Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0607
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical pr... 31 0.94
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 28 6.6
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 28 6.6
AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical ... 28 6.6
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 8.7
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 8.7
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 8.7
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 27 8.7
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 27 8.7
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 8.7
>Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical
protein T23G4.3 protein.
Length = 485
Score = 30.7 bits (66), Expect = 0.94
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 159 ESYVDCVLGKGKCTPEG-KELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWK 335
+S DC G + TPE KEL+ L + + K +EA K ET KN ++
Sbjct: 74 DSSSDCTEG-AEATPEQWKELEKELDKVV--AFMKDSEAA-KATETDPVKRYKNLCQLSM 129
Query: 336 ELTAHFDPDGKWRKKYEDRAKAKGIVIPE*NFN 434
L DG W+ ++ R +A+ + I NF+
Sbjct: 130 TLKIMSPRDGGWKILHDKRTEAEQLAIDRANFD 162
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 117 CHICQCTYHQQVRPRVHSS 61
C +CQ TY Q PR+H S
Sbjct: 91 CGVCQLTYSSQRIPRIHPS 109
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/37 (29%), Positives = 14/37 (37%)
Frame = -1
Query: 192 CPCRARNPHTTPGASCSPKFLAS*FCHICQCTYHQQV 82
C CR + + C P F C CQC H +
Sbjct: 864 CVCREKGIYGRQCNQCQPGFWGFPECRTCQCNDHANI 900
>AF000264-4|AAC71125.3| 631|Caenorhabditis elegans Hypothetical
protein F43E2.3 protein.
Length = 631
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +3
Query: 177 VLGKGKCTPEGKE-----LKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNE 320
++ K C GK+ +HL G E C EA +KG +S+ ++KN+
Sbjct: 331 IISKNLCESNGKDRLTPICLEHLIHICLFGDELCIEAIQKGCISSVIRIMKND 383
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 384 EDRAKA 401
+ +A
Sbjct: 3448 DAELQA 3453
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 384 EDRAKA 401
+ +A
Sbjct: 3448 DAELQA 3453
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 2845 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 2902
Query: 384 EDRAKA 401
+ +A
Sbjct: 2903 DAELQA 2908
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 384 EDRAKA 401
+ +A
Sbjct: 3448 DAELQA 3453
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 384 EDRAKA 401
+ +A
Sbjct: 3448 DAELQA 3453
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 2845 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 2902
Query: 384 EDRAKA 401
+ +A
Sbjct: 2903 DAELQA 2908
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +1
Query: 220 KIIFKKL*RLVARNALKPKKRALKLVLII*SRMNWKFGRS*QPISTPTANGGRSTKTALR 399
K+++KK RL A+NA KPK ++ +I +N F + I +G ++A++
Sbjct: 1111 KVLYKKSSRLEAKNADKPK----RVYEVIKPVINDDFDKQMDEIRKQMKSGSNQLQSAIK 1166
Query: 400 PRASSSLNKT 429
+ L+ T
Sbjct: 1167 DLSKGILSAT 1176
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 384 EDRAKA 401
+ +A
Sbjct: 3448 DAELQA 3453
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 384 EDRAKA 401
+ +A
Sbjct: 3448 DAELQA 3453
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 2845 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 2902
Query: 384 EDRAKA 401
+ +A
Sbjct: 2903 DAELQA 2908
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 384 EDRAKA 401
+ +A
Sbjct: 3448 DAELQA 3453
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +3
Query: 204 EGKELKDHLQEALETGCEKCTEAQEKGAETSIDYLIKNELEIWKELTAHFDPDGKWRKKY 383
EG E + + + ++ G E E A+ + ++ L + ++LT+ FD KW +
Sbjct: 3390 EGNEANEKISDTVDEGKELVEEVMALCADRT--ETLERALALMEQLTSQFDELNKWLDQM 3447
Query: 384 EDRAKA 401
+ +A
Sbjct: 3448 DAELQA 3453
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,074,323
Number of Sequences: 27780
Number of extensions: 241401
Number of successful extensions: 809
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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