Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0608
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   5.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.3  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   7.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 378 FFTSLKTGTNQTTKELTDGS 319
           F  SLK GTN  T+  T+ S
Sbjct: 529 FAVSLKQGTNTITRHSTESS 548


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 474  FLSGGTGVRHNPVRYRT 424
            + SGG GVR  P+  +T
Sbjct: 1180 YTSGGDGVRTTPIHCQT 1196


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 285 VLRVERNCWNFCFRQLVLLSSGS 353
           VL + +NC ++CF    L S  +
Sbjct: 276 VLSIVKNCLSYCFNLYHLASKSN 298


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 285 VLRVERNCWNFCFRQLVLLSSGS 353
           VL + +NC ++CF    L S  +
Sbjct: 276 VLSIVKNCLSYCFNLYHLASKSN 298


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 47  TILQIEN*VSLHSRAPSYTRT 109
           T+L+IE+ V L ++  S TRT
Sbjct: 398 TVLEIEDWVLLKNKVTSDTRT 418


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 562 AEFFFLLFQGVVSYEEF 512
           A F F+  QG+VS EE+
Sbjct: 6   ALFAFICIQGLVSAEEY 22


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 309 WNFCFRQLVLLSSGSCPSLRK*KK 380
           W +C R     SSG  P  R+ KK
Sbjct: 193 WVYCTRYSDRPSSGRSPRTRRVKK 216


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 430 PDRVSVNGFTRVK 392
           PD + VNGF R K
Sbjct: 243 PDTILVNGFGRFK 255


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 351 SCPSLRK*KKYCLF 392
           SC  ++K K+YC +
Sbjct: 103 SCAKIKKTKRYCYY 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,850
Number of Sequences: 336
Number of extensions: 2378
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)