Number of extensions: 12861185
Number of successful extensions: 27751
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27733
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)