Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0584
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020875-1|AAH20875.1|  265|Homo sapiens chromosome 5 open readi...    31   4.4  
AY157581-1|AAO13165.1|  265|Homo sapiens keratinocytes associate...    31   4.4  
AK074963-1|BAC11319.1|  265|Homo sapiens protein ( Homo sapiens ...    31   4.4  
AF226055-1|AAF86955.1|  265|Homo sapiens HTGN29 protein.               31   4.4  

>BC020875-1|AAH20875.1|  265|Homo sapiens chromosome 5 open reading
           frame 15 protein.
          Length = 265

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 157 WWDGLCARTGRYHHPDYFFREAMCSGRV 240
           W DGLC++T  YH  D    EAM S ++
Sbjct: 232 WRDGLCSKTVEYHRLDQNVNEAMPSLKI 259


>AY157581-1|AAO13165.1|  265|Homo sapiens keratinocytes associated
           transmembrane protein 2 protein.
          Length = 265

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 157 WWDGLCARTGRYHHPDYFFREAMCSGRV 240
           W DGLC++T  YH  D    EAM S ++
Sbjct: 232 WRDGLCSKTVEYHRLDQNVNEAMPSLKI 259


>AK074963-1|BAC11319.1|  265|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90482 fis, clone NT2RP3002958, highly similar to
           HTGN29 protein. ).
          Length = 265

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 157 WWDGLCARTGRYHHPDYFFREAMCSGRV 240
           W DGLC++T  YH  D    EAM S ++
Sbjct: 232 WRDGLCSKTVEYHRLDQNVNEAMPSLKI 259


>AF226055-1|AAF86955.1|  265|Homo sapiens HTGN29 protein.
          Length = 265

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 157 WWDGLCARTGRYHHPDYFFREAMCSGRV 240
           W DGLC++T  YH  D    EAM S ++
Sbjct: 232 WRDGLCSKTVEYHRLDQNVNEAMPSLKI 259


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,324,869
Number of Sequences: 237096
Number of extensions: 2245082
Number of successful extensions: 3628
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3628
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)