Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0607
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 38 0.009
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 38 0.009
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 38 0.009
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 38 0.009
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 38 0.009
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 38 0.009
SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 36 0.038
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 34 0.087
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 33 0.20
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 33 0.20
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 30 1.4
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 30 1.4
SB_29084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20) 29 3.3
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_10487| Best HMM Match : FGF (HMM E-Value=1.4e-06) 29 4.3
SB_7849| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_21873| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_12797| Best HMM Match : HECT (HMM E-Value=0) 28 5.7
SB_34783| Best HMM Match : Gam (HMM E-Value=0.24) 28 7.6
SB_21510| Best HMM Match : zf-C2H2 (HMM E-Value=6.3e-07) 28 7.6
SB_7769| Best HMM Match : Histone (HMM E-Value=0.2) 28 7.6
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3
Query: 588 IRPIVSRITIHWAVVLQRRDW 650
IRPIVSRITIHW +RRDW
Sbjct: 18 IRPIVSRITIHWPSFYKRRDW 38
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 12 PVNCNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 68 PVNCNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 636 PVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 47 PVNCNTTHYRANW 59
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 9 PVNCNTTHYRANW 21
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 49 PVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 1887 PVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 47 PVNCNTTHYRANW 59
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 9 PVNCNTTHYRANW 21
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 41 PVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 90 PVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 68 PVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 79 PVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 55 PVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 623 PVNCNTTHYRANW 585
PVNCNTTHYRANW
Sbjct: 79 PVNCNTTHYRANW 91
>SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 600 VSRITIHWAVVLQRRDW 650
+SRITIHW VLQRRDW
Sbjct: 277 LSRITIHWPSVLQRRDW 293
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3
Query: 564 TRGGARYPIRPIVSRITIHW 623
T GGA PIRPIVSRITIHW
Sbjct: 34 TDGGA--PIRPIVSRITIHW 51
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 34.3 bits (75), Expect = 0.087
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 201 PEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKW 371
PE L H E GC C ++ + ++ LE W LTA+FD DG W
Sbjct: 165 PENARLNSHCTETSRGGC--CVFPFIYKDKSYTECTTEDSLEPWCALTANFDVDGMW 219
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 564 TRGGARYPIRPIVSRITIHW 623
T GGA PIRPIVS ITIHW
Sbjct: 36 TVGGA--PIRPIVSHITIHW 53
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 623 PVNCNTTHYRAN 588
PVNCNTTHYRAN
Sbjct: 86 PVNCNTTHYRAN 97
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 623 PVNCNTTHYRAN 588
PVNCNTTHYRAN
Sbjct: 29 PVNCNTTHYRAN 40
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 93 DKYTDKYDKINLQEILENKRLLESYVDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEA 272
++ K +++N I + KR E GKG T +GK + +EA+E G E C +
Sbjct: 113 ERVNKKKERLNKGSIEQGKRATEQ------GKG-ATEQGKGATEQGKEAIEQGKEACEQE 165
Query: 273 QEK 281
+E+
Sbjct: 166 RER 168
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = +3
Query: 96 KYTDKYDKINLQEIL---ENKRLLESYVDCVLGKGKCTPEGKELKDHLQEALETGCEKCT 266
K D + KI+ Q I ENK L + D K K E KE+K L+EA
Sbjct: 1377 KIEDDHKKIHQQNIERDHENKMLSKRVADLTALKEKFEHEKKEMKQSLREA--------- 1427
Query: 267 EAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
+ +E E +Y +K ++ + ++L + R+K+
Sbjct: 1428 QGRESDLEVRYEYEVKEKVALQQQLDDTTNRSNADREKF 1466
>SB_29084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 567 RGGARYPIRPIVSRITIHWAVVLQRRDW 650
RGG P+ ++ AVVLQRRDW
Sbjct: 43 RGGIGDPLESTCRHASLALAVVLQRRDW 70
>SB_7412| Best HMM Match : IRK (HMM E-Value=2.2e-20)
Length = 610
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 132 EILENKRLLESYVDCVLGKGKCTPEGKELKDHLQEALETGCEKCTEAQEK 281
+I +L+ES++ V+ + CT EGKE+ Q+ L + E +EK
Sbjct: 390 DIRTKSQLIESHMRAVVVRRHCTKEGKEI-GFFQQGLPLRHDLICEEEEK 438
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 588 IRPIVSRITIHW 623
+RP+VSRITIHW
Sbjct: 33 LRPVVSRITIHW 44
>SB_10487| Best HMM Match : FGF (HMM E-Value=1.4e-06)
Length = 617
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 192 KCTPEGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDG 365
K TP G+ LKD Q ++ KCT + + + + L K L I+ H G
Sbjct: 329 KSTPSGRYLKDFRQSTDQSRRPKCTRVKTTTSGSEM-RLTKRHLHIYDACPTHIGGSG 385
>SB_7849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 600 VSRITIHWAVVLQRRDW 650
+SRIT AVVLQRRDW
Sbjct: 88 LSRITNSLAVVLQRRDW 104
>SB_21873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 126 LQEILENKRLLESYVDCVLGKG-KCTPEGKEL--KDHLQEALETGCE 257
+QEI+ + +L+E DC+L + + PEG +L + ++ +A+ C+
Sbjct: 229 MQEIISSSQLMEYLGDCILAQAPERLPEGAQLNYEQNMHDAIGIMCK 275
>SB_12797| Best HMM Match : HECT (HMM E-Value=0)
Length = 749
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 174 CVLGKGKCTPEGKELKDHLQEALETGCEKCTE 269
CVL + K PE L +H +E+L + + C +
Sbjct: 118 CVLNQPKSKPENSHLNNHAEESLLSTLKTCRD 149
>SB_34783| Best HMM Match : Gam (HMM E-Value=0.24)
Length = 347
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +3
Query: 123 NLQEILEN-KRLLESYVDC---VLGKGKCTPEGKELKDHLQEALETGCEKCTEAQ 275
N Q+ LE+ +++LE ++ V+ + E + L+D +EA TGC KC+ A+
Sbjct: 122 NSQKRLESHEKVLEEHLKEMLEVIAHMQMREEKRYLRDMSREAATTGCVKCSSAR 176
>SB_21510| Best HMM Match : zf-C2H2 (HMM E-Value=6.3e-07)
Length = 229
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = +3
Query: 189 GKCTPEGKELKDHLQEALET--GCEKCTEAQEKGAETSIDYLI 311
GKC E LKDH+ E C +C + K I LI
Sbjct: 43 GKCFTEAARLKDHILHTGEKPYQCSQCGKCSAKSGNHKIHVLI 85
>SB_7769| Best HMM Match : Histone (HMM E-Value=0.2)
Length = 150
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 567 RGGARYPIRPIVSRITIHWAVVLQRRDW 650
+GG P+ ++ AVVLQRRDW
Sbjct: 51 QGGVGDPLESTCRHASLALAVVLQRRDW 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,673,459
Number of Sequences: 59808
Number of extensions: 327784
Number of successful extensions: 3901
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3900
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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