Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0595
(720 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 141 8e-34
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 141 8e-34
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 134 1e-31
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 125 5e-29
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 121 9e-28
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 121 9e-28
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 116 2e-26
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 115 6e-26
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 115 6e-26
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 77 2e-14
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 77 2e-14
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 77 2e-14
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 77 3e-14
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 75 7e-14
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 70 3e-12
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 67 2e-11
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 67 2e-11
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 67 2e-11
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 67 2e-11
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 67 2e-11
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 50 4e-06
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 48 1e-05
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 36 0.055
AE014296-3472|AAS65085.1| 558|Drosophila melanogaster CG33486-P... 32 0.90
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 31 1.6
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 31 1.6
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 31 2.1
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 141 bits (342), Expect = 8e-34
Identities = 75/235 (31%), Positives = 123/235 (52%)
Frame = +3
Query: 3 RSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKL 182
+S+ R L AGVPQG +DIP++ L+LFADD VY + + S I + +
Sbjct: 656 QSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSM 715
Query: 183 QSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAR 362
QS L +++KW+I INP K+ A+ F L PI W
Sbjct: 716 QSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQ-------WVD 768
Query: 363 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 542
++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK+ ++KT P++
Sbjct: 769 NIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPIL 828
Query: 543 TYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLK 707
Y S V+ A+THI LQ Q++ +L + P++ LH G++ +Q+ ++
Sbjct: 829 MYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 141 bits (342), Expect = 8e-34
Identities = 75/235 (31%), Positives = 123/235 (52%)
Frame = +3
Query: 3 RSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKL 182
+S+ R L AGVPQG +DIP++ L+LFADD VY + + S I + +
Sbjct: 604 QSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSM 663
Query: 183 QSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAR 362
QS L +++KW+I INP K+ A+ F L PI W
Sbjct: 664 QSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQ-------WVD 716
Query: 363 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 542
++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK+ ++KT P++
Sbjct: 717 NIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPIL 776
Query: 543 TYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLK 707
Y S V+ A+THI LQ Q++ +L + P++ LH G++ +Q+ ++
Sbjct: 777 MYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 831
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 134 bits (324), Expect = 1e-31
Identities = 78/234 (33%), Positives = 113/234 (48%), Gaps = 5/234 (2%)
Frame = +3
Query: 6 SSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP-----PTHLALFADDTTVYYSSRNKSLI 170
S+ + AGVPQG +D+P+ + LA FADD V Y SR +
Sbjct: 631 STEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDA 690
Query: 171 AKKLQSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSI 350
A +Q A +W R+W I IN +KS V F PP+ + +
Sbjct: 691 ADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKR-----------RTPPPVYIEEVPV 739
Query: 351 PWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 530
P KYLGV LD +TF H+ +R R + + Y ++ RSK+SL NK+T+YK +
Sbjct: 740 PQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQIL 799
Query: 531 RPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESI 692
P Y ++ A +HI +Q++Q++ RL G WFVRN LH DL L ++
Sbjct: 800 APNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATV 853
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 125 bits (302), Expect = 5e-29
Identities = 73/238 (30%), Positives = 117/238 (49%)
Frame = +3
Query: 6 SSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQ 185
S+ + AGVPQG DIP + ++ FADDT + SR+ +L
Sbjct: 629 STVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLA 688
Query: 186 SAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARK 365
+ + +W WRI +N K V F PP+ L S +P A +
Sbjct: 689 LYLIDIKKWLSDWRIKVNEQKCKHVTFTLNRQDC-----------PPLLLNSIPLPKADE 737
Query: 366 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMT 545
V YLGV LD +T+R HI++ + + L+ +I S +SL +KV LY + ++P+ T
Sbjct: 738 VTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWT 797
Query: 546 YASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLKSASE 719
Y S ++ +A+ ++ID +Q QS+ R GAPW+VR+ ++ DL + S+ + E
Sbjct: 798 YGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVTNAITELKE 855
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 121 bits (292), Expect = 9e-28
Identities = 72/224 (32%), Positives = 109/224 (48%)
Frame = +3
Query: 21 LTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 200
+ AGVPQG D P + FADDT + S+ L +
Sbjct: 632 IEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTS 691
Query: 201 LGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 380
+ +W WRI+IN K V F PP+ L + IP A +V YLG
Sbjct: 692 VERWLADWRISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLG 740
Query: 381 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVV 560
V LD +T+R HI++ L+ +I RS +SL K LY + ++P+ TY S +
Sbjct: 741 VHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSEL 800
Query: 561 FAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESI 692
+ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ +
Sbjct: 801 WGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLV 844
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 121 bits (292), Expect = 9e-28
Identities = 72/224 (32%), Positives = 109/224 (48%)
Frame = +3
Query: 21 LTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALA 200
+ AGVPQG D P + FADDT + S+ L +
Sbjct: 632 IEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTS 691
Query: 201 LGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLG 380
+ +W WRI+IN K V F PP+ L + IP A +V YLG
Sbjct: 692 VERWLADWRISINVQKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLG 740
Query: 381 VTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVV 560
V LD +T+R HI++ L+ +I RS +SL K LY + ++P+ TY S +
Sbjct: 741 VHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSEL 800
Query: 561 FAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESI 692
+ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ +
Sbjct: 801 WGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLV 844
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 116 bits (280), Expect = 2e-26
Identities = 72/241 (29%), Positives = 115/241 (47%), Gaps = 8/241 (3%)
Frame = +3
Query: 6 SSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH--------LALFADDTTVYYSSRNK 161
S PR + AGVPQG D+P H LA +ADD + YSS
Sbjct: 632 SIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCC 691
Query: 162 SLIAKKLQSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFS 341
+ A+ LQ L W ++W + +NP K+ F +T PI L
Sbjct: 692 NEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSP---------VTAPIELEG 742
Query: 342 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 521
+ + KYLG+TLD +TF PH+K+ R + +L ++ ++S M+LR K +Y
Sbjct: 743 VILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYV 802
Query: 522 TCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKY 701
C+ P+ Y ++ AA+++ + +Q LQ+R R P++VR LH DL L ++++
Sbjct: 803 HCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQ 862
Query: 702 L 704
+
Sbjct: 863 I 863
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 115 bits (277), Expect = 6e-26
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 8/247 (3%)
Frame = +3
Query: 3 RSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH--------LALFADDTTVYYSSRN 158
+SS +P+ AGVPQG +D+P P +A +ADDT V S++
Sbjct: 632 KSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKS 691
Query: 159 KSLIAKKLQSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLF 338
LQ A QW W + IN K V F P ++L
Sbjct: 692 ILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC-----------PGVSLN 740
Query: 339 SQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLY 518
+ I + KYLG+TLD +TF HI +++ + R+ +I R+K+SL KV +Y
Sbjct: 741 GRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIY 800
Query: 519 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 698
K+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + +
Sbjct: 801 KSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGD 860
Query: 699 YLKSASE 719
L++ ++
Sbjct: 861 KLQNIAQ 867
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 115 bits (277), Expect = 6e-26
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 8/247 (3%)
Frame = +3
Query: 3 RSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH--------LALFADDTTVYYSSRN 158
+SS +P+ AGVPQG +D+P P +A +ADDT V S++
Sbjct: 434 KSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKS 493
Query: 159 KSLIAKKLQSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLF 338
LQ A QW W + IN K V F P ++L
Sbjct: 494 ILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC-----------PGVSLN 542
Query: 339 SQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLY 518
+ I + KYLG+TLD +TF HI +++ + R+ +I R+K+SL KV +Y
Sbjct: 543 GRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIY 602
Query: 519 KTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 698
K+ + P + Y V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + +
Sbjct: 603 KSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGD 662
Query: 699 YLKSASE 719
L++ ++
Sbjct: 663 KLQNIAQ 669
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 77.0 bits (181), Expect = 2e-14
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Frame = +3
Query: 90 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRININPAKSTAVL 263
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 264 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 443
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 444 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 620
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 621 RLAVGAPWFVRNVDLHDDLGLESIQKYLKSASE 719
R + A + R D+ ++S + AS+
Sbjct: 894 RRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 77.0 bits (181), Expect = 2e-14
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Frame = +3
Query: 90 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRININPAKSTAVL 263
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 264 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 443
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 444 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 620
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 621 RLAVGAPWFVRNVDLHDDLGLESIQKYLKSASE 719
R + A + R D+ ++S + AS+
Sbjct: 894 RRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 77.0 bits (181), Expect = 2e-14
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Frame = +3
Query: 90 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRININPAKSTAVL 263
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 264 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 443
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 782 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 833
Query: 444 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 620
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 834 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 893
Query: 621 RLAVGAPWFVRNVDLHDDLGLESIQKYLKSASE 719
R + A + R D+ ++S + AS+
Sbjct: 894 RRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 76.6 bits (180), Expect = 3e-14
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 3/213 (1%)
Frame = +3
Query: 90 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRININPAKSTAVL 263
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 275 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 334
Query: 264 FQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAA 443
F TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 335 FSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTI 386
Query: 444 FILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFC 620
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 387 AAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYI 446
Query: 621 RLAVGAPWFVRNVDLHDDLGLESIQKYLKSASE 719
R + A + R D+ ++S + AS+
Sbjct: 447 RRIINASRYTRQADIRTKYNIKSFDETFDKASQ 479
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 75.4 bits (177), Expect = 7e-14
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 9/238 (3%)
Frame = +3
Query: 27 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 182
AGVPQG +D+P R PT L+ +ADDT V S + +
Sbjct: 696 AGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNN 755
Query: 183 QSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAR 362
++ W KW I++N AK+ V+F + + Q+I
Sbjct: 756 ENYLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMN--------VKIKGQTIKKES 807
Query: 363 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 542
K YLGVTLD+ +T H+ + + + +L ++ RSK+ + K+ + K+ + P+
Sbjct: 808 KQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIW 867
Query: 543 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLKSA 713
YA + I +Q ++R R A + RN + D G+++++++ + A
Sbjct: 868 QYAIAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQA 925
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 70.1 bits (164), Expect = 3e-12
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 9/238 (3%)
Frame = +3
Query: 27 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 182
AGVPQG +D+P R PT L+ +ADDT V S + +
Sbjct: 684 AGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNN 743
Query: 183 QSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAR 362
++ + W KW I++N AK+ V+F + + Q I
Sbjct: 744 ENYLKSFSDWADKWGISVNAAKTGHVIFTLKNDLPTSLRT--------MKIKGQVIKIES 795
Query: 363 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 542
K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIW 855
Query: 543 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLKSA 713
YA + I +Q ++R R A + N + D G+++++++ + A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQA 913
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 67.3 bits (157), Expect = 2e-11
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 9/238 (3%)
Frame = +3
Query: 27 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 182
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 568 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 627
Query: 183 QSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAR 362
++ W KW I++N AK+ V++ NL + + Q+I
Sbjct: 628 ENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKES 679
Query: 363 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 542
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 680 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 739
Query: 543 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLKSA 713
YA + I +Q ++R R A + +N + D +++++++ + A
Sbjct: 740 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQA 797
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 67.3 bits (157), Expect = 2e-11
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 9/238 (3%)
Frame = +3
Query: 27 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 182
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 684 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 743
Query: 183 QSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAR 362
++ W KW I++N AK+ V++ NL + + Q+I
Sbjct: 744 ENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKES 795
Query: 363 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 542
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 855
Query: 543 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLKSA 713
YA + I +Q ++R R A + +N + D +++++++ + A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQA 913
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 67.3 bits (157), Expect = 2e-11
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 9/238 (3%)
Frame = +3
Query: 27 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 182
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 684 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 743
Query: 183 QSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAR 362
++ W KW I++N AK+ V++ NL + + Q+I
Sbjct: 744 ENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKES 795
Query: 363 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 542
