Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0599
(680 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 141 9e-34
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 126 3e-29
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 126 3e-29
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 121 1e-27
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 121 1e-27
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 119 3e-27
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 118 1e-26
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 110 2e-24
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 110 2e-24
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 87 2e-17
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 87 2e-17
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 87 2e-17
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 87 3e-17
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 74 2e-13
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 69 8e-12
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 68 1e-11
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 68 1e-11
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 68 1e-11
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 68 1e-11
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 68 1e-11
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 54 2e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 46 5e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 31 1.5
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 4.5
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 29 7.8
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 141 bits (341), Expect = 9e-34
Identities = 77/216 (35%), Positives = 108/216 (50%)
Frame = +3
Query: 30 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXX 209
LA FADD V Y SR + A +Q A +W R+W I IN +K V F
Sbjct: 671 LATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKR---- 726
Query: 210 XXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 389
PP+ + +P KYLGV LD +TF H+ +R R + + Y +
Sbjct: 727 -------RTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWL 779
Query: 390 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFV 569
+ RSK+SL NK+T+YK + P Y ++ A +HI +Q++Q++ RL G WFV
Sbjct: 780 LSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFV 839
Query: 570 RNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRL 677
RN LH DL L ++ + S RY D+ RH NRL
Sbjct: 840 RNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRL 875
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 126 bits (304), Expect = 3e-29
Identities = 65/205 (31%), Positives = 108/205 (52%)
Frame = +3
Query: 3 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVL 182
DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K A+
Sbjct: 683 DIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIF 742
Query: 183 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAA 362
F L PI W ++YLG+ D +TF+ HI + +
Sbjct: 743 FTKRRKPRYLPDRQLRILDSPIQ-------WVDNIRYLGIIFDKKLTFKYHINNTIMKVN 795
Query: 363 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 542
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +
Sbjct: 796 KIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLK 855
Query: 543 LAVGAPWFVRNVDLHDDLGLESIRK 617
L + P++ LH G++ +++
Sbjct: 856 LIMNLPYYTNTKYLHIKAGVQKVQQ 880
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 126 bits (304), Expect = 3e-29
Identities = 65/205 (31%), Positives = 108/205 (52%)
Frame = +3
Query: 3 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVL 182
DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP K A+
Sbjct: 631 DIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIF 690
Query: 183 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAA 362
F L PI W ++YLG+ D +TF+ HI + +
Sbjct: 691 FTKRRKPRYLPDRQLRILDSPIQ-------WVDNIRYLGIIFDKKLTFKYHINNTIMKVN 743
Query: 363 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 542
I+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +
Sbjct: 744 KIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLK 803
Query: 543 LAVGAPWFVRNVDLHDDLGLESIRK 617
L + P++ LH G++ +++
Sbjct: 804 LIMNLPYYTNTKYLHIKAGVQKVQQ 828
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 121 bits (291), Expect = 1e-27
Identities = 71/225 (31%), Positives = 110/225 (48%)
Frame = +3
Query: 3 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVL 182
D P + FADDT + S+ L ++ +W WRI IN K V
Sbjct: 653 DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVT 712
Query: 183 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAA 362
F PP+ L + IP A +V YLGV LD +T+R HI++
Sbjct: 713 FTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLK 761
Query: 363 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 542
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R
Sbjct: 762 LKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILR 821
Query: 543 LAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRL 677
+ GAPW++RN ++H DL ++ + + + +Y +K H N L
Sbjct: 822 IITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 121 bits (291), Expect = 1e-27
Identities = 71/225 (31%), Positives = 110/225 (48%)
Frame = +3
Query: 3 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVL 182
D P + FADDT + S+ L ++ +W WRI IN K V
Sbjct: 653 DFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVT 712
Query: 183 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAA 362
F PP+ L + IP A +V YLGV LD +T+R HI++
Sbjct: 713 FTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLK 761
Query: 363 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 542
L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q QSR R
Sbjct: 762 LKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILR 821
Query: 543 LAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRL 677
+ GAPW++RN ++H DL ++ + + + +Y +K H N L
Sbjct: 822 IITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 119 bits (287), Expect = 3e-27
Identities = 67/214 (31%), Positives = 110/214 (51%)
Frame = +3
Query: 3 DIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVL 182
DIP + ++ FADDT + SR+ +L + + +W WRI +N K V
Sbjct: 655 DIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVT 714
Query: 183 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAA 362
F PP+ L S +P A +V YLGV LD +T+R HI++ + +
Sbjct: 715 FTLNRQDC-----------PPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLK 763
Query: 363 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 542
L+ +I S +SL +KV LY + ++P+ TY S ++ +A+ ++ID +Q QS+ R
Sbjct: 764 LKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILR 823
Query: 543 LAVGAPWFVRNVDLHDDLGLESIRKYMKSASERY 644
GAPW+VR+ ++ DL + S+ + E+Y
Sbjct: 824 TITGAPWYVRSENIQRDLNIPSVTNAITELKEKY 857
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 118 bits (283), Expect = 1e-26
