Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0587
         (676 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0959 - 22885750-22886001,22886073-22886195,22886343-228864...    28   7.8  

>07_03_0959 -
           22885750-22886001,22886073-22886195,22886343-22886429,
           22886504-22886555,22886701-22886825,22887002-22887213,
           22887317-22887518,22887928-22888032,22889643-22889704,
           22889998-22890187,22890260-22890355,22890442-22890544,
           22891448-22891551,22893284-22893370,22894033-22894118,
           22894397-22894489,22895615-22895777,22895899-22896011,
           22896113-22896235,22897393-22897444,22897843-22897886,
           22897975-22898048,22898133-22898224,22899374-22899441,
           22900817-22900892,22900952-22901215
          Length = 1015

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 421 APTLADVSGIFIIATLNSLLGYF 353
           AP++ DV G+   A++N  +GYF
Sbjct: 78  APSIGDVPGVLAAASMNVSVGYF 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,520,861
Number of Sequences: 37544
Number of extensions: 277958
Number of successful extensions: 484
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)