Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0604
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58010-1|AAB04126.1| 678|Homo sapiens oviductal glycoprotein pr... 33 1.1
U09550-1|AAA86946.1| 678|Homo sapiens oviductal glycoprotein pr... 33 1.1
BC126177-1|AAI26178.1| 678|Homo sapiens oviductal glycoprotein ... 33 1.1
AY189737-1|AAO37816.1| 678|Homo sapiens oviductin protein. 33 1.1
AL390195-3|CAC36039.1| 678|Homo sapiens oviductal glycoprotein ... 33 1.1
Y08374-1|CAA69661.1| 383|Homo sapiens GP-39 cartilage protein p... 32 2.0
M80927-1|AAA16074.1| 383|Homo sapiens glycoprotein protein. 32 2.0
BT007223-1|AAP35887.1| 383|Homo sapiens chitinase 3-like 1 (car... 32 2.0
BC039132-1|AAH39132.1| 383|Homo sapiens chitinase 3-like 1 (car... 32 2.0
BC038354-1|AAH38354.1| 383|Homo sapiens chitinase 3-like 1 (car... 32 2.0
BC008568-1|AAH08568.1| 383|Homo sapiens chitinase 3-like 1 (car... 32 2.0
S80876-1|AAB50683.1| 516|Homo sapiens hIk1 protein. 30 6.1
AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down synd... 30 8.1
AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhe... 30 8.1
AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhe... 30 8.1
AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhe... 30 8.1
AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhe... 30 8.1
>U58010-1|AAB04126.1| 678|Homo sapiens oviductal glycoprotein
protein.
Length = 678
Score = 32.7 bits (71), Expect = 1.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFF--FFTDKTKRDRFVASV 574
+ + +LK+ N LK L SIGGW F + R++F+ASV
Sbjct: 78 YPEFNKLKERNRELKTLLSIGGWNFGTSRFTTMLSTFANREKFIASV 124
>U09550-1|AAA86946.1| 678|Homo sapiens oviductal glycoprotein
protein.
Length = 678
Score = 32.7 bits (71), Expect = 1.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFF--FFTDKTKRDRFVASV 574
+ + +LK+ N LK L SIGGW F + R++F+ASV
Sbjct: 78 YPEFNKLKERNRELKTLLSIGGWNFGTSRFTTMLSTFANREKFIASV 124
>BC126177-1|AAI26178.1| 678|Homo sapiens oviductal glycoprotein 1,
120kDa (mucin 9, oviductin) protein.
Length = 678
Score = 32.7 bits (71), Expect = 1.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFF--FFTDKTKRDRFVASV 574
+ + +LK+ N LK L SIGGW F + R++F+ASV
Sbjct: 78 YPEFNKLKERNRELKTLLSIGGWNFGTSRFTTMLSTFANREKFIASV 124
>AY189737-1|AAO37816.1| 678|Homo sapiens oviductin protein.
Length = 678
Score = 32.7 bits (71), Expect = 1.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFF--FFTDKTKRDRFVASV 574
+ + +LK+ N LK L SIGGW F + R++F+ASV
Sbjct: 78 YPEFNKLKERNRELKTLLSIGGWNFGTSRFTTMLSTFANREKFIASV 124
>AL390195-3|CAC36039.1| 678|Homo sapiens oviductal glycoprotein 1,
120kDa (mucin 9, oviductin) protein.
Length = 678
Score = 32.7 bits (71), Expect = 1.1
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFF--FFTDKTKRDRFVASV 574
+ + +LK+ N LK L SIGGW F + R++F+ASV
Sbjct: 78 YPEFNKLKERNRELKTLLSIGGWNFGTSRFTTMLSTFANREKFIASV 124
>Y08374-1|CAA69661.1| 383|Homo sapiens GP-39 cartilage protein
protein.