Identities = 66/216 (30%), Positives = 108/216 (50%)
Frame = +3
Query: 30 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXX 209
LA +ADD + YSS + A+ LQ L W ++W + +NP K F
Sbjct: 675 LATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSP- 733
Query: 210 XXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 389
+T PI L + + KYLG+TLD +TF PH+K+ R + +L +
Sbjct: 734 --------VTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWL 785
Query: 390 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFV 569
+ ++S M+LR K +Y C+ P+ Y ++ AA+++ + +Q LQ+R R P++V
Sbjct: 786 LNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYV 845
Query: 570 RNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRL 677
R LH DL L ++ + + + RY D+ RH + L
Sbjct: 846 RGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 110 bits (264), Expect = 2e-24
Identities = 63/216 (29%), Positives = 108/216 (50%)
Frame = +3
Query: 30 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXX 209
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 676 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC- 734
Query: 210 XXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 389
P ++L + I + KYLG+TLD +TF HI +++ + R+ +
Sbjct: 735 ----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWL 784
Query: 390 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFV 569
I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++
Sbjct: 785 IAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYM 844
Query: 570 RNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRL 677
R D+ DL + + +++ +++Y ++ H N L
Sbjct: 845 RTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSL 880
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 110 bits (264), Expect = 2e-24
Identities = 63/216 (29%), Positives = 108/216 (50%)
Frame = +3
Query: 30 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXX 209
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 478 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC- 536
Query: 210 XXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 389
P ++L + I + KYLG+TLD +TF HI +++ + R+ +
Sbjct: 537 ----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWL 586
Query: 390 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFV 569
I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++
Sbjct: 587 IAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYM 646
Query: 570 RNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRL 677
R D+ DL + + +++ +++Y ++ H N L
Sbjct: 647 RTRDIERDLKVPKLGDKLQNIAQKYLERLNVHPNSL 682
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 87.0 bits (206), Expect = 2e-17
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Frame = +3
Query: 9 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVL 182
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 183 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAA 362
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 363 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 539
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 540 RLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLI 680
R + A + R D+ ++S + AS+RY + H+N LI
Sbjct: 894 RRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 87.0 bits (206), Expect = 2e-17
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Frame = +3
Query: 9 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVL 182
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 183 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAA 362
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 363 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 539
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 540 RLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLI 680
R + A + R D+ ++S + AS+RY + H+N LI
Sbjct: 894 RRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 87.0 bits (206), Expect = 2e-17
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Frame = +3
Query: 9 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVL 182
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 183 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAA 362
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 363 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 539
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 540 RLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLI 680
R + A + R D+ ++S + AS+RY + H+N LI
Sbjct: 894 RRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLI 940
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 86.6 bits (205), Expect = 3e-17
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Frame = +3
Query: 9 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVL 182
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K +L
Sbjct: 275 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 334
Query: 183 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAA 362
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 335 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 386
Query: 363 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 539
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 387 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 446
Query: 540 RLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDNRLI 680
R + A + R D+ ++S + AS+RY + H+N LI
Sbjct: 447 RRIINASRYTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLI 493
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 74.1 bits (174), Expect = 2e-13
Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 4/226 (1%)
Frame = +3
Query: 6 IPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTA 176
I R PT L+ +ADDT V S + + ++ W KW I +N AK
Sbjct: 721 IYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGH 780
Query: 177 VLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDR 356
V+F + + Q+I K YLGVTLD+ +T H+ + +
Sbjct: 781 VIFTLKNDLPTNSMN--------VKIKGQTIKKESKQSYLGVTLDSKLTLSSHVTKLLGK 832
Query: 357 AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSR 533
+ +L ++ RSK+ + K+ + K+ + P+ YA + I +Q ++R
Sbjct: 833 YSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYAIAAWGPLVTDAQIRRVQVEENR 892
Query: 534 FCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDN 671
R A + RN + D G++++ ++ + A R+ + H N
Sbjct: 893 KIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMHRFSETIKSHPN 938
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 68.5 bits (160), Expect = 8e-12
Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 4/226 (1%)
Frame = +3
Query: 6 IPRSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTA 176
I R PT L+ +ADDT V S + + ++ + W KW I +N AK
Sbjct: 709 IYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGH 768
Query: 177 VLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDR 356
V+F + + Q I K YLGV LD+ +T H+ + +
Sbjct: 769 VIFTLKNDLPTSLRT--------MKIKGQVIKIESKQSYLGVILDSKLTLSSHVTKLMGK 820
