Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0609
         (514 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   3.5  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    23   4.6  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    23   4.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.1  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 390 FPNYSNTSPSLHFTYI*MNCCSLVSLKLEGGP 485
           F ++SNTS +L       N C     + +GGP
Sbjct: 234 FGDFSNTSSALKLASAIANACDTSLPRRKGGP 265


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 284 SFAWRNIKKKEDKNRLKSSE 225
           +F  RNIK K  + R KSSE
Sbjct: 3   AFVKRNIKNKGARKRQKSSE 22


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 284 SFAWRNIKKKEDKNRLKSSE 225
           +F  RNIK K  + R KSSE
Sbjct: 3   AFVKRNIKNKGARKRQKSSE 22


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 AMHRPLNPEGATGTNFSN 132
           A+  PLNP GA GT  S+
Sbjct: 344 AIPLPLNPTGAAGTTNSS 361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,859
Number of Sequences: 2352
Number of extensions: 9847
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)