Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0592
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.2  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.0  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 645 HHYQRRNVVE-HYRWPPAASRDLS 713
           HH+Q +++   HYR PP  S   S
Sbjct: 354 HHHQTQSLQHLHYRQPPTLSESYS 377


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 250 TRFSYFIRRVIPSPWKSI 197
           TRF YF R V P  ++SI
Sbjct: 110 TRFDYFARTVPPDTFQSI 127


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 250 TRFSYFIRRVIPSPWKSI 197
           TRF YF R V P  ++SI
Sbjct: 200 TRFDYFARTVPPDTFQSI 217


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 276 LYCGSSQVPHVFLILLDVLFLHR 208
           +YC     P++F+  L V  LHR
Sbjct: 114 VYCRDRLNPNLFIYALSVAILHR 136


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 623 LNFFVVATPLSTPKRGRALP 682
           L FF++ +  + P RG A+P
Sbjct: 7   LLFFLLLSSCTRPSRGNAVP 26


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 623 LNFFVVATPLSTPKRGRALP 682
           L FF++ +  + P RG A+P
Sbjct: 7   LLFFLLLSSCTRPSRGNAVP 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,836
Number of Sequences: 438
Number of extensions: 4370
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)