Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0608
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.2  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    22   4.8  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.5  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   8.5  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   8.5  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 378 KYCLFLTLVNPFTDTRSGNEPGYV 449
           +YCLF   VN  + T +  EPG +
Sbjct: 530 RYCLFGNTVNLTSRTETTGEPGKI 553


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 378 KYCLFLTLVNPFTDTRSGNEPGYV 449
           +YCLF   VN  + T +  EPG +
Sbjct: 530 RYCLFGNTVNLTSRTETTGEPGKI 553


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 411 MDSQELKKGSTFFTSLKTGTNQTTKELTDG 322
           M  +ELKK       + +  N T KEL DG
Sbjct: 1   MTIEELKKTIKNLRKVCSKKNDTPKELLDG 30


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +2

Query: 215 WSPIITFSRASPVYPQP 265
           W P     R S +YP P
Sbjct: 397 WIPAFAIHRDSAIYPNP 413


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 121 PDPFDETTRLPLAL 162
           PDP DET + P  L
Sbjct: 184 PDPHDETAKKPRVL 197


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 474  FLSGGTGVRHNPVRYRT 424
            F SGG GV+  P+  +T
Sbjct: 1159 FTSGGDGVKSAPIHCQT 1175


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 421 VSVNGFTRVKKRQYFFYFLKDGHEPDDKRT 332
           VSV G    +   + FY    G  PD K+T
Sbjct: 181 VSVQGIIIYRAAYFGFYDTARGMLPDPKKT 210


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 421 VSVNGFTRVKKRQYFFYFLKDGHEPDDKRT 332
           VSV G    +   + FY    G  PD K+T
Sbjct: 181 VSVQGIIIYRAAYFGFYDTARGMLPDPKKT 210


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,062
Number of Sequences: 438
Number of extensions: 2920
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)