Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0609
(514 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 25 0.35
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 25 0.35
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 25 0.46
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 24 1.1
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 1.9
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 3.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 3.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.9
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 25.4 bits (53), Expect = 0.35
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 148 VPIFLMKYVLNKMFTIGSHG 89
VP+FLM+ L +M TIG G
Sbjct: 70 VPMFLMELSLGQMMTIGGLG 89
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 25.4 bits (53), Expect = 0.35
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 148 VPIFLMKYVLNKMFTIGSHG 89
VP+FLM+ L +M TIG G
Sbjct: 123 VPMFLMELSLGQMMTIGGLG 142
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.46
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 196 VPILRCIGPSIPKARRVP 143
VP RCIGP P R +P
Sbjct: 145 VPRFRCIGPPTPFPRFIP 162
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 23.8 bits (49), Expect = 1.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 148 VPIFLMKYVLNKMFTIGSHG 89
+P+F M+ L +M T+G G
Sbjct: 32 IPMFFMELALGQMLTVGGLG 51
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 138 KIGTRRAFGIEGPMHRKIGTNAPDV 212
++G R+ F + P HRKI D+
Sbjct: 75 QLGRRQPFSLFIPAHRKIAARLIDI 99
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 239 ICFYLLFFLCFARRTSRNLVLPSVSAMLF 325
+C+ F + R RN + P+V ++LF
Sbjct: 20 LCWLPFFTMYLVRAFCRNCIHPTVFSVLF 48
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 239 ICFYLLFFLCFARRTSRNLVLPSVSAMLF 325
+C+ F + R RN + P+V ++LF
Sbjct: 468 LCWLPFFTMYLVRAFCRNCIHPTVFSVLF 496
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 263 LCFARRTSRNLVLPSVSAMLFL 328
L F RT V+PS MLFL
Sbjct: 279 LIFHHRTPDRYVMPSWIKMLFL 300
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 263 LCFARRTSRNLVLPSVSAMLFL 328
L F RT V+PS MLFL
Sbjct: 279 LIFHHRTPDRYVMPSWIKMLFL 300
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 263 LCFARRTSRNLVLPSVSAMLFL 328
L F RT V+PS MLFL
Sbjct: 279 LIFHHRTPDRYVMPSWIKMLFL 300
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 263 LCFARRTSRNLVLPSVSAMLFL 328
L F RT V+PS MLFL
Sbjct: 279 LIFHHRTPDRYVMPSWIKMLFL 300
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 263 LCFARRTSRNLVLPSVSAMLFL 328
L F RT V+PS MLFL
Sbjct: 279 LIFHHRTPDRYVMPSWIKMLFL 300
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 263 LCFARRTSRNLVLPSVSAMLFL 328
L F RT V+PS MLFL
Sbjct: 279 LIFHHRTPDRYVMPSWIKMLFL 300
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 9.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 263 LCFARRTSRNLVLPSVSAMLFL 328
L F RT V+PS MLFL
Sbjct: 347 LNFHHRTPDRYVMPSWIKMLFL 368
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 9.9
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 263 LCFARRTSRNLVLPSVSAMLFL 328
L F RT V+PS MLFL
Sbjct: 347 LNFHHRTPDRYVMPSWIKMLFL 368
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,122
Number of Sequences: 438
Number of extensions: 2963
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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