Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0610
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    25   0.57 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    25   0.57 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   0.76 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   0.76 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   0.76 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   0.76 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.0  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   7.0  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 374 GLSIVTTVAPPFKRIAASRQK*MGWWYLP 288
           G  I    + P ++IA +  +   WWYLP
Sbjct: 252 GTMIKCLKSRPARQIALTVPRYQAWWYLP 280


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 374 GLSIVTTVAPPFKRIAASRQK*MGWWYLP 288
           G  I    + P ++IA +  +   WWYLP
Sbjct: 252 GTMIKCLKSRPARQIALTVPRYQAWWYLP 280


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 102 QNLIFILS*YLAMILRSVFCFHSFFLMGNPFWK*YFTI 215
           QN +F+LS +   I +  +C+ S F   N     YFT+
Sbjct: 235 QNFLFVLSTFSICITQFYYCYDSGFNSDN-LTDVYFTL 271


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 344 PFKRIAASRQK*MGWWYLP 288
           P ++IA +  +   WWYLP
Sbjct: 262 PARQIALTVPRYQAWWYLP 280


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 344 PFKRIAASRQK*MGWWYLP 288
           P ++IA +  +   WWYLP
Sbjct: 262 PARQIALTVPRYQAWWYLP 280


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 344 PFKRIAASRQK*MGWWYLP 288
           P ++IA +  +   WWYLP
Sbjct: 262 PARQIALTVPRYQAWWYLP 280


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/28 (28%), Positives = 12/28 (42%)
 Frame = +3

Query: 324 SSNAFEGWGDRCNYTETFEFLSKGGWHI 407
           +S  + G      Y E  E   +GGW +
Sbjct: 286 NSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/20 (40%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
 Frame = +3

Query: 372 TFEFLSKG---GWHIYVVDV 422
           +F+  + G   GWH Y+ DV
Sbjct: 145 SFDLFANGITFGWHTYIFDV 164


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 270 PLVSPHG*VPPP 305
           P V PH  VPPP
Sbjct: 12  PTVLPHQEVPPP 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,169
Number of Sequences: 336
Number of extensions: 3003
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)