Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0594
(688 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2) 29 2.7
SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0) 29 4.7
SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5) 29 4.7
SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 522 SWIVARRTSAKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
SWI RRT+AKAFAK VFINQERKLE RRR +T LVLT+N
Sbjct: 4 SWIYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +3
Query: 537 RRTSAKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
RRT+AKAFAK VFINQERKLE RRR +T LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +3
Query: 537 RRTSAKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
RRT+AKAFAK VFINQERKLE RRR +T LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +3
Query: 537 RRTSAKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
RRT+AKAFAK VFINQERKLE RRR +T LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +3
Query: 537 RRTSAKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
RRT+AKAFAK VFINQERKLE RRR +T LVLT+N
Sbjct: 11 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 45
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3
Query: 540 RTSAKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
RT+AKAFAK VFINQERKLE RRR +T LVLT+N
Sbjct: 29 RTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 62
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +3
Query: 540 RTSAKAFAKGVFINQERKLEVRRRLNT 620
RT+AKAFAK VFINQERKLE RRR +T
Sbjct: 2 RTTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Frame = +3
Query: 537 RRTS-AKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
R+T+ ++ AK VFINQERKLE RRR +T LVLT+N
Sbjct: 8 RKTNYCESIAKNVFINQERKLEDRRRSDTVLVLTIN 43
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 515 VKFLDRRKTNISESICQRCFHQSRTKV 595
VKFLD RKTN ESI + F K+
Sbjct: 2 VKFLDLRKTNYCESIAKNVFINQERKL 28
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = +3
Query: 537 RRTS-AKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
R+T+ ++ + VFINQERKLE RRR +T LVLT+N
Sbjct: 8 RKTNYCESICQDVFINQERKLEDRRRSDTVLVLTIN 43
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2
Query: 515 VKFLDRRKTNISESICQRCFHQSRTKV 595
VKFLD RKTN ESICQ F K+
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKL 28
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 537 RRTS-AKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
R+T+ ++ + FINQERKLE RRR +T LVLT+N
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 518 KFLDRRKTNISESICQRCFHQSRTKV 595
+ L RKTN ESICQ CF K+
Sbjct: 3 EILGFRKTNYCESICQECFINQERKL 28
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 537 RRTS-AKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
R+T+ ++ + FINQERKLE RRR +T LVLT+N
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2
Query: 515 VKFLDRRKTNISESICQRCFHQSRTKV 595
VKFLD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +1
Query: 46 TLTRPRNRNEYTLNILTRNNWRASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 222
T + R ++++ R +WRASL Y K+VAVKKLVV F VG P
Sbjct: 44 TCQQTTTRVHAAMHLVIRIHWRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 102
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/36 (55%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 537 RRTS-AKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
R+T+ ++ + FINQERKLE RRR +T LVLT+N
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2
Query: 515 VKFLDRRKTNISESICQRCFHQSRTKV 595
VKFLD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
>SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = +1
Query: 97 RNNWRASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 222
R +WRASL Y K+VAVKKLVV F VG P
Sbjct: 14 RIHWRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 55
>SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +1
Query: 109 RASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 222
RASL Y K+VAVKKLVV F VG P
Sbjct: 5 RASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 42
>SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +1
Query: 97 RNNWRASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 222
R ASL Y K+VAVKKLVV F VG P
Sbjct: 24 RERRAASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 65
>SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2)
Length = 111
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 157 YTKIVAVKKLVVAFVRRAVGAP 222
Y K+VAVKKLVV F VG P
Sbjct: 88 YIKVVAVKKLVVGFRDGTVGPP 109
>SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 157 YTKIVAVKKLVVAFVRRAVGAP 222
Y K+VAVKKLVV F VG P
Sbjct: 89 YIKVVAVKKLVVGFRDGTVGPP 110
>SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 157 YTKIVAVKKLVVAFVRRAVGAP 222
Y K+VAVKKLVV F VG P
Sbjct: 17 YIKVVAVKKLVVGFRDGTVGPP 38
>SB_13633| Best HMM Match : Glyco_hydro_31 (HMM E-Value=0)
Length = 663
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 407 RNIQAAFLARFEHSNLFK--VKLSAHLDTHRRAPR*DFDIEPAFFRTPAHRRYA 252
+N + LAR+ + +F ++ AHLDT RR P D+ R RYA
Sbjct: 573 KNPEPELLARWYQTGVFTPFLRAHAHLDTKRREPWLFDDVYKNVIRDALRTRYA 626
>SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5)
Length = 203
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 195 CNYELFNRNNFSIRYWSWNYRGCWH 121
C + RN +RYW W R C H
Sbjct: 91 CEVTVIARNILPVRYWIWLSRKCGH 115
>SB_35396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 454 QNSEVMINRDNWGHSY-CDVRGEILGSSQDEHQRKHLP 564
Q EV +++ GH Y C GE++ S++D H+ +P
Sbjct: 7 QCKEVESSKEILGHPYVCAFAGEVIQSTEDVHKPSWIP 44
>SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 258 ICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYW-SWNY 136
I S S R+RCT S + KC + + F W S+NY
Sbjct: 139 ISSGYYGRSYRLRCTSSTSWKCRLTSISESYFKGNNWFSYNY 180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,168,426
Number of Sequences: 59808
Number of extensions: 390996
Number of successful extensions: 1085
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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