Length = 383
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFFFFTDKTKRDRFVASVKRLPPNL 595
+G L LK N LK L S+GGW F + R +K +PP L
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSR-RTFIKSVPPFL 127
>M80927-1|AAA16074.1| 383|Homo sapiens glycoprotein protein.
Length = 383
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFFFFTDKTKRDRFVASVKRLPPNL 595
+G L LK N LK L S+GGW F + R +K +PP L
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSR-RTFIKSVPPFL 127
>BT007223-1|AAP35887.1| 383|Homo sapiens chitinase 3-like 1
(cartilage glycoprotein-39) protein.
Length = 383
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFFFFTDKTKRDRFVASVKRLPPNL 595
+G L LK N LK L S+GGW F + R +K +PP L
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSR-RTFIKSVPPFL 127
>BC039132-1|AAH39132.1| 383|Homo sapiens chitinase 3-like 1
(cartilage glycoprotein-39) protein.
Length = 383
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFFFFTDKTKRDRFVASVKRLPPNL 595
+G L LK N LK L S+GGW F + R +K +PP L
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSR-RTFIKSVPPFL 127
>BC038354-1|AAH38354.1| 383|Homo sapiens chitinase 3-like 1
(cartilage glycoprotein-39) protein.
Length = 383
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFFFFTDKTKRDRFVASVKRLPPNL 595
+G L LK N LK L S+GGW F + R +K +PP L
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSR-RTFIKSVPPFL 127
>BC008568-1|AAH08568.1| 383|Homo sapiens chitinase 3-like 1
(cartilage glycoprotein-39) protein.
Length = 383
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 440 FGQLMQLKQANTGLKVLPSIGGWTLADPFFFFTDKTKRDRFVASVKRLPPNL 595
+G L LK N LK L S+GGW F + R +K +PP L
Sbjct: 77 YGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSR-RTFIKSVPPFL 127
>S80876-1|AAB50683.1| 516|Homo sapiens hIk1 protein.
Length = 516
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = -1
Query: 262 RNEAVEQMSQVRNRNAV--HRELSRIHTPFDEVSAHHFSRSLLEGLIFLTNRIIERPQMA 89
++ AVE + + V RE S ++ D + GLI+LTN I R Q
Sbjct: 364 QDSAVEYLLLLSKAKLVPSEREASPSNSCQDSTDTESNNEEQRSGLIYLTNHIARRAQRV 423
Query: 88 TISVSYYDFDALARAAS 38
++ + +D L RAAS
Sbjct: 424 SLKEEHRAYD-LLRAAS 439
>AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down
syndrome cell adhesion molecule protein.
Length = 1029
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 5 YQEQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSG 154
Y+ Q+ +CNS GC+ + + DGS + PL S+ + + G
Sbjct: 561 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEG 609
>AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhesion
molecule splice variant protein.
Length = 1746
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 5 YQEQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSG 154
Y+ Q+ +CNS GC+ + + DGS + PL S+ + + G
Sbjct: 1296 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEG 1344
>AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 2012
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 5 YQEQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSG 154
Y+ Q+ +CNS GC+ + + DGS + PL S+ + + G
Sbjct: 1544 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEG 1592
>AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 1896
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 5 YQEQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSG 154
Y+ Q+ +CNS GC+ + + DGS + PL S+ + + G
Sbjct: 1530 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEG 1578
>AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhesion
molecule isoform CHD2-42 precursor variant protein.
Length = 2023
Score = 29.9 bits (64), Expect = 8.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 5 YQEQVELCNSDGCSSSEGVEIVVADTDGSHLRPLDYSIGEKNKPFKQTSG 154
Y+ Q+ +CNS GC+ + + DGS + PL S+ + + G
Sbjct: 1555 YELQMRVCNSAGCAEKQ-ANFATLNYDGSTIPPLIKSVVQNEEGLTTNEG 1603
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,683,779
Number of Sequences: 237096
Number of extensions: 2585408
Number of successful extensions: 5516
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5508
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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