Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0588
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea...    36   0.40 
UniRef50_A4BAD0 Cluster: AMP-binding protein; n=1; Reinekea sp. ...    34   2.1  
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea...    33   3.7  
UniRef50_A2RB68 Cluster: Similarity: only partial similarities f...    33   4.9  
UniRef50_Q022J4 Cluster: Putative uncharacterized protein; n=1; ...    32   6.5  
UniRef50_Q6D1B3 Cluster: 2-C-methyl-D-erythritol 4-phosphate cyt...    32   6.5  
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea...    32   8.6  
UniRef50_Q2SRP0 Cluster: Lipoprotein, putative; n=1; Mycoplasma ...    32   8.6  
UniRef50_Q7XHQ1 Cluster: Calcineurin-like phosphoesterase-like; ...    32   8.6  
UniRef50_Q9VC54 Cluster: CG6695-PA, isoform A; n=3; Sophophora|R...    32   8.6  

>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
           endonuclease-reverse transcriptase, partial; n=7;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           endonuclease-reverse transcriptase, partial -
           Strongylocentrotus purpuratus
          Length = 787

 Score = 36.3 bits (80), Expect = 0.40
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 390 WQGKVEGKRPAGRPPNCWSDQITALIGLCCKRPER 286
           +Q    G+RP GRPP  W DQ+   +GL  +  E+
Sbjct: 466 FQNDFNGRRPRGRPPKRWKDQVQYDVGLSTQEAEQ 500


>UniRef50_A4BAD0 Cluster: AMP-binding protein; n=1; Reinekea sp.
           MED297|Rep: AMP-binding protein - Reinekea sp. MED297
          Length = 551

 Score = 33.9 bits (74), Expect = 2.1
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = -1

Query: 457 LSIAFIYIYIYRRPPDNLERLIVAGQGRREKTRRPATKLLVGSDNCAHWTLL 302
           LS   I +Y YR   D + RL  AG G R++   P  ++ + S NCA W +L
Sbjct: 24  LSDGHIRVYSYREAFDTVSRL--AG-GLRQRGLEPGQRIGILSKNCAEWFIL 72


>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
            endonuclease-reverse transcriptase; n=5;
            Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
            endonuclease-reverse transcriptase - Strongylocentrotus
            purpuratus
          Length = 1030

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 387  QGKVEGKRPAGRPPNCWSDQIT 322
            +GKV G RP GRPP  W D I+
Sbjct: 967  EGKVTGNRPRGRPPKRWLDCIS 988


>UniRef50_A2RB68 Cluster: Similarity: only partial similarities
           found; n=4; Trichocomaceae|Rep: Similarity: only partial
           similarities found - Aspergillus niger
          Length = 815

 Score = 32.7 bits (71), Expect = 4.9
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +3

Query: 36  SDLVKTLTGNNRGYKNRQGQKVMGW 110
           S+LVK+ T N R YK  +G+K+ GW
Sbjct: 289 SELVKSFTVNTREYKVDRGEKIYGW 313


>UniRef50_Q022J4 Cluster: Putative uncharacterized protein; n=1;
           Solibacter usitatus Ellin6076|Rep: Putative
           uncharacterized protein - Solibacter usitatus (strain
           Ellin6076)
          Length = 429

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 177 RGYSSF*SNTSLLKVVSLMALRGSLYHQLP 266
           RGYS F  + + + V SL+AL G+ YH +P
Sbjct: 233 RGYSVFSDSFAAMTVSSLLALAGATYHAMP 262


>UniRef50_Q6D1B3 Cluster: 2-C-methyl-D-erythritol 4-phosphate
           cytidylyltransferase; n=4; Enterobacteriaceae|Rep:
           2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
           - Erwinia carotovora subsp. atroseptica (Pectobacterium
           atrosepticum)
          Length = 237

 Score = 32.3 bits (70), Expect = 6.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 418 PPDNLERLIVAGQGRREKTRRPATKLLVGSDNCAHWTLLQ 299
           PP+ +  L  AG G R +  RP   L +G+D   H T+L+
Sbjct: 8   PPEIVAVLPAAGNGSRMQNDRPKQYLTIGNDATGHKTILE 47


>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
           endonuclease-reverse transcriptase; n=2;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           endonuclease-reverse transcriptase - Strongylocentrotus
           purpuratus
          Length = 958

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 393 LWQGKVEGKRPAGRPPNCWSDQITA 319
           L  G + GKRP GRP   W+D I A
Sbjct: 878 LLNGNIHGKRPRGRPAKRWTDCIKA 902


>UniRef50_Q2SRP0 Cluster: Lipoprotein, putative; n=1; Mycoplasma
           capricolum subsp. capricolum ATCC 27343|Rep:
           Lipoprotein, putative - Mycoplasma capricolum subsp.
           capricolum (strain California kid / ATCC27343 / NCTC
           10154)
          Length = 132

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -2

Query: 324 TALIGLCCKRPERSQKPKQMEADGTKSHEGPSGTRPSAMKYSTKKKNS 181
           TA++ + CK P  SQK    E+D  K  E  +    SA+K  TKK  S
Sbjct: 17  TAVVSVACKTP--SQKITANESDKAKEKEKLTSLASSAIKKETKKVKS 62


>UniRef50_Q7XHQ1 Cluster: Calcineurin-like phosphoesterase-like;
           n=7; Oryza sativa|Rep: Calcineurin-like
           phosphoesterase-like - Oryza sativa subsp. japonica
           (Rice)
          Length = 327

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = -2

Query: 435 YIYIGGHQTTLKD*--LWQGKVEGKRPAGRPPNCWSDQITALIGLCCKRPERSQKPKQME 262
           ++ +G    TL+D   LW   + G+   G+    W D I  L+G+  +     QK ++ E
Sbjct: 86  HLPVGEMTITLQDVSCLWGLPIHGRPITGQADGSWVDMIERLLGIPMEEQHMKQKKRKKE 145

Query: 261 ADGT 250
            D T
Sbjct: 146 DDMT 149


>UniRef50_Q9VC54 Cluster: CG6695-PA, isoform A; n=3; Sophophora|Rep:
           CG6695-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 961

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 16/60 (26%), Positives = 30/60 (50%)
 Frame = +3

Query: 9   SHGRSSTRWSDLVKTLTGNNRGYKNRQGQKVMGWHRASSDQHFKLDTTFERDRLRRRGYS 188
           SH RS +R + + ++ +G+ R    R+ ++   +HR S  +  +    + R R R R  S
Sbjct: 420 SHSRSRSRSATVSRSRSGSRRSGSRRRSRRSRSYHRRSRTRSRRRRRYYSRSRSRSRSRS 479


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,863,689
Number of Sequences: 1657284
Number of extensions: 10708426
Number of successful extensions: 27603
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27595
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)