Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0582
         (331 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003644-1|AAO39648.1|  401|Drosophila melanogaster AT13284p pro...    27   4.3  
AY089225-1|AAL89963.1|  401|Drosophila melanogaster AT02038p pro...    27   4.3  
AE014134-1527|AAF52684.2|  401|Drosophila melanogaster CG13088-P...    27   4.3  

>BT003644-1|AAO39648.1|  401|Drosophila melanogaster AT13284p
           protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 187 AYVFNRFEWLHLTTVTRIIN*LNFNHNQNKIKKNSRGG 300
           AYV  ++ W HL TVT     L+F    NK+     GG
Sbjct: 33  AYV--KYHWSHLKTVTLTREDLDFLDRNNKLMHECLGG 68


>AY089225-1|AAL89963.1|  401|Drosophila melanogaster AT02038p
           protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 187 AYVFNRFEWLHLTTVTRIIN*LNFNHNQNKIKKNSRGG 300
           AYV  ++ W HL TVT     L+F    NK+     GG
Sbjct: 33  AYV--KYHWSHLKTVTLTREDLDFLDRNNKLMHECLGG 68


>AE014134-1527|AAF52684.2|  401|Drosophila melanogaster CG13088-PA
           protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 187 AYVFNRFEWLHLTTVTRIIN*LNFNHNQNKIKKNSRGG 300
           AYV  ++ W HL TVT     L+F    NK+     GG
Sbjct: 33  AYV--KYHWSHLKTVTLTREDLDFLDRNNKLMHECLGG 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,987,472
Number of Sequences: 53049
Number of extensions: 223621
Number of successful extensions: 400
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)