Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0588
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014491-1|AAH14491.2| 1066|Homo sapiens WD repeat domain 60 pro...    30   5.3  
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p...    29   9.3  
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance...    29   9.3  
BC150254-1|AAI50255.1|  439|Homo sapiens microtubule-associated ...    29   9.3  
BC139780-1|AAI39781.1|  484|Homo sapiens MAP6 protein protein.         29   9.3  
BC063860-1|AAH63860.1|  723|Homo sapiens MAP6 protein protein.         29   9.3  
AK123340-1|BAC85586.1|  484|Homo sapiens protein ( Homo sapiens ...    29   9.3  
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.              29   9.3  
AB058781-1|BAB47507.1|  453|Homo sapiens KIAA1878 protein protein.     29   9.3  

>BC014491-1|AAH14491.2| 1066|Homo sapiens WD repeat domain 60
           protein.
          Length = 1066

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 288 RSQKPKQMEADGTKSHEGPSGTRPSAMKYSTKKKNS 181
           R +KP++ + D  K H   S TR    KYS +K NS
Sbjct: 214 RHRKPREPDRD--KKHREKSSTREKREKYSKEKSNS 247


>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
            protein protein.
          Length = 3703

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 309  LCCKRPERSQKPKQMEADGTKSHEGPSGTRPSAMKYSTKKK 187
            L  K  E+  + ++  A+G + + GP  T P A+K   KK+
Sbjct: 1880 LVIKEKEKESQRERDSAEGGEGNTGPKETLPDALKAKEKKE 1920


>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
            binding protein protein.
          Length = 2783

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 309  LCCKRPERSQKPKQMEADGTKSHEGPSGTRPSAMKYSTKKK 187
            L  K  E+  + ++  A+G + + GP  T P A+K   KK+
Sbjct: 966  LVIKEKEKESQRERDSAEGGEGNTGPKETLPDALKAKEKKE 1006


>BC150254-1|AAI50255.1|  439|Homo sapiens microtubule-associated
           protein 6 protein.
          Length = 439

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -2

Query: 297 RPERSQKPKQM---EADGTKSHEGPSGTRPSAMKYSTKKKNSL 178
           +P R  K KQ    +A   KS EGPS T+P   + S +  N L
Sbjct: 392 KPTRKAKDKQAVSGQAAKKKSAEGPSTTKPDDKEQSKEMNNKL 434


>BC139780-1|AAI39781.1|  484|Homo sapiens MAP6 protein protein.
          Length = 484

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -2

Query: 297 RPERSQKPKQM---EADGTKSHEGPSGTRPSAMKYSTKKKNSL 178
           +P R  K KQ    +A   KS EGPS T+P   + S +  N L
Sbjct: 63  KPTRKAKDKQAVSGQAAKKKSAEGPSTTKPDDKEQSKEMNNKL 105


>BC063860-1|AAH63860.1|  723|Homo sapiens MAP6 protein protein.
          Length = 723

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -2

Query: 297 RPERSQKPKQM---EADGTKSHEGPSGTRPSAMKYSTKKKNSL 178
           +P R  K KQ    +A   KS EGPS T+P   + S +  N L
Sbjct: 302 KPTRKAKDKQAVSGQAAKKKSAEGPSTTKPDDKEQSKEMNNKL 344


>AK123340-1|BAC85586.1|  484|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41346 fis, clone BRAWH2005315, moderately
           similar to Neuronal-STOP protein. ).
          Length = 484

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -2

Query: 297 RPERSQKPKQM---EADGTKSHEGPSGTRPSAMKYSTKKKNSL 178
           +P R  K KQ    +A   KS EGPS T+P   + S +  N L
Sbjct: 63  KPTRKAKDKQAVSGQAAKKKSAEGPSTTKPDDKEQSKEMNNKL 105


>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
          Length = 2553

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 309 LCCKRPERSQKPKQMEADGTKSHEGPSGTRPSAMKYSTKKK 187
           L  K  E+  + ++  A+G + + GP  T P A+K   KK+
Sbjct: 730 LVIKEKEKESQRERDSAEGGEGNTGPKETLPDALKAKEKKE 770


>AB058781-1|BAB47507.1|  453|Homo sapiens KIAA1878 protein protein.
          Length = 453

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = -2

Query: 297 RPERSQKPKQM---EADGTKSHEGPSGTRPSAMKYSTKKKNSL 178
           +P R  K KQ    +A   KS EGPS T+P   + S +  N L
Sbjct: 406 KPTRKAKDKQAVSGQAAKKKSAEGPSTTKPDDKEQSKEMNNKL 448


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,616,691
Number of Sequences: 237096
Number of extensions: 1654304
Number of successful extensions: 3718
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3718
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)