Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0580
(621 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 32 0.32
02_05_0157 - 26353971-26354336,26354645-26354726,26354838-263549... 31 0.74
06_01_0036 + 364316-365758 31 0.97
01_05_0438 + 22142646-22143659,22144319-22144858 30 1.3
11_06_0368 + 22756988-22758205 30 1.7
10_03_0023 - 7151465-7152111,7152222-7152405 30 1.7
09_06_0081 + 20745627-20748144,20748211-20748308 30 1.7
06_01_0908 - 7006160-7007488 29 3.0
05_04_0146 + 18393447-18394043 29 3.0
01_05_0008 - 17063377-17063813,17064937-17065052,17065284-170657... 29 3.0
12_02_1149 - 26467252-26468319,26468452-26469147,26469263-264694... 29 3.9
12_02_1014 - 25316682-25317236 29 3.9
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 29 3.9
09_04_0430 + 17502387-17503505 28 5.2
09_03_0199 - 13421210-13421578 28 5.2
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 28 5.2
03_05_0362 + 23455372-23455619,23456570-23456966,23457400-23457561 28 5.2
09_03_0051 + 11902322-11903125 28 6.9
07_01_0479 + 3606663-3607448 28 6.9
07_01_0180 + 1266975-1267550 28 6.9
05_02_0018 + 5626122-5626200,5626683-5626709,5626972-5627042,562... 28 6.9
04_03_0252 - 13517763-13517861,13518845-13519315,13519400-135196... 28 6.9
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 28 6.9
01_06_0032 + 25762331-25762804 28 6.9
12_02_0966 - 24906361-24906958,24907084-24907250,24907403-249076... 27 9.1
10_08_0338 + 16916429-16916650,16916728-16917900 27 9.1
10_06_0179 - 11508235-11508245,11508555-11508942 27 9.1
03_05_0267 - 22538631-22539452 27 9.1
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 386 LPLPWSL--PPMASPHLTESPRPTPLMALTGSPP 481
LP+P + PP + P+ PR TP ++L G PP
Sbjct: 270 LPVPGVICRPPPSPPYFAPPPRATPTVSLAGPPP 303
>02_05_0157 -
26353971-26354336,26354645-26354726,26354838-26354933,
26355365-26356068
Length = 415
Score = 31.1 bits (67), Expect = 0.74
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = -1
Query: 522 AVVIGLPSVDAKAVGGDPVSAISGVGRGDSVRCGDAIGGSDQGRG 388
A V+GL AV G V A+ GVG G S G A GG G G
Sbjct: 43 AGVLGLIGETVGAVVGATVGAVDGVGAGASAGGGVAGGGGVAGGG 87
>06_01_0036 + 364316-365758
Length = 480
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 410 PMASPHLTESPRPTPLMALTGSPPTALASTLGKP 511
P+ P ++SP PT ++ SP T+L S KP
Sbjct: 15 PLPEPDSSKSPEPTSVLYNRSSPSTSLGSCSSKP 48
>01_05_0438 + 22142646-22143659,22144319-22144858
Length = 517
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 480 GGDPVSAISGVGRGDSVRCGDAIGGSDQGRG 388
GGD V+ + GVG GD GD IG +G G
Sbjct: 377 GGDSVTVVQGVGDGDG--GGDGIGRGRKGSG 405
>11_06_0368 + 22756988-22758205
Length = 405
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 407 PPMASPHLTESPRPTPLMALTGS 475
PP+A HL S PTPL+AL+ S
Sbjct: 75 PPVAPVHLRSSRLPTPLIALSAS 97
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 386 LPLPWSLPPMASPHLTESPRPTPLMA--LTGSPPTALASTLGKPITT 520
LPLP PP P P PL+ + G PP A AS G+P++T
Sbjct: 230 LPLPLLNPPPPPPPPPSLLPPVPLLPPLIPGVPP-ASASRSGRPVST 275
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = +2
Query: 389 PLPWSLPPMASPHLTESPRPTP----LMALTGSPPTA 487
P+ S PP +P++ P PTP L+ LT SP TA
Sbjct: 110 PIAHSAPPETTPYVPALPVPTPSTVALVGLTVSPTTA 146
>06_01_0908 - 7006160-7007488
Length = 442
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 516 VIGLPSVDAKAVGGDPVSAISGVGRGDSVRCGDAIGGSDQGRGRW 382
++ LP++ AVGG SA++ +G + R A+ D RGRW
Sbjct: 56 LVALPALVFLAVGGGMPSAVTVLGGAGAAR---AMAECDVSRGRW 97
>05_04_0146 + 18393447-18394043
Length = 198
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 395 PWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGK 508
P SLPP ASP E + A + SPP A + G+
Sbjct: 79 PASLPPSASPPPPEREAAAAMAAASASPPWAPSPARGR 116
>01_05_0008 -
17063377-17063813,17064937-17065052,17065284-17065728,
17066421-17066760
Length = 445
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 386 LPLPWSLPPMASPHLTESPRPTPLMA 463
L L W LPP+A P LT R P A
Sbjct: 373 LDLYWELPPVAGPSLTHQTRYDPARA 398
>12_02_1149 -
26467252-26468319,26468452-26469147,26469263-26469409,
26470936-26471274
Length = 749
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 386 LPLPWSLPPMASPHLTESPRPTPLMALTGSPPTA 487
+PLP LP + +P P P P M +T +P A
Sbjct: 714 IPLPAPLPAIEAPFEFSWPEPPPAMEVTLAPAVA 747
>12_02_1014 - 25316682-25317236
Length = 184
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 389 PLP-WS-LPPMASPHLTESPRPTPLMALTGSPP 481
P+P WS PP+A P + P P P +A+ S P
Sbjct: 110 PMPAWSPAPPVAPPVVVHRPTPRPAVAMPMSSP 142
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALAST 499
P P S P +P L +P P P A +PP A A T
Sbjct: 154 PAPPSPPQDPAPSLPHAPAPPPPQAPAPTPPQAPAPT 190
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 383 HLPLPWSLPPMA-SPHLTESPRPTPLMALTGSPPTA 487
H P P PP A +P ++P PTP A T +PP A
Sbjct: 169 HAPAP--PPPQAPAPTPPQAPAPTPPRAPTPTPPQA 202
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALAST 499
P P SLP +P ++P PTP A +PP A T
Sbjct: 163 PAP-SLPHAPAPPPPQAPAPTPPQAPAPTPPRAPTPT 198
>09_04_0430 + 17502387-17503505
Length = 372
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 386 LPLPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITTASRYFLISAMQK*H 562
LP P PP ++P +P+ TP + PP A+ +P+ S F M H
Sbjct: 182 LPTPPRAPPQSTPP-RAAPQSTPPQRVAPQPPATAAAPPIEPVAPPSPTFWTVCMSCCH 239
>09_03_0199 - 13421210-13421578
Length = 122
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 474 DPVSAISGVGRGDSVRCGDAIGGSDQGRGR 385
D S + VGRG ++ IGGS G GR
Sbjct: 86 DSCSKANDVGRGHAIEGKSGIGGSSWGHGR 115
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 386 LPLPWSLP---PMASPHLTESPRPTPLMALTGSPPTALASTLGKPITTA 523
LP P S+P P +P + P A S PTA A+ +G P TA
Sbjct: 760 LPKPVSIPASGPAPAPVSATTAAPVGAAAAPISEPTAPAAAIGMPSATA 808
>03_05_0362 + 23455372-23455619,23456570-23456966,23457400-23457561
Length = 268
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 389 PLPWSLPPMASPHLTESPRPTPLM 460
PLP+ + P+ASPH + PT M
Sbjct: 21 PLPFRMDPIASPHPMHADSPTAAM 44
>09_03_0051 + 11902322-11903125