Query: 357 AAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSR 533
++ ++ +RSK+ + K+ + K+ + P+ YA + I +Q ++R
Sbjct: 821 YTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENR 880
Query: 534 FCRLAVGAPWFVRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDN 671
R A + N + D G++++ ++ + A R+ + H N
Sbjct: 881 KMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFSETIKSHPN 926
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 67.7 bits (158), Expect = 1e-11
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Frame = +3
Query: 30 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXX 209
L+ +ADDT V S + + ++ W KW I +N AK V++
Sbjct: 604 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 663
Query: 210 XXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 389
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 664 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 715
Query: 390 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 566
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 716 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 775
Query: 567 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDN 671
+N + D ++++ ++ + A R+ + H N
Sbjct: 776 TKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 810
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 67.7 bits (158), Expect = 1e-11
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Frame = +3
Query: 30 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXX 209
L+ +ADDT V S + + ++ W KW I +N AK V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 779
Query: 210 XXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 389
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 780 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 831
Query: 390 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 566
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 832 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 891
Query: 567 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDN 671
+N + D ++++ ++ + A R+ + H N
Sbjct: 892 TKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 926
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 67.7 bits (158), Expect = 1e-11
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Frame = +3
Query: 30 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXX 209
L+ +ADDT V S + + ++ W KW I +N AK V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 779
Query: 210 XXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 389
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 780 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 831
Query: 390 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 566
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 832 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 891
Query: 567 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDN 671
+N + D ++++ ++ + A R+ + H N
Sbjct: 892 TKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 926
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 67.7 bits (158), Expect = 1e-11
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Frame = +3
Query: 30 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXX 209
L+ +ADDT V S + + ++ W KW I +N AK V++
Sbjct: 682 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 741
Query: 210 XXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 389
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 742 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 793
Query: 390 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 566
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 794 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 853
Query: 567 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDN 671
+N + D ++++ ++ + A R+ + H N
Sbjct: 854 TKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 888
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 67.7 bits (158), Expect = 1e-11
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Frame = +3
Query: 30 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXX 209
L+ +ADDT V S + + ++ W KW I +N AK V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 779
Query: 210 XXXXXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 389
NL + + Q+I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 780 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 831
Query: 390 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWF 566
+ +RSK+ K+ + K+ + P+ YA + I +Q ++R R A +
Sbjct: 832 LNERSKLPTNTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRY 891
Query: 567 VRNVDLHDDLGLESIRKYMKSASERYFDKAMRHDN 671
+N + D ++++ ++ + A R+ + H N
Sbjct: 892 TKNQTIRDRYCVKTVEEFYQQAVHRFSETTKSHPN 926
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 54.0 bits (124), Expect = 2e-07
Identities = 31/138 (22%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Frame = +3
Query: 261 QSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 440
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 441 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIRK 617
+ + P+ YA + I +Q ++R R A + N + D G++++ +
Sbjct: 64 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEE 123
Query: 618 YMKSASERYFDKAMRHDN 671
+ + A R+ + H N
Sbjct: 124 FYQQALHRFSETIKSHPN 141
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/85 (25%), Positives = 43/85 (50%)
Frame = +3
Query: 240 PPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 419
P + +++P+ + +YLG+T+ M F HI S+R R ++G L ++ S R
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPR 778
Query: 420 NKVTLYKTCIRPVMTYASVVFAHAA 494
+ T+Y + P + + + V+ A
Sbjct: 779 ARRTIYDGLMAPCVLFGAPVWYDTA 803
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/97 (20%), Positives = 44/97 (45%)
Frame = +3
Query: 267 IPWAKKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 446
IP +K LG+TL+ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 447 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 557
I + Y ++ HA ++ ++ +++ + RLA+GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 276 AKKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 392
A+ +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/107 (19%), Positives = 39/107 (36%)
Frame = +3
Query: 39 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKRTAVLFQXXXXXXXXXX 218
FADD + + + A+ W +++ P K AVL
Sbjct: 83 FADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPEKTKAVLISSRKAVE---- 138
Query: 219 XXXXNLTPPITLFSQSIPWAKKVKYLGVTLDASMTFRPHIKSVRDRA 359
T + + + ++ +KYL V +D ++FR H+ +A
Sbjct: 139 ------TATVEVGGTLVSSSRAIKYLEVMIDTRLSFREHLAYASSKA 179
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,861,216
Number of Sequences: 53049
Number of extensions: 724488
Number of successful extensions: 1800
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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