Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0584
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4N7Y0 Cluster: Putative uncharacterized protein; n=1; ...    37   0.61 
UniRef50_Q8TVP6 Cluster: Uncharacterized membrane protein specif...    34   3.3  
UniRef50_Q3W776 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_A2Z4Z8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  

>UniRef50_Q4N7Y0 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 323

 Score = 36.7 bits (81), Expect = 0.61
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 563 NINDNKNRE*ITHGYPAPNYDSPSPAN-QILTYTFNYLPNYLDNRYPNK 706
           N N     + +  GYP PNY  P+PAN  +L       PN   N+YP +
Sbjct: 183 NSNPMVQNQSVPEGYPNPNYLPPNPANPAVLPNPTGEYPNQYPNQYPGE 231


>UniRef50_Q8TVP6 Cluster: Uncharacterized membrane protein specific
           for M.kandleri, MK-31 family; n=1; Methanopyrus
           kandleri|Rep: Uncharacterized membrane protein specific
           for M.kandleri, MK-31 family - Methanopyrus kandleri
          Length = 167

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -3

Query: 313 R*TSLRGRRPPSMRSKSQVQLPAIPRDRNTL-LRGRNSRGGGTYPCGRTTRP 161
           R T + G+ P S   ++  ++   P DR    + GR  R  GTYPC R  RP
Sbjct: 115 RQTVVPGQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPCRRFLRP 166


>UniRef50_Q3W776 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 428

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = -3

Query: 298 RGRRPPSMRSKSQVQLPAIPRDRNTLLRGRNSRGGGTYPCGRTTRPTSS 152
           RGR     R  S    P  PRD  T  RG++ R G T P GR+  P  S
Sbjct: 125 RGRADSGYRGDSGPDGPG-PRDDGTRQRGQSGRAGRTDPTGRSGYPDRS 172


>UniRef50_A2Z4Z8 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 183

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = -3

Query: 388 DKYYPLIASPGKLAQVYLMLRGHQSR*T--SLRGRRPPSMRSKSQVQLPAIPRDRNTLLR 215
           D Y PL+ S G  A+ +  LRG        + RGR    +  +++V +    R R + +R
Sbjct: 5   DLYSPLVPSGGGGARQHPDLRGADGARGDGAARGRATAVVADEAEVVVVTEARRRRSWIR 64

Query: 214 GRNSRGGGT 188
           GR  R GGT
Sbjct: 65  GRARRSGGT 73


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,383,435
Number of Sequences: 1657284
Number of extensions: 14915734
Number of successful extensions: 31236
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31221
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)