Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0594
(688 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 3.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 3.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 3.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.8
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 6.3
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 8.3
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = -2
Query: 507 VAIRMPPVIPINH-----YLGVLKTN 445
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = -2
Query: 507 VAIRMPPVIPINH-----YLGVLKTN 445
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Frame = -2
Query: 507 VAIRMPPVIPINH-----YLGVLKTN 445
+A+ PPV+P NH YL V++ N
Sbjct: 353 LAVPAPPVLPENHLKNAKYLDVIERN 378
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +2
Query: 530 RRKTNISESICQRCFHQ 580
RR+ N++E++C F Q
Sbjct: 966 RRRLNVNETVCSDYFSQ 982
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 234 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 136
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 234 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 136
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 234 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 136
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 234 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 136
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 234 SPRMRCTDSAAHKCNYELFNRNNFSIRYWSWNY 136
S + S ++ NY +N NN+ ++ NY
Sbjct: 76 SKEPKIISSLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.8 bits (44), Expect = 6.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +3
Query: 519 NSWIVARRTSAKAFAKGVFINQERKLEVRRRLNTALVLTVN 641
N +VAR A F V IN+ + R+ L+ T+N
Sbjct: 351 NQAVVARHDEAMIFPADVKINRGLXWIISDRMPVFLLXTLN 391
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 49 ESRIVIFRHYLPLVPN 2
E I + H++PL+PN
Sbjct: 493 EPLIELIEHWMPLLPN 508
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,985
Number of Sequences: 438
Number of extensions: 4169
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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