Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0592
         (730 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013173-1|AAH13173.1|  576|Homo sapiens ring finger and SPRY do...    31   5.6  
AK172845-1|BAD18809.1|  576|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AB075852-1|BAB85558.1|  576|Homo sapiens KIAA1972 protein protein.     31   5.6  

>BC013173-1|AAH13173.1|  576|Homo sapiens ring finger and SPRY
           domain containing 1 protein.
          Length = 576

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 613 KLKLELFRCSDTIINAETWSSTTDGLQQRVGICPQ 717
           KL +     SD ++  E+W++  D L+++VG C Q
Sbjct: 260 KLTISESSISDRLVTLESWANDPDYLKRQVGFCAQ 294


>AK172845-1|BAD18809.1|  576|Homo sapiens protein ( Homo sapiens
           cDNA FLJ24006 fis, clone KAT02158. ).
          Length = 576

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 613 KLKLELFRCSDTIINAETWSSTTDGLQQRVGICPQ 717
           KL +     SD ++  E+W++  D L+++VG C Q
Sbjct: 260 KLTISESSISDRLVTLESWANDPDYLKRQVGFCAQ 294


>AB075852-1|BAB85558.1|  576|Homo sapiens KIAA1972 protein protein.
          Length = 576

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 613 KLKLELFRCSDTIINAETWSSTTDGLQQRVGICPQ 717
           KL +     SD ++  E+W++  D L+++VG C Q
Sbjct: 260 KLTISESSISDRLVTLESWANDPDYLKRQVGFCAQ 294


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,477,030
Number of Sequences: 237096
Number of extensions: 2112151
Number of successful extensions: 2885
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2880
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)