Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0588
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             29   0.021
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   1.8  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   1.8  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   1.8  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   1.8  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   1.8  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   1.8  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   1.8  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   1.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   3.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   3.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   9.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 29.5 bits (63), Expect = 0.021
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 279  KPKQMEADGTKSHEGPSGTRPSAMKYSTKKKNSL 178
            KP+  EA+  K   G  GTRP   KY    ++SL
Sbjct: 1015 KPQSQEANKPKPATGGKGTRPKRGKYRNYDRDSL 1048


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 273 KQMEADGTKSHEGPSGTRPSA 211
           K   +DGT    GP GT+ SA
Sbjct: 102 KLESSDGTSLFRGPEGTQVSA 122


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 273 KQMEADGTKSHEGPSGTRPSA 211
           K   +DGT    GP GT+ SA
Sbjct: 102 KLESSDGTSLFRGPEGTQVSA 122


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 273 KQMEADGTKSHEGPSGTRPSA 211
           K   +DGT    GP GT+ SA
Sbjct: 102 KLESSDGTSLFRGPEGTQVSA 122


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 273 KQMEADGTKSHEGPSGTRPSA 211
           K   +DGT    GP GT+ SA
Sbjct: 102 KLESSDGTSLFRGPEGTQVSA 122


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 273 KQMEADGTKSHEGPSGTRPSA 211
           K   +DGT    GP GT+ SA
Sbjct: 102 KLESSDGTSLFRGPEGTQVSA 122


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 273 KQMEADGTKSHEGPSGTRPSA 211
           K   +DGT    GP GT+ SA
Sbjct: 102 KLESSDGTSLFRGPEGTQVSA 122


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 273 KQMEADGTKSHEGPSGTRPSA 211
           K   +DGT    GP GT+ SA
Sbjct: 102 KLESSDGTSLFRGPEGTQVSA 122


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 273 KQMEADGTKSHEGPSGTRPSA 211
           K   +DGT    GP GT+ SA
Sbjct: 102 KLESSDGTSLFRGPEGTQVSA 122


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 337 PTVWWPAGGSFPFYLALP 390
           P ++W  GG+F F   +P
Sbjct: 123 PVIFWIHGGAFQFGSGIP 140


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 337 PTVWWPAGGSFPFYLALP 390
           P ++W  GG+F F   +P
Sbjct: 123 PVIFWIHGGAFQFGSGIP 140


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 275 GFWLLSGRLQQSPMS 319
           G W+LSG +   P++
Sbjct: 159 GVWILSGAISSPPLA 173


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 275 GFWLLSGRLQQSPMS 319
           G W+LSG +   P++
Sbjct: 159 GVWILSGAISSPPLA 173


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 275 GFWLLSGRLQQSPMS 319
           G W+LSG +   P++
Sbjct: 159 GVWILSGAISSPPLA 173


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 278 NRSKWKLMVQRATK 237
           N SKW   V +ATK
Sbjct: 213 NNSKWDFKVIKATK 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,597
Number of Sequences: 438
Number of extensions: 3394
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)