Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0587
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   3.5  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    23   3.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.1  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 310 WQFGNLFKRDIFIEESIPRVNLVLQ 384
           W F     R I +EE IPRV  V++
Sbjct: 89  WDFFVKNARMILLEEYIPRVESVVE 113


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 310 WQFGNLFKRDIFIEESIPRVNLVLQ 384
           W F     R I +EE IPRV  V++
Sbjct: 63  WDFFVKNARMILLEEYIPRVESVVE 87


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 512 MQASIGPPSILYTYLEDLCQLDL*WPGPII 601
           +Q    PP +LY+++E   Q     PGP +
Sbjct: 415 LQLGNAPPMLLYSFIEQTLQ-----PGPAV 439


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 512 MQASIGPPSILYTYLEDLCQLDL*WPGPII 601
           +Q    PP +LY+++E   Q     PGP +
Sbjct: 415 LQLGNAPPMLLYSFIEQTLQ-----PGPAV 439


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 280  YLLHFKNKNNYHNFIF 233
            Y+L  +++N YH  IF
Sbjct: 1103 YMLSLRDENRYHEDIF 1118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,183
Number of Sequences: 438
Number of extensions: 3552
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)