Length = 267
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 395 PWSLPPMASPHLTESPRPTPLMALTGSPPTALAST 499
P + PP AS T +P P P +A +PP T
Sbjct: 99 PVAAPPAASEPQTPTPPPRPSVAAPDTPPAQRPET 133
>07_01_0479 + 3606663-3607448
Length = 261
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 386 LPLPWSLPPMASPHLTESPRPTPLMALTGSPP 481
+P+P+ PP P P P P + G PP
Sbjct: 183 MPIPFQRPPGVPPAFPGGPPPPPGPFMRGPPP 214
>07_01_0180 + 1266975-1267550
Length = 191
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 519 VVIGLPSVDAKAVGGDPVSAISGVGRGDSVRCGDAIGG 406
V GL VDA A G D V++ + G V GD GG
Sbjct: 12 VGFGLFGVDAAAFGYDGVASDAAAGLSPVVGAGDGSGG 49
>05_02_0018 +
5626122-5626200,5626683-5626709,5626972-5627042,
5627123-5627248,5627726-5627755
Length = 110
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 510 GLPSVDAKAVGGDPVSAISGVGRGDSVRCGDAIGGSDQ 397
G S DA++ GG A+ G GRG CG++ G ++
Sbjct: 62 GGASHDAESEGGGMRWALVGEGRGSCAACGESGGEGER 99
>04_03_0252 -
13517763-13517861,13518845-13519315,13519400-13519679,
13519747-13519829
Length = 310
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 486 AVGGDPVSAISGVGRG-DSVRCGDAIGGSDQGRG 388
AVGGD +A++G G G ++ G GG D G
Sbjct: 57 AVGGDAAAAVAGSGGGMTTMMMGGGGGGGDDAGG 90
>02_03_0388 +
18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALAST 499
P P S P ++P +P P+P A +PP A A T
Sbjct: 78 PAPPSPPQASAPSPPHAPAPSPPQAPAMTPPQAPAPT 114
>01_06_0032 + 25762331-25762804
Length = 157
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 471 PVSAISGVGRGDSVRCGDAIGGSDQGRGRW 382
P +A + GDSV C GG GRGRW
Sbjct: 32 PAAATTMDEDGDSVECNGGHGG--DGRGRW 59
>12_02_0966 -
24906361-24906958,24907084-24907250,24907403-24907650,
24907824-24908001,24908196-24908372,24908459-24908563,
24908633-24908770,24909757-24910836
Length = 896
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 389 PLPWSLPPMASPHLTESPRPTPLMALTGSPPTALASTLGKPITTAS 526
PLP+SLP L+ P + + PPTA + +P+T +S
Sbjct: 17 PLPYSLPRAIPLDLSRIPLASLSSPTSPPPPTAPPLPVVRPLTPSS 62
>10_08_0338 + 16916429-16916650,16916728-16917900
Length = 464
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 430 YGIAAPYTAYGAYGVAPYGLGVHAW*TDHDREP 528
YG A P TAYG YG +G GV A H P
Sbjct: 275 YGHANPGTAYGNYGAGGFG-GVPAGYGGHYGNP 306
>10_06_0179 - 11508235-11508245,11508555-11508942
Length = 132
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 410 PMASPHLTESPRPTPLMALTGSPPTALASTLG--KPITTAS 526
P A+P + P P P MA PP A A T P+T AS
Sbjct: 27 PSAAPKMAPLP-PPPKMAPLPPPPAAKAPTASAPSPVTAAS 66
>03_05_0267 - 22538631-22539452
Length = 273
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 480 GGDPVSAISGVGRGDSVRCGDAIGGSDQGRG 388
GG SG G D CGD GG + G G
Sbjct: 135 GGSSGGEGSGGGSSDGEGCGDGSGGGELGGG 165
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,675,240
Number of Sequences: 37544
Number of extensions: 197565
Number of successful extensions: 1361
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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