BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0609
(514 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015247-1|AAT94476.1| 1037|Drosophila melanogaster LP19917p pro... 30 1.6
AE014134-482|AAF51201.1| 1475|Drosophila melanogaster CG3131-PA ... 30 1.6
>BT015247-1|AAT94476.1| 1037|Drosophila melanogaster LP19917p
protein.
Length = 1037
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +2
Query: 368 FIVILIIISKLFEHFTFTSLHIYINELLFVSLAKTRGGA 484
++V +++ + F H++F + H + ++ V +A TRG A
Sbjct: 537 YVVTIVLFVERFIHYSFMAEHTDLRHIMGVGIAITRGSA 575
>AE014134-482|AAF51201.1| 1475|Drosophila melanogaster CG3131-PA
protein.
Length = 1475
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +2
Query: 368 FIVILIIISKLFEHFTFTSLHIYINELLFVSLAKTRGGA 484
++V +++ + F H++F + H + ++ V +A TRG A
Sbjct: 975 YVVTIVLFVERFIHYSFMAEHTDLRHIMGVGIAITRGSA 1013
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,928,609
Number of Sequences: 53049
Number of extensions: 436936
Number of successful extensions: 773
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -