Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0595
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    22   5.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.9  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 651 RNVDLHDDLGLESIQKYL 704
           RN+D+  D GL ++ +YL
Sbjct: 48  RNMDIEHDPGLAAVLQYL 65


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 197  SPRTVVPKMAHKHQPSEKYCGALSEG 274
            S RT VP++A      E Y G  + G
Sbjct: 1336 SRRTPVPRLAQDSSEDESYRGPSASG 1361


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 712 ADFRYFCID 686
           AD+RYFC D
Sbjct: 280 ADYRYFCPD 288


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 712 ADFRYFCID 686
           AD+RYFC D
Sbjct: 280 ADYRYFCPD 288


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 712 ADFRYFCID 686
           AD+RYFC D
Sbjct: 280 ADYRYFCPD 288


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +2

Query: 263  LSEGKLHTDFLPY*EEESHTPDYSL*SIHTLGQEGQVPGRYPG 391
            L  G +    + Y E  S  P Y+  S+   G+EG    R  G
Sbjct: 1034 LRHGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEGGAELRLTG 1076


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +2

Query: 263  LSEGKLHTDFLPY*EEESHTPDYSL*SIHTLGQEGQVPGRYPG 391
            L  G +    + Y E  S  P Y+  S+   G+EG    R  G
Sbjct: 1030 LRHGDIQGFNVGYRETSSSNPSYNFSSVSGDGEEGGAELRLTG 1072


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,639
Number of Sequences: 438
Number of extensions: 5086
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)