Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0582
         (331 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    33   0.92 
UniRef50_A6PLE7 Cluster: Putative uncharacterized protein; n=1; ...    30   8.5  
UniRef50_Q54LC7 Cluster: Putative uncharacterized protein; n=1; ...    30   8.5  
UniRef50_A1S1F3 Cluster: Putative uncharacterized protein; n=1; ...    30   8.5  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 33.5 bits (73), Expect = 0.92
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +2

Query: 290 RGGARYPIRPIVSR 331
           RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273


>UniRef50_A6PLE7 Cluster: Putative uncharacterized protein; n=1;
           Victivallis vadensis ATCC BAA-548|Rep: Putative
           uncharacterized protein - Victivallis vadensis ATCC
           BAA-548
          Length = 838

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +2

Query: 2   INQLNDHFA-WITPMPVIMLPKDQR 73
           +  LNDHF  W  P+P I +PKDQ+
Sbjct: 116 LKALNDHFERWEIPIPRIPVPKDQQ 140


>UniRef50_Q54LC7 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 978

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +1

Query: 190 YVFNRFEWLHLTTVTRIIN*LNFNHNQNKIKKNSRGGPVPNSPYSES 330
           Y+ N     H TT T IIN +N N+N N    +S      N+  S S
Sbjct: 299 YLMNNATKTHSTTSTPIINSINNNNNNNNNPSSSSSPSSSNNSQSSS 345


>UniRef50_A1S1F3 Cluster: Putative uncharacterized protein; n=1;
           Thermofilum pendens Hrk 5|Rep: Putative uncharacterized
           protein - Thermofilum pendens (strain Hrk 5)
          Length = 240

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = +2

Query: 17  DHFAWITPMPVIMLPKDQRIDVIHDLSD*KRLSISEN*LKYKKQKTCCLIKYPCFIPPTF 196
           D  AW+  +   +LP  + + +IHD+SD   L+I    L    ++   ++++P  + P F
Sbjct: 24  DVVAWLNDLSPKVLPMGEYVVLIHDVSDLHSLAI----LSRLNRRCTFILEFPVDVDPAF 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,339,801
Number of Sequences: 1657284
Number of extensions: 5003723
Number of successful extensions: 8047
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8044
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 9961543501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)