Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0602
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 382 HPTYINNLDLKNIAKLREYHNNIM 311
           HPTY      K + K  +Y N I+
Sbjct: 303 HPTYFGKTGRKTVLKTNKYCNFII 326


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 254 LQKQCSTEILHIYFLCLICHNI 319
           L K C   I  +Y+L  +C N+
Sbjct: 254 LIKNCVIVIFELYYLSHVCQNV 275


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 457 NHSPSAWLYGRLLTKAVKRSLRSILHPTYINNL 359
           N  P  W+ GR + KAV     ++ H + +  L
Sbjct: 130 NSRPETWVLGREMCKAVPFVELTVAHASVLTIL 162


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 457 NHSPSAWLYGRLLTKAVKRSLRSILHPTYINNL 359
           N  P  W+ GR + KAV     ++ H + +  L
Sbjct: 130 NSRPETWVLGREMCKAVPFVELTVAHASVLTIL 162


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 350 KYRKTTRIS**YYDRLSTRNIYGVFLYYIVFGERKK 243
           K +KT R    YY        YGV + Y +  + +K
Sbjct: 106 KIKKTKRYCYYYYAFFGVHLAYGVVIIYSICVQTEK 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,382
Number of Sequences: 336
Number of extensions: 3076
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)