Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0582
         (331 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g31930.2 68414.m03924 extra-large guanine nucleotide binding ...    27   4.0  
At1g31930.1 68414.m03923 extra-large guanine nucleotide binding ...    27   4.0  
At3g14610.1 68416.m01850 cytochrome P450, putative similar to GB...    26   7.0  

>At1g31930.2 68414.m03924 extra-large guanine nucleotide binding
           protein, putative / G-protein, putative similar to
           extra-large G-protein (XLG) [Arabidopsis thaliana]
           GI:3201680; contains Pfam profile PF00503: G-protein
           alpha subunit
          Length = 848

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 161 LIKYPCFIPPTFLIVLNGY 217
           ++K+PCF    F+++LN Y
Sbjct: 716 MVKHPCFKDTPFILILNKY 734


>At1g31930.1 68414.m03923 extra-large guanine nucleotide binding
           protein, putative / G-protein, putative similar to
           extra-large G-protein (XLG) [Arabidopsis thaliana]
           GI:3201680; contains Pfam profile PF00503: G-protein
           alpha subunit
          Length = 848

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 161 LIKYPCFIPPTFLIVLNGY 217
           ++K+PCF    F+++LN Y
Sbjct: 716 MVKHPCFKDTPFILILNKY 734


>At3g14610.1 68416.m01850 cytochrome P450, putative similar to
           GB:Q05047 from [Catharanthus roseus]
          Length = 512

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = +2

Query: 2   INQLNDH----FAWITPMPVIMLPKDQRI-DVIHDLSD*KRLS 115
           +  LN H    F WI P+P I++   ++I +V + ++D ++ S
Sbjct: 85  LKMLNSHGKTFFIWIGPLPTIVITNPEQIKEVFNKVNDFEKAS 127


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,751,392
Number of Sequences: 28952
Number of extensions: 109344
Number of successful extensions: 166
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 380568784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)