Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0610
         (547 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g55180.1 68416.m06129 esterase/lipase/thioesterase family pro...    27   6.2  

>At3g55180.1 68416.m06129 esterase/lipase/thioesterase family
           protein low similarity to monoglyceride lipase from
           [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162;
           contains Interpro entry IPR000379
          Length = 312

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -2

Query: 468 TSSLPTWC*VVTGVHRHLQRKCATHL*IEIQRSQYSYNGRPTLQT 334
           T  +PTW  V +     +  K  TH+  +++ ++Y Y GRP L+T
Sbjct: 161 TRFIPTWKIVPSNDIIDVAFK-ETHIRKQVRDNEYCYKGRPRLKT 204


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,599,624
Number of Sequences: 28952
Number of extensions: 239622
Number of successful extensions: 391
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)