Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0599
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.57 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 447 CKFYKVSPCSEGTFYSAYRSWG 382
           C +Y +   SE TFY   R WG
Sbjct: 115 CSYYSLDDLSEDTFYD-IRLWG 135


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 233 IPPPNTGGNPCGASP 189
           IPP + GG P G  P
Sbjct: 60  IPPHHYGGPPSGGQP 74


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 114 GLRSEASSRLGTCFYW 67
           G  SEA      CFYW
Sbjct: 306 GATSEAEKIAKICFYW 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,146
Number of Sequences: 336
Number of extensions: 3595
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)