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 855
Query: 543 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLKSA 713
YA + I +Q ++R R A + +N + D +++++++ + A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQA 913
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 67.3 bits (157), Expect = 2e-11
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 9/238 (3%)
Frame = +3
Query: 27 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 182
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 646 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 705
Query: 183 QSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAR 362
++ W KW I++N AK+ V++ NL + + Q+I
Sbjct: 706 ENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKES 757
Query: 363 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 542
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 758 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 817
Query: 543 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLKSA 713
YA + I +Q ++R R A + +N + D +++++++ + A
Sbjct: 818 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQA 875
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 67.3 bits (157), Expect = 2e-11
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 9/238 (3%)
Frame = +3
Query: 27 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 182
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 684 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 743
Query: 183 QSAALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWAR 362
++ W KW I++N AK+ V++ NL + + Q+I
Sbjct: 744 ENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT-------NLKT-MKIKGQAIKKES 795
Query: 363 KVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVM 542
K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 855
Query: 543 TYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYLKSA 713
YA + I +Q ++R R A + +N + D +++++++ + A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQA 913
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 49.6 bits (113), Expect = 4e-06
Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 2/188 (1%)
Frame = +3
Query: 18 PLTAGVPQGXXXXXXXXXXXXNDIPR--SPPTHLALFADDTTVYYSSRNKSLIAKKLQSA 191
P+T G PQG + + + P L+ +ADD + +++++ +K
Sbjct: 627 PVTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQL 686
Query: 192 ALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVK 371
+ W + ++ +K+ +L + P + +++P+ R +
Sbjct: 687 MSIVETWGAEVGDCLSTSKTVIMLLKGALRR-----------APTVRFAGRNLPYVRSCR 735
Query: 372 YLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYA 551
YLG+T+ M F HI S+R R ++G L ++ S R + T+Y + P + +
Sbjct: 736 YLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLFG 795
Query: 552 SVVFAHAA 575
+ V+ A
Sbjct: 796 APVWYDTA 803
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 48.4 bits (110), Expect = 1e-05
Identities = 28/125 (22%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +3
Query: 342 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 521
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 522 TCIRPVMTYASVVFAH-AARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 698
+ + P+ YA + I +Q ++R R A + N + D G++++++
Sbjct: 64 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEE 123
Query: 699 YLKSA 713
+ + A
Sbjct: 124 FYQQA 128
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.055
Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 3/143 (2%)
Frame = +3
Query: 21 LTAGVPQGXXXXXXXXXXXXNDIPRSP---PTHLALFADDTTVYYSSRNKSLIAKKLQSA 191
+T GVPQG + I R P + + FADD + + +
Sbjct: 47 VTGGVPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRN 106
Query: 192 ALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVK 371
A+ W + + P K+ AVL T + + + +R +K
Sbjct: 107 IRAIEHWLSSMGLELAPEKTKAVLISSRKAVE----------TATVEVGGTLVSSSRAIK 156
Query: 372 YLGVTLDASMTFRPHIKSVRDRA 440
YL V +D ++FR H+ +A
Sbjct: 157 YLEVMIDTRLSFREHLAYASSKA 179
>AE014296-3472|AAS65085.1| 558|Drosophila melanogaster CG33486-PA
protein.
Length = 558
Score = 31.9 bits (69), Expect = 0.90
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 518 QNLHKARHDLRECGVRSRGPHTHRHP 595
Q LH ++H LRE R G H HR P
Sbjct: 18 QILHGSKHSLRELAYRQSGKHRHRGP 43
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/97 (20%), Positives = 44/97 (45%)
Frame = +3
Query: 348 IPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTC 527
IP +K LG+TL+ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 528 IRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAVGA 638
I + Y ++ HA ++ ++ +++ + RLA+GA
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 31.1 bits (67), Expect = 1.6
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 6/157 (3%)
Frame = +3
Query: 21 LTAGVPQGXXXXXXXXXXXXNDIPR-SPPTHLAL--FADDTTVYYSSRNKSLIAKKLQSA 191
++AGVPQG + I S P + L FADD + ++ + A
Sbjct: 609 VSAGVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVA 668
Query: 192 ALALGQWFRKWRININPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFSQSIPWARKVK 371
A +W K + I K+ VL + + I A +K
Sbjct: 669 ITAAIEWLEKVGLKIAAHKTEVVLLSSRKSVECMR----------VEVKGVEIASAETLK 718
Query: 372 YLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 473
YLGV +D ++F+ H + +AA L R+ P +
Sbjct: 719 YLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 6 SSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSR 155
SS + AGVPQG DIP + + FADDT + SR
Sbjct: 168 SSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQLTIFTFADDTAIISRSR 217
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,679,020
Number of Sequences: 53049
Number of extensions: 857576
Number of successful extensions: 2305
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2282
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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